Gene annotation
Transcriptome id Sobic.007G211000.1,Sobic.007G211000.4,Sobic.007G211000.3,Sobic.007G211000.5
Synonym Sb07g027810
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1B6PJ11 , A0A1Z5RB06
Pfam PF00010
Panther DB PTHR16223 PTHR16223:SF55
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42280 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os08g39630.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021262 , Zm00025a048358 , Zm00025a005089 , Zm00025a014892 , Zm00025a014202 , Zm00025a047441
Brachypodium KQJ98913 , PNT64830 , KQJ90745
Barley HORVU7Hr1G050530.1 , HORVU5Hr1G073140.1 , HORVU5Hr1G073140.2 , HORVU5Hr1G073140.3 , HORVU5Hr1G073170.9 , HORVU5Hr1G073170.1 , HORVU5Hr1G073170.3 , HORVU5Hr1G073170.2 , HORVU5Hr1G073170.5 , HORVU5Hr1G073170.4 , HORVU5Hr1G073170.6 , HORVU7Hr1G050530.2 , HORVU7Hr1G050530.3 , HORVU7Hr1G050530.4 , HORVU7Hr1G050530.5 , HORVU7Hr1G050530.6 , HORVU7Hr1G050530.7
Wheat TraesCS5B02G264300 , TraesCS5D02G272800 , TraesCS7B02G145800 , TraesCS7A02G245800 , TraesCS7D02G244300 , TraesCS5A02G264800
Populus -


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cDNA sequences
Sobic.007G211000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
2 Sobic.004G112500 - -
3 Sobic.010G124001 - -
4 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
5 Sobic.001G272000 - -
6 Sobic.001G243901 - -
7 Sobic.005G117901 - -
8 Sobic.004G212800 - -
9 Sobic.010G248200 KID-containing protein, putative, expressed -
10 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
11 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
12 Sobic.004G096200 - -
13 Sobic.005G130450 - -
14 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
15 Sobic.002G283300 protein kinase family protein, putative, expressed -
16 Sobic.010G218500 bZIP transcription factor domain containing protein, expressed -
17 Sobic.007G037100 MYB family transcription factor, putative, expressed -
18 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
19 Sobic.002G166700 cyclin, putative, expressed -
20 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1


Gene co-expression network
sample Sobic007G211000 Sobic007G211000 Sobic001G024200 Sobic001G024200 Sobic007G211000--Sobic001G024200 Sobic004G112500 Sobic004G112500 Sobic007G211000--Sobic004G112500 Sobic010G124001 Sobic010G124001 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic001G272000 Sobic001G272000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic004G212800 Sobic004G212800 Sobic007G211000--Sobic004G212800 Sobic010G248200 Sobic010G248200 Sobic007G211000--Sobic010G248200 Sobic001G024200--Sobic004G212800 Sobic001G024200--Sobic007G211000 Sobic001G024200--Sobic004G112500 Sobic003G204000 Sobic003G204000 Sobic001G024200--Sobic003G204000 Sobic001G024200--Sobic001G272000 Sobic004G164600 Sobic004G164600 Sobic001G024200--Sobic004G164600 SobicK009900 SobicK009900 Sobic001G024200--SobicK009900 Sobic001G439500 Sobic001G439500 Sobic001G024200--Sobic001G439500 Sobic001G024200--Sobic010G248200 Sobic004G112500--Sobic001G024200 Sobic004G112500--Sobic004G212800 Sobic004G112500--Sobic007G211000 Sobic001G543900 Sobic001G543900 Sobic004G112500--Sobic001G543900 Sobic004G112500--Sobic004G164600 Sobic004G112500--Sobic010G248200 Sobic004G112500--Sobic010G124001 Sobic008G157950 Sobic008G157950 Sobic004G112500--Sobic008G157950 Sobic008G042250 Sobic008G042250 Sobic004G112500--Sobic008G042250 Sobic010G124001--Sobic007G211000 Sobic002G203200 Sobic002G203200 Sobic010G124001--Sobic002G203200 Sobic006G088580 Sobic006G088580 Sobic010G124001--Sobic006G088580 Sobic010G124001--Sobic004G112500 Sobic006G082600 Sobic006G082600 Sobic010G124001--Sobic006G082600 Sobic001G271900 Sobic001G271900 Sobic010G124001--Sobic001G271900 Sobic010G124001--Sobic001G543900 Sobic007G037900 Sobic007G037900 Sobic010G124001--Sobic007G037900 Sobic007G037100 Sobic007G037100 Sobic010G124001--Sobic007G037100 Sobic003G117000--Sobic007G211000 Sobic002G284200 Sobic002G284200 Sobic003G117000--Sobic002G284200 Sobic007G150200 Sobic007G150200 Sobic003G117000--Sobic007G150200 Sobic003G117000--Sobic005G117901 Sobic010G218500 Sobic010G218500 Sobic003G117000--Sobic010G218500 Sobic003G117000--Sobic001G024200 Sobic003G117000--Sobic001G243901 Sobic003G121400 Sobic003G121400 Sobic003G117000--Sobic003G121400 Sobic003G036950 Sobic003G036950 Sobic003G117000--Sobic003G036950 Sobic001G272000--Sobic001G271900 Sobic001G272000--SobicK009900 Sobic001G287301 Sobic001G287301 Sobic001G272000--Sobic001G287301 Sobic001G272000--Sobic001G024200 Sobic008G049701 Sobic008G049701 Sobic001G272000--Sobic008G049701 Sobic001G272000--Sobic001G543900 Sobic001G272000--Sobic008G042250 Sobic001G272000--Sobic007G211000 Sobic005G110430 Sobic005G110430 Sobic001G272000--Sobic005G110430 Sobic001G243901--Sobic005G117901 Sobic008G101350 Sobic008G101350 Sobic001G243901--Sobic008G101350 Sobic001G345333 Sobic001G345333 Sobic001G243901--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic001G243901--Sobic002G007250 Sobic001G243901--Sobic010G248200 Sobic004G096200 Sobic004G096200 Sobic001G243901--Sobic004G096200 Sobic001G243901--Sobic010G218500 Sobic003G302701 Sobic003G302701 Sobic001G243901--Sobic003G302701 Sobic001G243901--Sobic007G211000 Sobic005G117901--Sobic001G243901 Sobic005G117901--Sobic008G101350 Sobic005G117901--Sobic004G096200 Sobic005G130450 Sobic005G130450 Sobic005G117901--Sobic005G130450 Sobic004G279300 Sobic004G279300 Sobic005G117901--Sobic004G279300 Sobic001G515600 Sobic001G515600 Sobic005G117901--Sobic001G515600 Sobic005G117901--Sobic007G211000 Sobic002G048300 Sobic002G048300 Sobic005G117901--Sobic002G048300 Sobic007G073400 Sobic007G073400 Sobic004G212800--Sobic007G073400 Sobic004G212800--Sobic004G164600 Sobic004G212800--Sobic001G024200 Sobic004G212800--Sobic001G345333 Sobic004G212800--Sobic002G007250 Sobic004G212800--Sobic010G248200 Sobic004G076732 Sobic004G076732 Sobic004G212800--Sobic004G076732 Sobic008G161401 Sobic008G161401 Sobic004G212800--Sobic008G161401 Sobic004G212800--Sobic004G112500 Sobic010G248200--Sobic002G007250 Sobic010G248200--Sobic001G345333 Sobic010G248200--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic010G248200--Sobic005G130200 Sobic002G253500 Sobic002G253500 Sobic010G248200--Sobic002G253500 Sobic010G248200--Sobic008G161401 Sobic002G108800 Sobic002G108800 Sobic010G248200--Sobic002G108800 Sobic010G248200--Sobic001G243901 Sobic010G248200--Sobic010G218500
Octagon: transcription factors


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