Gene annotation
Transcriptome id Sobic.002G203200.2,Sobic.002G203200.1
Synonym
Functional annotation -
UniProt A0A1B6QCJ6 , A0A1B6QCJ3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G124001 - -
2 Sobic.007G037900 oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed -
3 Sobic.001G067850 - -
4 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
5 Sobic.009G140500 no apical meristem protein, putative, expressed -
6 Sobic.005G130200 - -
7 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
8 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.004G196700 expressed protein -
10 Sobic.005G110472 - -
11 Sobic.003G268300 surp module family protein, putative, expressed -
12 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
13 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
14 Sobic.010G146700 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
15 Sobic.004G188400 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
16 Sobic.001G372700 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
17 Sobic.007G096600 - -
18 Sobic.010G123901 - -
19 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
20 Sobic.007G037100 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic002G203200 Sobic002G203200 Sobic010G124001 Sobic010G124001 Sobic002G203200--Sobic010G124001 Sobic007G037900 Sobic007G037900 Sobic002G203200--Sobic007G037900 Sobic001G067850 Sobic001G067850 Sobic002G203200--Sobic001G067850 Sobic006G082600 Sobic006G082600 Sobic002G203200--Sobic006G082600 Sobic009G140500 Sobic009G140500 Sobic002G203200--Sobic009G140500 Sobic005G130200 Sobic005G130200 Sobic002G203200--Sobic005G130200 Sobic002G165300 Sobic002G165300 Sobic002G203200--Sobic002G165300 Sobic007G211000 Sobic007G211000 Sobic002G203200--Sobic007G211000 Sobic004G196700 Sobic004G196700 Sobic002G203200--Sobic004G196700 Sobic010G124001--Sobic007G211000 Sobic010G124001--Sobic002G203200 Sobic006G088580 Sobic006G088580 Sobic010G124001--Sobic006G088580 Sobic004G112500 Sobic004G112500 Sobic010G124001--Sobic004G112500 Sobic010G124001--Sobic006G082600 Sobic001G271900 Sobic001G271900 Sobic010G124001--Sobic001G271900 Sobic001G543900 Sobic001G543900 Sobic010G124001--Sobic001G543900 Sobic010G124001--Sobic007G037900 Sobic007G037100 Sobic007G037100 Sobic010G124001--Sobic007G037100 Sobic003G268300 Sobic003G268300 Sobic007G037900--Sobic003G268300 Sobic001G420200 Sobic001G420200 Sobic007G037900--Sobic001G420200 Sobic006G246900 Sobic006G246900 Sobic007G037900--Sobic006G246900 Sobic002G144933 Sobic002G144933 Sobic007G037900--Sobic002G144933 Sobic001G274200 Sobic001G274200 Sobic007G037900--Sobic001G274200 Sobic009G127900 Sobic009G127900 Sobic007G037900--Sobic009G127900 Sobic001G162300 Sobic001G162300 Sobic007G037900--Sobic001G162300 Sobic004G290800 Sobic004G290800 Sobic007G037900--Sobic004G290800 Sobic002G157000 Sobic002G157000 Sobic007G037900--Sobic002G157000 Sobic002G243900 Sobic002G243900 Sobic001G067850--Sobic002G243900 Sobic007G178700 Sobic007G178700 Sobic001G067850--Sobic007G178700 Sobic001G067850--Sobic001G274200 Sobic001G067850--Sobic009G140500 Sobic001G067850--Sobic001G420200 Sobic005G144400 Sobic005G144400 Sobic001G067850--Sobic005G144400 Sobic007G096600 Sobic007G096600 Sobic001G067850--Sobic007G096600 Sobic001G067850--Sobic007G037900 Sobic001G067850--Sobic006G088580 Sobic006G082600--Sobic001G162300 Sobic006G082600--Sobic007G178700 Sobic006G082600--Sobic007G037100 Sobic001G251700 Sobic001G251700 Sobic006G082600--Sobic001G251700 Sobic006G082600--Sobic004G196700 Sobic009G134500 Sobic009G134500 Sobic006G082600--Sobic009G134500 Sobic006G082600--Sobic010G124001 Sobic006G082600--Sobic009G127900 Sobic006G082600--Sobic002G157000 Sobic009G140500--Sobic001G274200 Sobic009G140500--Sobic001G067850 Sobic010G123901 Sobic010G123901 Sobic009G140500--Sobic010G123901 Sobic009G140500--Sobic007G037900 Sobic009G140500--Sobic004G290800 Sobic009G140500--Sobic001G420200 Sobic003G179201 Sobic003G179201 Sobic009G140500--Sobic003G179201 Sobic009G140500--Sobic002G203200 Sobic009G140500--Sobic007G096600 Sobic010G248200 Sobic010G248200 Sobic005G130200--Sobic010G248200 Sobic001G479500 Sobic001G479500 Sobic005G130200--Sobic001G479500 Sobic005G130200--Sobic001G543900 Sobic008G161401 Sobic008G161401 Sobic005G130200--Sobic008G161401 Sobic009G156000 Sobic009G156000 Sobic005G130200--Sobic009G156000 Sobic002G283300 Sobic002G283300 Sobic005G130200--Sobic002G283300 Sobic004G212800 Sobic004G212800 Sobic005G130200--Sobic004G212800 Sobic003G057800 Sobic003G057800 Sobic005G130200--Sobic003G057800 Sobic001G477800 Sobic001G477800 Sobic005G130200--Sobic001G477800 Sobic002G165300--Sobic009G156000 Sobic002G165300--Sobic004G196700 Sobic005G149500 Sobic005G149500 Sobic002G165300--Sobic005G149500 Sobic002G165300--Sobic007G211000 Sobic010G199600 Sobic010G199600 Sobic002G165300--Sobic010G199600 Sobic007G078000 Sobic007G078000 Sobic002G165300--Sobic007G078000 Sobic002G284200 Sobic002G284200 Sobic002G165300--Sobic002G284200 Sobic010G026400 Sobic010G026400 Sobic002G165300--Sobic010G026400 Sobic002G165300--Sobic007G037100 Sobic001G024200 Sobic001G024200 Sobic007G211000--Sobic001G024200 Sobic007G211000--Sobic004G112500 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic001G272000 Sobic001G272000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic007G211000--Sobic004G212800 Sobic007G211000--Sobic010G248200 Sobic007G185900 Sobic007G185900 Sobic004G196700--Sobic007G185900 Sobic004G196700--Sobic007G078000 Sobic004G196700--Sobic005G149500 Sobic007G137900 Sobic007G137900 Sobic004G196700--Sobic007G137900 Sobic002G157300 Sobic002G157300 Sobic004G196700--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic004G196700--Sobic003G187400 Sobic004G196700--Sobic001G477800 Sobic004G196700--Sobic006G082600 Sobic009G040700 Sobic009G040700 Sobic004G196700--Sobic009G040700
Octagon: transcription factors


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