Gene annotation
Transcriptome id Sobic.007G037100.1
Synonym Sb07g003170
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5YN41
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF189
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47390 : myb-like transcription factor family protein
RAP-DB (Rice) LOC_Os08g04840.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a055239
Brachypodium KQJ95037
Barley HORVU7Hr1G072890.8 , HORVU7Hr1G072890.7 , HORVU7Hr1G072890.6 , HORVU7Hr1G072890.5 , HORVU7Hr1G072890.4 , HORVU7Hr1G072890.3 , HORVU7Hr1G072890.2 , HORVU7Hr1G072890.1
Wheat TraesCS7A02G306100 , TraesCS7D02G302800 , TraesCS7B02G206300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G037100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
2 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -
3 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1
4 Sobic.002G001600 MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
5 Sobic.010G124001 - -
6 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
8 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
9 Sobic.002G283300 protein kinase family protein, putative, expressed -
10 Sobic.002G313300 bromodomain domain containing protein, expressed -
11 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
12 Sobic.002G166700 cyclin, putative, expressed -
13 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
14 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
15 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
16 Sobic.008G101800 expressed protein -
17 Sobic.005G162600 zinc knuckle domain containing protein, expressed -
18 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
19 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
20 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -


Gene co-expression network
sample Sobic007G037100 Sobic007G037100 Sobic006G082600 Sobic006G082600 Sobic007G037100--Sobic006G082600 Sobic001G222300 Sobic001G222300 Sobic007G037100--Sobic001G222300 Sobic008G116500 Sobic008G116500 Sobic007G037100--Sobic008G116500 Sobic002G001600 Sobic002G001600 Sobic007G037100--Sobic002G001600 Sobic010G124001 Sobic010G124001 Sobic007G037100--Sobic010G124001 Sobic007G211000 Sobic007G211000 Sobic007G037100--Sobic007G211000 Sobic007G078000 Sobic007G078000 Sobic007G037100--Sobic007G078000 Sobic001G162300 Sobic001G162300 Sobic007G037100--Sobic001G162300 Sobic002G283300 Sobic002G283300 Sobic007G037100--Sobic002G283300 Sobic006G082600--Sobic001G162300 Sobic007G178700 Sobic007G178700 Sobic006G082600--Sobic007G178700 Sobic006G082600--Sobic007G037100 Sobic001G251700 Sobic001G251700 Sobic006G082600--Sobic001G251700 Sobic004G196700 Sobic004G196700 Sobic006G082600--Sobic004G196700 Sobic009G134500 Sobic009G134500 Sobic006G082600--Sobic009G134500 Sobic006G082600--Sobic010G124001 Sobic009G127900 Sobic009G127900 Sobic006G082600--Sobic009G127900 Sobic002G157000 Sobic002G157000 Sobic006G082600--Sobic002G157000 Sobic001G222300--Sobic007G037100 Sobic005G162600 Sobic005G162600 Sobic001G222300--Sobic005G162600 Sobic008G101800 Sobic008G101800 Sobic001G222300--Sobic008G101800 Sobic001G222300--Sobic007G211000 Sobic004G188300 Sobic004G188300 Sobic001G222300--Sobic004G188300 Sobic001G222300--Sobic002G001600 Sobic001G451000 Sobic001G451000 Sobic001G222300--Sobic001G451000 Sobic001G222300--Sobic008G116500 Sobic002G284200 Sobic002G284200 Sobic001G222300--Sobic002G284200 Sobic008G116500--Sobic002G001600 Sobic001G543900 Sobic001G543900 Sobic008G116500--Sobic001G543900 Sobic007G011400 Sobic007G011400 Sobic008G116500--Sobic007G011400 Sobic001G439500 Sobic001G439500 Sobic008G116500--Sobic001G439500 Sobic006G080300 Sobic006G080300 Sobic008G116500--Sobic006G080300 Sobic008G116500--Sobic007G037100 Sobic002G313300 Sobic002G313300 Sobic008G116500--Sobic002G313300 Sobic001G477800 Sobic001G477800 Sobic008G116500--Sobic001G477800 Sobic008G116500--Sobic004G196700 Sobic002G001600--Sobic008G116500 Sobic002G001600--Sobic001G543900 Sobic002G001600--Sobic002G313300 Sobic002G001600--Sobic008G101800 Sobic007G185900 Sobic007G185900 Sobic002G001600--Sobic007G185900 Sobic002G166700 Sobic002G166700 Sobic002G001600--Sobic002G166700 Sobic008G106000 Sobic008G106000 Sobic002G001600--Sobic008G106000 Sobic002G001600--Sobic007G037100 Sobic002G166600 Sobic002G166600 Sobic002G001600--Sobic002G166600 Sobic010G124001--Sobic007G211000 Sobic002G203200 Sobic002G203200 Sobic010G124001--Sobic002G203200 Sobic006G088580 Sobic006G088580 Sobic010G124001--Sobic006G088580 Sobic004G112500 Sobic004G112500 Sobic010G124001--Sobic004G112500 Sobic010G124001--Sobic006G082600 Sobic001G271900 Sobic001G271900 Sobic010G124001--Sobic001G271900 Sobic010G124001--Sobic001G543900 Sobic007G037900 Sobic007G037900 Sobic010G124001--Sobic007G037900 Sobic010G124001--Sobic007G037100 Sobic001G024200 Sobic001G024200 Sobic007G211000--Sobic001G024200 Sobic007G211000--Sobic004G112500 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic001G272000 Sobic001G272000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic004G212800 Sobic004G212800 Sobic007G211000--Sobic004G212800 Sobic010G248200 Sobic010G248200 Sobic007G211000--Sobic010G248200 Sobic003G333600 Sobic003G333600 Sobic007G078000--Sobic003G333600 Sobic007G078000--Sobic004G196700 Sobic007G078000--Sobic007G185900 Sobic010G260500 Sobic010G260500 Sobic007G078000--Sobic010G260500 Sobic001G424700 Sobic001G424700 Sobic007G078000--Sobic001G424700 Sobic005G149500 Sobic005G149500 Sobic007G078000--Sobic005G149500 Sobic001G372700 Sobic001G372700 Sobic007G078000--Sobic001G372700 Sobic007G078000--Sobic001G451000 Sobic007G078000--Sobic006G082600 Sobic001G162300--Sobic002G157000 Sobic006G246900 Sobic006G246900 Sobic001G162300--Sobic006G246900 Sobic003G268300 Sobic003G268300 Sobic001G162300--Sobic003G268300 Sobic001G162300--Sobic007G178700 Sobic001G162300--Sobic006G082600 Sobic001G162300--Sobic007G011400 Sobic001G094000 Sobic001G094000 Sobic001G162300--Sobic001G094000 Sobic003G170100 Sobic003G170100 Sobic001G162300--Sobic003G170100 Sobic001G162300--Sobic001G477800 Sobic009G156000 Sobic009G156000 Sobic002G283300--Sobic009G156000 Sobic010G263800 Sobic010G263800 Sobic002G283300--Sobic010G263800 Sobic002G283300--Sobic004G212800 Sobic004G143700 Sobic004G143700 Sobic002G283300--Sobic004G143700 Sobic006G009400 Sobic006G009400 Sobic002G283300--Sobic006G009400 SobicK016900 SobicK016900 Sobic002G283300--SobicK016900 Sobic001G287301 Sobic001G287301 Sobic002G283300--Sobic001G287301 Sobic002G283300--Sobic010G248200 Sobic005G130200 Sobic005G130200 Sobic002G283300--Sobic005G130200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.