Gene annotation
Transcriptome id Sobic.001G024200.1
Synonym Sb01g002300
Functional annotation lipase class 3 family protein, putative, expressed
UniProt C5WTZ4
Pfam PF01764
Panther DB PTHR21493 PTHR21493:SF100
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G16070 : Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3
RAP-DB (Rice) LOC_Os03g61540.1 : lipase class 3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a016379
Brachypodium KQK12338 , PNT73859 , PNT73860
Barley HORVU5Hr1G115820.8 , HORVU5Hr1G115820.9 , HORVU5Hr1G115820.6 , HORVU5Hr1G115820.4 , HORVU5Hr1G115820.5 , HORVU5Hr1G115820.7 , HORVU5Hr1G115820.10
Wheat TraesCS5D02G508200 , TraesCS4A02G365200 , TraesCS5B02G508200
Populus -


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cDNA sequences
Sobic.001G024200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G212800 - -
2 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.004G112500 - -
4 Sobic.003G204000 expressed protein -
5 Sobic.001G272000 - -
6 Sobic.004G164600 - -
7 Sobic.K009900 autophagy-related protein 8D, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
8 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
9 Sobic.010G248200 KID-containing protein, putative, expressed -
10 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
11 Sobic.001G345333 - -
12 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
13 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
14 Sobic.001G243901 - -
15 Sobic.004G076732 - K14800: pre-rRNA-processing protein TSR2
16 Sobic.008G161401 - -
17 Sobic.002G007250 - -
18 Sobic.008G167300 NBS-LRR disease resistance protein, putative, expressed -
19 Sobic.002G253500 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
20 Sobic.002G221900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase


Gene co-expression network
sample Sobic001G024200 Sobic001G024200 Sobic004G212800 Sobic004G212800 Sobic001G024200--Sobic004G212800 Sobic007G211000 Sobic007G211000 Sobic001G024200--Sobic007G211000 Sobic004G112500 Sobic004G112500 Sobic001G024200--Sobic004G112500 Sobic003G204000 Sobic003G204000 Sobic001G024200--Sobic003G204000 Sobic001G272000 Sobic001G272000 Sobic001G024200--Sobic001G272000 Sobic004G164600 Sobic004G164600 Sobic001G024200--Sobic004G164600 SobicK009900 SobicK009900 Sobic001G024200--SobicK009900 Sobic001G439500 Sobic001G439500 Sobic001G024200--Sobic001G439500 Sobic010G248200 Sobic010G248200 Sobic001G024200--Sobic010G248200 Sobic007G073400 Sobic007G073400 Sobic004G212800--Sobic007G073400 Sobic004G212800--Sobic004G164600 Sobic004G212800--Sobic001G024200 Sobic001G345333 Sobic001G345333 Sobic004G212800--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic004G212800--Sobic002G007250 Sobic004G212800--Sobic010G248200 Sobic004G076732 Sobic004G076732 Sobic004G212800--Sobic004G076732 Sobic008G161401 Sobic008G161401 Sobic004G212800--Sobic008G161401 Sobic004G212800--Sobic004G112500 Sobic007G211000--Sobic001G024200 Sobic007G211000--Sobic004G112500 Sobic010G124001 Sobic010G124001 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic007G211000--Sobic004G212800 Sobic007G211000--Sobic010G248200 Sobic004G112500--Sobic001G024200 Sobic004G112500--Sobic004G212800 Sobic004G112500--Sobic007G211000 Sobic001G543900 Sobic001G543900 Sobic004G112500--Sobic001G543900 Sobic004G112500--Sobic004G164600 Sobic004G112500--Sobic010G248200 Sobic004G112500--Sobic010G124001 Sobic008G157950 Sobic008G157950 Sobic004G112500--Sobic008G157950 Sobic008G042250 Sobic008G042250 Sobic004G112500--Sobic008G042250 Sobic003G204000--Sobic001G024200 Sobic008G068800 Sobic008G068800 Sobic003G204000--Sobic008G068800 Sobic003G204000--Sobic004G212800 Sobic008G116500 Sobic008G116500 Sobic003G204000--Sobic008G116500 Sobic004G169501 Sobic004G169501 Sobic003G204000--Sobic004G169501 Sobic003G204000--Sobic001G543900 Sobic003G204000--Sobic004G112500 Sobic002G297800 Sobic002G297800 Sobic003G204000--Sobic002G297800 Sobic003G315332 Sobic003G315332 Sobic003G204000--Sobic003G315332 Sobic001G271900 Sobic001G271900 Sobic001G272000--Sobic001G271900 Sobic001G272000--SobicK009900 Sobic001G287301 Sobic001G287301 Sobic001G272000--Sobic001G287301 Sobic001G272000--Sobic001G024200 Sobic008G049701 Sobic008G049701 Sobic001G272000--Sobic008G049701 Sobic001G272000--Sobic001G543900 Sobic001G272000--Sobic008G042250 Sobic001G272000--Sobic007G211000 Sobic005G110430 Sobic005G110430 Sobic001G272000--Sobic005G110430 Sobic004G164600--Sobic004G212800 Sobic004G164600--Sobic005G110430 Sobic004G164600--Sobic007G073400 Sobic004G164600--Sobic008G042250 Sobic004G164600--Sobic008G157950 Sobic004G164600--Sobic001G345333 Sobic004G164600--Sobic002G007250 Sobic004G164600--SobicK009900 Sobic004G164600--Sobic004G076732 SobicK009900--Sobic004G076732 SobicK009900--Sobic005G110430 Sobic001G253100 Sobic001G253100 SobicK009900--Sobic001G253100 SobicK009900--Sobic008G042250 SobicK009900--Sobic008G049701 Sobic002G410200 Sobic002G410200 SobicK009900--Sobic002G410200 SobicK009900--Sobic001G287301 Sobic005G117801 Sobic005G117801 SobicK009900--Sobic005G117801 Sobic009G209800 Sobic009G209800 SobicK009900--Sobic009G209800 Sobic001G439500--Sobic001G024200 Sobic004G143700 Sobic004G143700 Sobic001G439500--Sobic004G143700 Sobic001G439500--Sobic007G211000 Sobic001G439500--Sobic008G116500 Sobic001G439500--Sobic004G112500 Sobic001G451000 Sobic001G451000 Sobic001G439500--Sobic001G451000 Sobic001G439500--Sobic001G543900 Sobic002G001600 Sobic002G001600 Sobic001G439500--Sobic002G001600 Sobic002G283300 Sobic002G283300 Sobic001G439500--Sobic002G283300 Sobic010G248200--Sobic002G007250 Sobic010G248200--Sobic001G345333 Sobic010G248200--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic010G248200--Sobic005G130200 Sobic002G253500 Sobic002G253500 Sobic010G248200--Sobic002G253500 Sobic010G248200--Sobic008G161401 Sobic002G108800 Sobic002G108800 Sobic010G248200--Sobic002G108800 Sobic010G248200--Sobic001G243901 Sobic010G218500 Sobic010G218500 Sobic010G248200--Sobic010G218500
Octagon: transcription factors


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