Gene annotation
Transcriptome id Sobic.002G166700.7,Sobic.002G166700.3,Sobic.002G166700.6,Sobic.002G166700.2,Sobic.002G166700.4,Sobic.002G166700.5
Synonym Sb02g021065
Functional annotation cyclin, putative, expressed
UniProt A0A1W0W4K9 , A0A1B6QBS7
Pfam -
Panther DB PTHR15615 PTHR15615:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05327 : Cyclin family protein
RAP-DB (Rice) LOC_Os07g12780.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a046439
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G166600 cyclin, putative, expressed -
2 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
3 Sobic.002G001600 MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.001G272000 - -
5 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1
7 Sobic.010G124001 - -
8 Sobic.001G271900 - -
9 Sobic.007G037100 MYB family transcription factor, putative, expressed -
10 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
11 Sobic.009G104300 - -
12 Sobic.004G112500 - -
13 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
14 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
15 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
16 Sobic.001G287301 - -
17 Sobic.002G283300 protein kinase family protein, putative, expressed -
18 Sobic.001G271801 - -
19 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
20 Sobic.007G178700 - -


Gene co-expression network
sample Sobic002G166700 Sobic002G166700 Sobic002G166600 Sobic002G166600 Sobic002G166700--Sobic002G166600 Sobic001G543900 Sobic001G543900 Sobic002G166700--Sobic001G543900 Sobic002G001600 Sobic002G001600 Sobic002G166700--Sobic002G001600 Sobic001G272000 Sobic001G272000 Sobic002G166700--Sobic001G272000 Sobic007G211000 Sobic007G211000 Sobic002G166700--Sobic007G211000 Sobic008G116500 Sobic008G116500 Sobic002G166700--Sobic008G116500 Sobic010G124001 Sobic010G124001 Sobic002G166700--Sobic010G124001 Sobic001G271900 Sobic001G271900 Sobic002G166700--Sobic001G271900 Sobic007G037100 Sobic007G037100 Sobic002G166700--Sobic007G037100 Sobic002G166600--Sobic002G166700 Sobic002G166600--Sobic001G543900 Sobic002G166600--Sobic002G001600 Sobic009G104300 Sobic009G104300 Sobic002G166600--Sobic009G104300 Sobic002G166600--Sobic008G116500 Sobic002G166600--Sobic001G272000 Sobic001G271801 Sobic001G271801 Sobic002G166600--Sobic001G271801 Sobic005G110427 Sobic005G110427 Sobic002G166600--Sobic005G110427 Sobic007G137900 Sobic007G137900 Sobic002G166600--Sobic007G137900 Sobic001G477800 Sobic001G477800 Sobic001G543900--Sobic001G477800 Sobic002G313300 Sobic002G313300 Sobic001G543900--Sobic002G313300 Sobic004G112500 Sobic004G112500 Sobic001G543900--Sobic004G112500 Sobic001G543900--Sobic002G001600 Sobic006G009400 Sobic006G009400 Sobic001G543900--Sobic006G009400 Sobic001G543900--Sobic002G166700 Sobic005G130200 Sobic005G130200 Sobic001G543900--Sobic005G130200 Sobic001G543900--Sobic001G272000 Sobic010G248200 Sobic010G248200 Sobic001G543900--Sobic010G248200 Sobic002G001600--Sobic008G116500 Sobic002G001600--Sobic001G543900 Sobic002G001600--Sobic002G313300 Sobic008G101800 Sobic008G101800 Sobic002G001600--Sobic008G101800 Sobic007G185900 Sobic007G185900 Sobic002G001600--Sobic007G185900 Sobic002G001600--Sobic002G166700 Sobic008G106000 Sobic008G106000 Sobic002G001600--Sobic008G106000 Sobic002G001600--Sobic007G037100 Sobic002G001600--Sobic002G166600 Sobic001G272000--Sobic001G271900 SobicK009900 SobicK009900 Sobic001G272000--SobicK009900 Sobic001G287301 Sobic001G287301 Sobic001G272000--Sobic001G287301 Sobic001G024200 Sobic001G024200 Sobic001G272000--Sobic001G024200 Sobic008G049701 Sobic008G049701 Sobic001G272000--Sobic008G049701 Sobic001G272000--Sobic001G543900 Sobic008G042250 Sobic008G042250 Sobic001G272000--Sobic008G042250 Sobic001G272000--Sobic007G211000 Sobic005G110430 Sobic005G110430 Sobic001G272000--Sobic005G110430 Sobic007G211000--Sobic001G024200 Sobic007G211000--Sobic004G112500 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic004G212800 Sobic004G212800 Sobic007G211000--Sobic004G212800 Sobic007G211000--Sobic010G248200 Sobic008G116500--Sobic002G001600 Sobic008G116500--Sobic001G543900 Sobic007G011400 Sobic007G011400 Sobic008G116500--Sobic007G011400 Sobic001G439500 Sobic001G439500 Sobic008G116500--Sobic001G439500 Sobic006G080300 Sobic006G080300 Sobic008G116500--Sobic006G080300 Sobic008G116500--Sobic007G037100 Sobic008G116500--Sobic002G313300 Sobic008G116500--Sobic001G477800 Sobic004G196700 Sobic004G196700 Sobic008G116500--Sobic004G196700 Sobic010G124001--Sobic007G211000 Sobic002G203200 Sobic002G203200 Sobic010G124001--Sobic002G203200 Sobic006G088580 Sobic006G088580 Sobic010G124001--Sobic006G088580 Sobic010G124001--Sobic004G112500 Sobic006G082600 Sobic006G082600 Sobic010G124001--Sobic006G082600 Sobic010G124001--Sobic001G271900 Sobic010G124001--Sobic001G543900 Sobic007G037900 Sobic007G037900 Sobic010G124001--Sobic007G037900 Sobic010G124001--Sobic007G037100 Sobic001G271900--Sobic001G272000 Sobic001G271900--Sobic010G124001 Sobic001G271900--Sobic001G543900 Sobic001G271900--Sobic007G211000 Sobic001G271900--Sobic001G271801 Sobic001G271900--Sobic004G112500 Sobic001G271900--Sobic002G166700 Sobic001G271900--Sobic009G104300 Sobic001G271900--Sobic001G287301 Sobic007G037100--Sobic006G082600 Sobic001G222300 Sobic001G222300 Sobic007G037100--Sobic001G222300 Sobic007G037100--Sobic008G116500 Sobic007G037100--Sobic002G001600 Sobic007G037100--Sobic010G124001 Sobic007G037100--Sobic007G211000 Sobic007G078000 Sobic007G078000 Sobic007G037100--Sobic007G078000 Sobic001G162300 Sobic001G162300 Sobic007G037100--Sobic001G162300 Sobic002G283300 Sobic002G283300 Sobic007G037100--Sobic002G283300
Octagon: transcription factors


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