Gene annotation
Transcriptome id Sobic.010G146700.1
Synonym Sb10g019640
Functional annotation transmembrane amino acid transporter protein, putative, expressed
UniProt C5Z358
Pfam PF03222
Panther DB PTHR22950 PTHR22950:SF240
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology K15015; SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
Gene Ontology GO:0003333; amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT2G39130 : Transmembrane amino acid transporter family protein
RAP-DB (Rice) LOC_Os02g01100.2 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a042384 , Zm00025a053651
Brachypodium PNT65651
Barley HORVU6Hr1G001480.10 , HORVU6Hr1G001480.9 , HORVU6Hr1G001480.8 , HORVU6Hr1G001480.7 , HORVU6Hr1G001480.6 , HORVU6Hr1G001480.5 , HORVU6Hr1G001480.4 , HORVU6Hr1G001480.3 , HORVU6Hr1G001480.2 , HORVU6Hr1G001480.1
Wheat TraesCS6A02G002400 , TraesCS6D02G003200
Populus -


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cDNA sequences
Sobic.010G146700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
2 Sobic.001G046600 cycloartenol-C-24-methyltransferase 1, putative, expressed -
3 Sobic.004G016500 PPR repeat domain containing protein, putative, expressed -
4 Sobic.005G130200 - -
5 Sobic.004G212800 - -
6 Sobic.008G167300 NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.004G112500 - -
8 Sobic.010G248200 KID-containing protein, putative, expressed -
9 Sobic.002G283300 protein kinase family protein, putative, expressed -
10 Sobic.008G161401 - -
11 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
12 Sobic.002G150766 - -
13 Sobic.008G041700 TLD family protein, putative, expressed -
14 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
16 Sobic.010G124001 - -
17 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
18 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
19 Sobic.004G164600 - -
20 Sobic.003G057800 rho termination factor, N-terminal domain containing protein, expressed -


Gene co-expression network
sample Sobic010G146700 Sobic010G146700 Sobic001G479500 Sobic001G479500 Sobic010G146700--Sobic001G479500 Sobic001G046600 Sobic001G046600 Sobic010G146700--Sobic001G046600 Sobic004G016500 Sobic004G016500 Sobic010G146700--Sobic004G016500 Sobic005G130200 Sobic005G130200 Sobic010G146700--Sobic005G130200 Sobic004G212800 Sobic004G212800 Sobic010G146700--Sobic004G212800 Sobic008G167300 Sobic008G167300 Sobic010G146700--Sobic008G167300 Sobic004G112500 Sobic004G112500 Sobic010G146700--Sobic004G112500 Sobic010G248200 Sobic010G248200 Sobic010G146700--Sobic010G248200 Sobic002G283300 Sobic002G283300 Sobic010G146700--Sobic002G283300 Sobic003G057800 Sobic003G057800 Sobic001G479500--Sobic003G057800 Sobic001G479500--Sobic005G130200 Sobic001G479500--Sobic010G248200 Sobic008G161401 Sobic008G161401 Sobic001G479500--Sobic008G161401 Sobic009G156000 Sobic009G156000 Sobic001G479500--Sobic009G156000 Sobic001G543900 Sobic001G543900 Sobic001G479500--Sobic001G543900 Sobic005G187200 Sobic005G187200 Sobic001G479500--Sobic005G187200 Sobic001G479500--Sobic002G283300 Sobic001G479500--Sobic004G212800 Sobic001G046600--Sobic004G016500 Sobic001G046600--Sobic004G212800 Sobic004G164600 Sobic004G164600 Sobic001G046600--Sobic004G164600 Sobic007G073400 Sobic007G073400 Sobic001G046600--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic001G046600--Sobic003G424100 Sobic001G046600--Sobic004G112500 Sobic001G046600--Sobic008G167300 Sobic008G157950 Sobic008G157950 Sobic001G046600--Sobic008G157950 Sobic008G176732 Sobic008G176732 Sobic001G046600--Sobic008G176732 Sobic004G016500--Sobic001G046600 Sobic002G150766 Sobic002G150766 Sobic004G016500--Sobic002G150766 Sobic002G330400 Sobic002G330400 Sobic004G016500--Sobic002G330400 Sobic004G016500--Sobic008G167300 Sobic004G016500--Sobic004G212800 Sobic004G016500--Sobic003G057800 Sobic004G016500--Sobic001G479500 Sobic004G016500--Sobic004G164600 Sobic004G016500--Sobic003G424100 Sobic005G130200--Sobic010G248200 Sobic005G130200--Sobic001G479500 Sobic005G130200--Sobic001G543900 Sobic005G130200--Sobic008G161401 Sobic005G130200--Sobic009G156000 Sobic005G130200--Sobic002G283300 Sobic005G130200--Sobic004G212800 Sobic005G130200--Sobic003G057800 Sobic001G477800 Sobic001G477800 Sobic005G130200--Sobic001G477800 Sobic004G212800--Sobic007G073400 Sobic004G212800--Sobic004G164600 Sobic001G024200 Sobic001G024200 Sobic004G212800--Sobic001G024200 Sobic001G345333 Sobic001G345333 Sobic004G212800--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic004G212800--Sobic002G007250 Sobic004G212800--Sobic010G248200 Sobic004G076732 Sobic004G076732 Sobic004G212800--Sobic004G076732 Sobic004G212800--Sobic008G161401 Sobic004G212800--Sobic004G112500 Sobic008G167300--Sobic004G212800 Sobic008G167300--Sobic004G016500 Sobic008G167300--Sobic001G046600 Sobic008G167300--Sobic001G024200 Sobic008G167300--Sobic008G161401 Sobic008G167300--Sobic004G164600 Sobic008G167300--Sobic004G112500 Sobic008G167300--Sobic002G007250 Sobic008G167300--Sobic003G424100 Sobic004G112500--Sobic001G024200 Sobic004G112500--Sobic004G212800 Sobic007G211000 Sobic007G211000 Sobic004G112500--Sobic007G211000 Sobic004G112500--Sobic001G543900 Sobic004G112500--Sobic004G164600 Sobic004G112500--Sobic010G248200 Sobic010G124001 Sobic010G124001 Sobic004G112500--Sobic010G124001 Sobic004G112500--Sobic008G157950 Sobic008G042250 Sobic008G042250 Sobic004G112500--Sobic008G042250 Sobic010G248200--Sobic002G007250 Sobic010G248200--Sobic001G345333 Sobic010G248200--Sobic004G212800 Sobic010G248200--Sobic005G130200 Sobic002G253500 Sobic002G253500 Sobic010G248200--Sobic002G253500 Sobic010G248200--Sobic008G161401 Sobic002G108800 Sobic002G108800 Sobic010G248200--Sobic002G108800 Sobic001G243901 Sobic001G243901 Sobic010G248200--Sobic001G243901 Sobic010G218500 Sobic010G218500 Sobic010G248200--Sobic010G218500 Sobic002G283300--Sobic009G156000 Sobic010G263800 Sobic010G263800 Sobic002G283300--Sobic010G263800 Sobic002G283300--Sobic004G212800 Sobic004G143700 Sobic004G143700 Sobic002G283300--Sobic004G143700 Sobic006G009400 Sobic006G009400 Sobic002G283300--Sobic006G009400 SobicK016900 SobicK016900 Sobic002G283300--SobicK016900 Sobic001G287301 Sobic001G287301 Sobic002G283300--Sobic001G287301 Sobic002G283300--Sobic010G248200 Sobic002G283300--Sobic005G130200
Octagon: transcription factors


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