Gene annotation
Transcriptome id Sobic.004G143700.1
Synonym Sb04g018090
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C5Y185
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF279
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT3G02750 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os02g27220.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a020311 , Zm00025a034261
Brachypodium KQJ99463
Barley HORVU6Hr1G043680.3 , HORVU6Hr1G043680.2 , HORVU6Hr1G043680.1 , HORVU6Hr1G043680.7 , HORVU6Hr1G043680.6 , HORVU6Hr1G043680.5 , HORVU6Hr1G043680.4 , HORVU6Hr1G043680.8
Wheat TraesCS6A02G193100 , TraesCS6B02G229600 , TraesCS6D02G181000
Populus -


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cDNA sequences
Sobic.004G143700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
2 Sobic.007G023700 MA3 domain containing protein, expressed -
3 Sobic.004G212800 - -
4 Sobic.002G283300 protein kinase family protein, putative, expressed -
5 Sobic.010G248200 KID-containing protein, putative, expressed -
6 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
7 Sobic.003G093600 methyltransferase, putative, expressed -
8 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
9 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
10 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
11 Sobic.004G164600 - -
12 Sobic.001G347600 paramyosin, putative, expressed -
13 Sobic.008G042250 - -
14 Sobic.004G112500 - -
15 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
16 Sobic.008G157950 - -
17 Sobic.005G110430 - -
18 Sobic.009G110366 - -
19 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
20 Sobic.K016900 arginyl-tRNA--protein transferase 1, putative, expressed -


Gene co-expression network
sample Sobic004G143700 Sobic004G143700 Sobic007G073400 Sobic007G073400 Sobic004G143700--Sobic007G073400 Sobic007G023700 Sobic007G023700 Sobic004G143700--Sobic007G023700 Sobic004G212800 Sobic004G212800 Sobic004G143700--Sobic004G212800 Sobic002G283300 Sobic002G283300 Sobic004G143700--Sobic002G283300 Sobic010G248200 Sobic010G248200 Sobic004G143700--Sobic010G248200 Sobic001G024200 Sobic001G024200 Sobic004G143700--Sobic001G024200 Sobic003G093600 Sobic003G093600 Sobic004G143700--Sobic003G093600 Sobic001G439500 Sobic001G439500 Sobic004G143700--Sobic001G439500 Sobic001G543900 Sobic001G543900 Sobic004G143700--Sobic001G543900 Sobic007G073400--Sobic004G212800 Sobic004G164600 Sobic004G164600 Sobic007G073400--Sobic004G164600 Sobic004G076732 Sobic004G076732 Sobic007G073400--Sobic004G076732 Sobic008G009500 Sobic008G009500 Sobic007G073400--Sobic008G009500 Sobic009G113600 Sobic009G113600 Sobic007G073400--Sobic009G113600 Sobic008G031350 Sobic008G031350 Sobic007G073400--Sobic008G031350 Sobic008G042250 Sobic008G042250 Sobic007G073400--Sobic008G042250 Sobic005G110430 Sobic005G110430 Sobic007G073400--Sobic005G110430 Sobic007G073400--Sobic004G143700 Sobic007G023700--Sobic003G093600 Sobic002G039500 Sobic002G039500 Sobic007G023700--Sobic002G039500 Sobic009G180200 Sobic009G180200 Sobic007G023700--Sobic009G180200 Sobic007G023700--Sobic004G143700 Sobic002G108800 Sobic002G108800 Sobic007G023700--Sobic002G108800 Sobic002G221900 Sobic002G221900 Sobic007G023700--Sobic002G221900 Sobic007G156500 Sobic007G156500 Sobic007G023700--Sobic007G156500 Sobic001G347600 Sobic001G347600 Sobic007G023700--Sobic001G347600 Sobic006G184300 Sobic006G184300 Sobic007G023700--Sobic006G184300 Sobic004G212800--Sobic007G073400 Sobic004G212800--Sobic004G164600 Sobic004G212800--Sobic001G024200 Sobic001G345333 Sobic001G345333 Sobic004G212800--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic004G212800--Sobic002G007250 Sobic004G212800--Sobic010G248200 Sobic004G212800--Sobic004G076732 Sobic008G161401 Sobic008G161401 Sobic004G212800--Sobic008G161401 Sobic004G112500 Sobic004G112500 Sobic004G212800--Sobic004G112500 Sobic009G156000 Sobic009G156000 Sobic002G283300--Sobic009G156000 Sobic010G263800 Sobic010G263800 Sobic002G283300--Sobic010G263800 Sobic002G283300--Sobic004G212800 Sobic002G283300--Sobic004G143700 Sobic006G009400 Sobic006G009400 Sobic002G283300--Sobic006G009400 SobicK016900 SobicK016900 Sobic002G283300--SobicK016900 Sobic001G287301 Sobic001G287301 Sobic002G283300--Sobic001G287301 Sobic002G283300--Sobic010G248200 Sobic005G130200 Sobic005G130200 Sobic002G283300--Sobic005G130200 Sobic010G248200--Sobic002G007250 Sobic010G248200--Sobic001G345333 Sobic010G248200--Sobic004G212800 Sobic010G248200--Sobic005G130200 Sobic002G253500 Sobic002G253500 Sobic010G248200--Sobic002G253500 Sobic010G248200--Sobic008G161401 Sobic010G248200--Sobic002G108800 Sobic001G243901 Sobic001G243901 Sobic010G248200--Sobic001G243901 Sobic010G218500 Sobic010G218500 Sobic010G248200--Sobic010G218500 Sobic001G024200--Sobic004G212800 Sobic007G211000 Sobic007G211000 Sobic001G024200--Sobic007G211000 Sobic001G024200--Sobic004G112500 Sobic003G204000 Sobic003G204000 Sobic001G024200--Sobic003G204000 Sobic001G272000 Sobic001G272000 Sobic001G024200--Sobic001G272000 Sobic001G024200--Sobic004G164600 SobicK009900 SobicK009900 Sobic001G024200--SobicK009900 Sobic001G024200--Sobic001G439500 Sobic001G024200--Sobic010G248200 Sobic003G093600--Sobic007G023700 Sobic009G022200 Sobic009G022200 Sobic003G093600--Sobic009G022200 Sobic004G271900 Sobic004G271900 Sobic003G093600--Sobic004G271900 Sobic007G205800 Sobic007G205800 Sobic003G093600--Sobic007G205800 Sobic003G093600--Sobic004G143700 Sobic003G093600--Sobic009G156000 Sobic009G087800 Sobic009G087800 Sobic003G093600--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G093600--Sobic003G258400 Sobic001G424700 Sobic001G424700 Sobic003G093600--Sobic001G424700 Sobic001G439500--Sobic001G024200 Sobic001G439500--Sobic004G143700 Sobic001G439500--Sobic007G211000 Sobic008G116500 Sobic008G116500 Sobic001G439500--Sobic008G116500 Sobic001G439500--Sobic004G112500 Sobic001G451000 Sobic001G451000 Sobic001G439500--Sobic001G451000 Sobic001G439500--Sobic001G543900 Sobic002G001600 Sobic002G001600 Sobic001G439500--Sobic002G001600 Sobic001G439500--Sobic002G283300 Sobic001G477800 Sobic001G477800 Sobic001G543900--Sobic001G477800 Sobic002G313300 Sobic002G313300 Sobic001G543900--Sobic002G313300 Sobic001G543900--Sobic004G112500 Sobic001G543900--Sobic002G001600 Sobic001G543900--Sobic006G009400 Sobic002G166700 Sobic002G166700 Sobic001G543900--Sobic002G166700 Sobic001G543900--Sobic005G130200 Sobic001G543900--Sobic001G272000 Sobic001G543900--Sobic010G248200
Octagon: transcription factors


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