Gene annotation
Transcriptome id Sobic.002G115801.1
Synonym -
Functional annotation -
UniProt A0A1W0W3D4
Pfam PF07762
Panther DB PTHR33086 PTHR33086:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g14310.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
2 Sobic.005G167300 BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
3 Sobic.001G287301 - -
4 Sobic.K009900 autophagy-related protein 8D, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
5 Sobic.K016900 arginyl-tRNA--protein transferase 1, putative, expressed -
6 Sobic.003G244800 - -
7 Sobic.003G393300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
8 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
10 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
11 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.010G074500 -(PubMedID : 26320239)@phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
13 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
14 Sobic.002G283300 protein kinase family protein, putative, expressed -
15 Sobic.008G049701 - -
16 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
17 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
18 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
19 Sobic.003G026300 BES1/BZR1 homolog protein, putative, expressed -
20 Sobic.001G024200 lipase class 3 family protein, putative, expressed -


Gene co-expression network
sample Sobic002G115801 Sobic002G115801 Sobic001G451000 Sobic001G451000 Sobic002G115801--Sobic001G451000 Sobic005G167300 Sobic005G167300 Sobic002G115801--Sobic005G167300 Sobic001G287301 Sobic001G287301 Sobic002G115801--Sobic001G287301 SobicK009900 SobicK009900 Sobic002G115801--SobicK009900 SobicK016900 SobicK016900 Sobic002G115801--SobicK016900 Sobic003G244800 Sobic003G244800 Sobic002G115801--Sobic003G244800 Sobic003G393300 Sobic003G393300 Sobic002G115801--Sobic003G393300 Sobic007G211000 Sobic007G211000 Sobic002G115801--Sobic007G211000 Sobic003G117000 Sobic003G117000 Sobic002G115801--Sobic003G117000 Sobic001G451000--Sobic005G167300 Sobic001G451000--Sobic002G115801 Sobic010G260500 Sobic010G260500 Sobic001G451000--Sobic010G260500 Sobic002G284200 Sobic002G284200 Sobic001G451000--Sobic002G284200 Sobic003G333600 Sobic003G333600 Sobic001G451000--Sobic003G333600 Sobic007G078000 Sobic007G078000 Sobic001G451000--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic001G451000--Sobic001G439500 Sobic004G198000 Sobic004G198000 Sobic001G451000--Sobic004G198000 Sobic004G196700 Sobic004G196700 Sobic001G451000--Sobic004G196700 Sobic005G167300--Sobic001G451000 Sobic005G167300--Sobic002G115801 Sobic005G167300--Sobic004G198000 Sobic003G026300 Sobic003G026300 Sobic005G167300--Sobic003G026300 Sobic005G167300--Sobic002G284200 Sobic005G167300--SobicK016900 Sobic007G150200 Sobic007G150200 Sobic005G167300--Sobic007G150200 Sobic004G188300 Sobic004G188300 Sobic005G167300--Sobic004G188300 Sobic005G167300--Sobic003G117000 Sobic008G049701 Sobic008G049701 Sobic001G287301--Sobic008G049701 Sobic008G042250 Sobic008G042250 Sobic001G287301--Sobic008G042250 Sobic005G139800 Sobic005G139800 Sobic001G287301--Sobic005G139800 Sobic005G110430 Sobic005G110430 Sobic001G287301--Sobic005G110430 Sobic009G209800 Sobic009G209800 Sobic001G287301--Sobic009G209800 Sobic001G287301--SobicK009900 Sobic008G157950 Sobic008G157950 Sobic001G287301--Sobic008G157950 Sobic001G253100 Sobic001G253100 Sobic001G287301--Sobic001G253100 Sobic001G128800 Sobic001G128800 Sobic001G287301--Sobic001G128800 Sobic004G076732 Sobic004G076732 SobicK009900--Sobic004G076732 SobicK009900--Sobic005G110430 SobicK009900--Sobic001G253100 SobicK009900--Sobic008G042250 SobicK009900--Sobic008G049701 Sobic002G410200 Sobic002G410200 SobicK009900--Sobic002G410200 SobicK009900--Sobic001G287301 Sobic005G117801 Sobic005G117801 SobicK009900--Sobic005G117801 SobicK009900--Sobic009G209800 Sobic002G283300 Sobic002G283300 SobicK016900--Sobic002G283300 Sobic009G156000 Sobic009G156000 SobicK016900--Sobic009G156000 Sobic004G143700 Sobic004G143700 SobicK016900--Sobic004G143700 SobicK016900--Sobic007G211000 SobicK016900--Sobic003G393300 Sobic001G347600 Sobic001G347600 SobicK016900--Sobic001G347600 SobicK016900--Sobic002G115801 SobicK016900--Sobic005G167300 Sobic003G044900 Sobic003G044900 SobicK016900--Sobic003G044900 Sobic003G244800--Sobic002G410200 Sobic003G244800--Sobic004G076732 Sobic003G244800--SobicK009900 Sobic003G244800--Sobic001G253100 Sobic003G244800--Sobic009G209800 Sobic008G009500 Sobic008G009500 Sobic003G244800--Sobic008G009500 Sobic003G244800--Sobic008G042250 Sobic004G212800 Sobic004G212800 Sobic003G244800--Sobic004G212800 Sobic003G244800--Sobic008G049701 Sobic003G393300--SobicK016900 Sobic003G393300--Sobic002G115801 Sobic003G393300--SobicK009900 Sobic003G393300--Sobic004G198000 Sobic003G393300--Sobic005G167300 Sobic009G157500 Sobic009G157500 Sobic003G393300--Sobic009G157500 Sobic003G393300--Sobic001G451000 Sobic003G393300--Sobic001G287301 Sobic001G272000 Sobic001G272000 Sobic003G393300--Sobic001G272000 Sobic001G024200 Sobic001G024200 Sobic007G211000--Sobic001G024200 Sobic004G112500 Sobic004G112500 Sobic007G211000--Sobic004G112500 Sobic010G124001 Sobic010G124001 Sobic007G211000--Sobic010G124001 Sobic007G211000--Sobic003G117000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic007G211000--Sobic004G212800 Sobic010G248200 Sobic010G248200 Sobic007G211000--Sobic010G248200 Sobic003G117000--Sobic007G211000 Sobic003G117000--Sobic002G284200 Sobic003G117000--Sobic007G150200 Sobic003G117000--Sobic005G117901 Sobic010G218500 Sobic010G218500 Sobic003G117000--Sobic010G218500 Sobic003G117000--Sobic001G024200 Sobic003G117000--Sobic001G243901 Sobic003G121400 Sobic003G121400 Sobic003G117000--Sobic003G121400 Sobic003G036950 Sobic003G036950 Sobic003G117000--Sobic003G036950
Octagon: transcription factors


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