Gene annotation
Transcriptome id Sobic.002G165300.2,Sobic.002G165300.1
Synonym Sb02g020870, TRFL5
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt A0A1B6QBT9 , C5X927
Pfam PF00249
Panther DB PTHR21717
NCBI CDD -
KEGG Orthology K11111; TERF2, telomeric repeat-binding factor 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15720 : TRF-like 5
RAP-DB (Rice) LOC_Os06g08290.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a041691 , Zm00025a015410 , Zm00025a049800
Brachypodium KQK19305
Barley -
Wheat TraesCS7B02G047400 , TraesCS7A02G145200 , TraesCS7D02G146500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
2 Sobic.004G196700 expressed protein -
3 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
4 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.010G199600 hydrolase, NUDIX family, domain containing protein, expressed -
6 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
7 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
8 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26
9 Sobic.007G037100 MYB family transcription factor, putative, expressed -
10 Sobic.005G028400 "Ca ATPase, IIB type"(PubMedID : 22196357)@Autoihibited Ca2+ - ATPase 11(PubMedID : 26320239)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
11 Sobic.002G283300 protein kinase family protein, putative, expressed -
12 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
13 Sobic.004G188400 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
14 Sobic.002G203200 - -
15 Sobic.006G060100 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
16 Sobic.002G115801 - -
17 Sobic.003G093600 methyltransferase, putative, expressed -
18 Sobic.002G300400 serine/threonine-protein kinase CTR1, putative, expressed -
19 Sobic.010G124001 - -
20 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -


Gene co-expression network
sample Sobic002G165300 Sobic002G165300 Sobic009G156000 Sobic009G156000 Sobic002G165300--Sobic009G156000 Sobic004G196700 Sobic004G196700 Sobic002G165300--Sobic004G196700 Sobic005G149500 Sobic005G149500 Sobic002G165300--Sobic005G149500 Sobic007G211000 Sobic007G211000 Sobic002G165300--Sobic007G211000 Sobic010G199600 Sobic010G199600 Sobic002G165300--Sobic010G199600 Sobic007G078000 Sobic007G078000 Sobic002G165300--Sobic007G078000 Sobic002G284200 Sobic002G284200 Sobic002G165300--Sobic002G284200 Sobic010G026400 Sobic010G026400 Sobic002G165300--Sobic010G026400 Sobic007G037100 Sobic007G037100 Sobic002G165300--Sobic007G037100 Sobic002G283300 Sobic002G283300 Sobic009G156000--Sobic002G283300 Sobic005G028400 Sobic005G028400 Sobic009G156000--Sobic005G028400 Sobic003G093600 Sobic003G093600 Sobic009G156000--Sobic003G093600 Sobic008G161401 Sobic008G161401 Sobic009G156000--Sobic008G161401 Sobic005G130200 Sobic005G130200 Sobic009G156000--Sobic005G130200 Sobic009G156000--Sobic002G165300 Sobic001G479500 Sobic001G479500 Sobic009G156000--Sobic001G479500 Sobic010G248200 Sobic010G248200 Sobic009G156000--Sobic010G248200 Sobic004G143700 Sobic004G143700 Sobic009G156000--Sobic004G143700 Sobic007G185900 Sobic007G185900 Sobic004G196700--Sobic007G185900 Sobic004G196700--Sobic007G078000 Sobic004G196700--Sobic005G149500 Sobic007G137900 Sobic007G137900 Sobic004G196700--Sobic007G137900 Sobic002G157300 Sobic002G157300 Sobic004G196700--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic004G196700--Sobic003G187400 Sobic001G477800 Sobic001G477800 Sobic004G196700--Sobic001G477800 Sobic006G082600 Sobic006G082600 Sobic004G196700--Sobic006G082600 Sobic009G040700 Sobic009G040700 Sobic004G196700--Sobic009G040700 Sobic005G149500--Sobic003G187400 Sobic005G149500--Sobic002G157300 Sobic005G149500--Sobic009G040700 Sobic005G149500--Sobic004G196700 Sobic007G011400 Sobic007G011400 Sobic005G149500--Sobic007G011400 Sobic006G060100 Sobic006G060100 Sobic005G149500--Sobic006G060100 Sobic005G149500--Sobic007G185900 Sobic005G149500--Sobic007G137900 Sobic005G149500--Sobic007G078000 Sobic001G024200 Sobic001G024200 Sobic007G211000--Sobic001G024200 Sobic004G112500 Sobic004G112500 Sobic007G211000--Sobic004G112500 Sobic010G124001 Sobic010G124001 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic001G272000 Sobic001G272000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic004G212800 Sobic004G212800 Sobic007G211000--Sobic004G212800 Sobic007G211000--Sobic010G248200 Sobic010G199600--Sobic002G165300 Sobic010G199600--Sobic009G156000 Sobic010G199600--Sobic007G078000 Sobic010G199600--Sobic005G149500 Sobic010G199600--Sobic002G284200 Sobic006G122400 Sobic006G122400 Sobic010G199600--Sobic006G122400 Sobic010G199600--Sobic010G026400 Sobic010G199600--Sobic007G037100 Sobic006G209500 Sobic006G209500 Sobic010G199600--Sobic006G209500 Sobic003G333600 Sobic003G333600 Sobic007G078000--Sobic003G333600 Sobic007G078000--Sobic004G196700 Sobic007G078000--Sobic007G185900 Sobic010G260500 Sobic010G260500 Sobic007G078000--Sobic010G260500 Sobic001G424700 Sobic001G424700 Sobic007G078000--Sobic001G424700 Sobic007G078000--Sobic005G149500 Sobic001G372700 Sobic001G372700 Sobic007G078000--Sobic001G372700 Sobic001G451000 Sobic001G451000 Sobic007G078000--Sobic001G451000 Sobic007G078000--Sobic006G082600 Sobic002G284200--Sobic003G117000 Sobic007G150200 Sobic007G150200 Sobic002G284200--Sobic007G150200 Sobic002G284200--Sobic001G451000 Sobic002G284200--Sobic007G211000 Sobic002G284200--Sobic003G093600 Sobic002G284200--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic002G284200--Sobic001G439500 Sobic002G284200--Sobic002G165300 Sobic002G284200--Sobic002G283300 Sobic003G012500 Sobic003G012500 Sobic010G026400--Sobic003G012500 Sobic010G026400--Sobic002G157300 Sobic009G127900 Sobic009G127900 Sobic010G026400--Sobic009G127900 Sobic006G009400 Sobic006G009400 Sobic010G026400--Sobic006G009400 Sobic010G026400--Sobic007G011400 Sobic003G261300 Sobic003G261300 Sobic010G026400--Sobic003G261300 Sobic010G263800 Sobic010G263800 Sobic010G026400--Sobic010G263800 Sobic010G026400--Sobic005G149500 Sobic010G026400--Sobic003G187400 Sobic007G037100--Sobic006G082600 Sobic001G222300 Sobic001G222300 Sobic007G037100--Sobic001G222300 Sobic008G116500 Sobic008G116500 Sobic007G037100--Sobic008G116500 Sobic002G001600 Sobic002G001600 Sobic007G037100--Sobic002G001600 Sobic007G037100--Sobic010G124001 Sobic007G037100--Sobic007G211000 Sobic007G037100--Sobic007G078000 Sobic001G162300 Sobic001G162300 Sobic007G037100--Sobic001G162300 Sobic007G037100--Sobic002G283300
Octagon: transcription factors


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