Gene annotation
Transcriptome id Sobic.001G439500.3,Sobic.001G439500.1,Sobic.001G439500.2
Synonym ACBP2, Sb01g041320
Functional annotation acyl CoA binding protein, putative, expressed
UniProt A0A1B6QQV4 , C5WR05 , A0A1Z5SAT5
Pfam PF00887
Panther DB PTHR23310 PTHR23310:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0000062; fatty-acyl-CoA binding


Orthologs (automatic annotation)
TAIR AT4G24230 : acyl-CoA-binding domain 3
RAP-DB (Rice) LOC_Os03g14000.1 : acyl CoA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a001532
Brachypodium KQK22603
Barley HORVU4Hr1G063810.2 , HORVU4Hr1G063810.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
2 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
3 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1
5 Sobic.004G112500 - -
6 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
7 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
8 Sobic.002G001600 MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.002G283300 protein kinase family protein, putative, expressed -
10 Sobic.004G212800 - -
11 Sobic.010G248200 KID-containing protein, putative, expressed -
12 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
13 Sobic.005G162600 zinc knuckle domain containing protein, expressed -
14 Sobic.001G243901 - -
15 Sobic.004G196700 expressed protein -
16 Sobic.003G204000 expressed protein -
17 Sobic.002G253500 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
18 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
19 Sobic.002G115801 - -
20 Sobic.K016900 arginyl-tRNA--protein transferase 1, putative, expressed -


Gene co-expression network
sample Sobic001G439500 Sobic001G439500 Sobic001G024200 Sobic001G024200 Sobic001G439500--Sobic001G024200 Sobic004G143700 Sobic004G143700 Sobic001G439500--Sobic004G143700 Sobic007G211000 Sobic007G211000 Sobic001G439500--Sobic007G211000 Sobic008G116500 Sobic008G116500 Sobic001G439500--Sobic008G116500 Sobic004G112500 Sobic004G112500 Sobic001G439500--Sobic004G112500 Sobic001G451000 Sobic001G451000 Sobic001G439500--Sobic001G451000 Sobic001G543900 Sobic001G543900 Sobic001G439500--Sobic001G543900 Sobic002G001600 Sobic002G001600 Sobic001G439500--Sobic002G001600 Sobic002G283300 Sobic002G283300 Sobic001G439500--Sobic002G283300 Sobic004G212800 Sobic004G212800 Sobic001G024200--Sobic004G212800 Sobic001G024200--Sobic007G211000 Sobic001G024200--Sobic004G112500 Sobic003G204000 Sobic003G204000 Sobic001G024200--Sobic003G204000 Sobic001G272000 Sobic001G272000 Sobic001G024200--Sobic001G272000 Sobic004G164600 Sobic004G164600 Sobic001G024200--Sobic004G164600 SobicK009900 SobicK009900 Sobic001G024200--SobicK009900 Sobic001G024200--Sobic001G439500 Sobic010G248200 Sobic010G248200 Sobic001G024200--Sobic010G248200 Sobic007G073400 Sobic007G073400 Sobic004G143700--Sobic007G073400 Sobic007G023700 Sobic007G023700 Sobic004G143700--Sobic007G023700 Sobic004G143700--Sobic004G212800 Sobic004G143700--Sobic002G283300 Sobic004G143700--Sobic010G248200 Sobic004G143700--Sobic001G024200 Sobic003G093600 Sobic003G093600 Sobic004G143700--Sobic003G093600 Sobic004G143700--Sobic001G439500 Sobic004G143700--Sobic001G543900 Sobic007G211000--Sobic001G024200 Sobic007G211000--Sobic004G112500 Sobic010G124001 Sobic010G124001 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic007G211000--Sobic004G212800 Sobic007G211000--Sobic010G248200 Sobic008G116500--Sobic002G001600 Sobic008G116500--Sobic001G543900 Sobic007G011400 Sobic007G011400 Sobic008G116500--Sobic007G011400 Sobic008G116500--Sobic001G439500 Sobic006G080300 Sobic006G080300 Sobic008G116500--Sobic006G080300 Sobic007G037100 Sobic007G037100 Sobic008G116500--Sobic007G037100 Sobic002G313300 Sobic002G313300 Sobic008G116500--Sobic002G313300 Sobic001G477800 Sobic001G477800 Sobic008G116500--Sobic001G477800 Sobic004G196700 Sobic004G196700 Sobic008G116500--Sobic004G196700 Sobic004G112500--Sobic001G024200 Sobic004G112500--Sobic004G212800 Sobic004G112500--Sobic007G211000 Sobic004G112500--Sobic001G543900 Sobic004G112500--Sobic004G164600 Sobic004G112500--Sobic010G248200 Sobic004G112500--Sobic010G124001 Sobic008G157950 Sobic008G157950 Sobic004G112500--Sobic008G157950 Sobic008G042250 Sobic008G042250 Sobic004G112500--Sobic008G042250 Sobic005G167300 Sobic005G167300 Sobic001G451000--Sobic005G167300 Sobic002G115801 Sobic002G115801 Sobic001G451000--Sobic002G115801 Sobic010G260500 Sobic010G260500 Sobic001G451000--Sobic010G260500 Sobic002G284200 Sobic002G284200 Sobic001G451000--Sobic002G284200 Sobic003G333600 Sobic003G333600 Sobic001G451000--Sobic003G333600 Sobic007G078000 Sobic007G078000 Sobic001G451000--Sobic007G078000 Sobic001G451000--Sobic001G439500 Sobic004G198000 Sobic004G198000 Sobic001G451000--Sobic004G198000 Sobic001G451000--Sobic004G196700 Sobic001G543900--Sobic001G477800 Sobic001G543900--Sobic002G313300 Sobic001G543900--Sobic004G112500 Sobic001G543900--Sobic002G001600 Sobic006G009400 Sobic006G009400 Sobic001G543900--Sobic006G009400 Sobic002G166700 Sobic002G166700 Sobic001G543900--Sobic002G166700 Sobic005G130200 Sobic005G130200 Sobic001G543900--Sobic005G130200 Sobic001G543900--Sobic001G272000 Sobic001G543900--Sobic010G248200 Sobic002G001600--Sobic008G116500 Sobic002G001600--Sobic001G543900 Sobic002G001600--Sobic002G313300 Sobic008G101800 Sobic008G101800 Sobic002G001600--Sobic008G101800 Sobic007G185900 Sobic007G185900 Sobic002G001600--Sobic007G185900 Sobic002G001600--Sobic002G166700 Sobic008G106000 Sobic008G106000 Sobic002G001600--Sobic008G106000 Sobic002G001600--Sobic007G037100 Sobic002G166600 Sobic002G166600 Sobic002G001600--Sobic002G166600 Sobic009G156000 Sobic009G156000 Sobic002G283300--Sobic009G156000 Sobic010G263800 Sobic010G263800 Sobic002G283300--Sobic010G263800 Sobic002G283300--Sobic004G212800 Sobic002G283300--Sobic004G143700 Sobic002G283300--Sobic006G009400 SobicK016900 SobicK016900 Sobic002G283300--SobicK016900 Sobic001G287301 Sobic001G287301 Sobic002G283300--Sobic001G287301 Sobic002G283300--Sobic010G248200 Sobic002G283300--Sobic005G130200
Octagon: transcription factors


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