Gene annotation
| Transcriptome id | Sobic.003G026300.1 |
|---|---|
| Synonym | Sb03g002480, BEH4 |
| Functional annotation | BES1/BZR1 homolog protein, putative, expressed |
| UniProt | C5XL78 |
| Pfam | PF05687 |
| Panther DB | PTHR31506 PTHR31506:SF5 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G78700 : BES1/BZR1 homolog 4 |
|---|---|
| RAP-DB (Rice) | LOC_Os01g10610.1 : BES1/BZR1 homolog protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a022988 , Zm00025a051082 , Zm00025a048509 , Zm00025a000535 , Zm00025a014997 |
| Brachypodium | KQJ94168 , KQK03220 , KQK18037 , KQK15538 , PNT75814 |
| Barley | HORVU7Hr1G088980.1 , HORVU7Hr1G088980.3 , HORVU7Hr1G088980.5 , HORVU0Hr1G040070.6 , HORVU0Hr1G040070.5 , HORVU0Hr1G040070.4 , HORVU0Hr1G040070.3 , HORVU0Hr1G040070.2 , HORVU0Hr1G040070.1 , HORVU3Hr1G026420.3 , HORVU3Hr1G026420.2 , HORVU3Hr1G026420.1 , HORVU6Hr1G081650.2 , HORVU6Hr1G081650.1 |
| Wheat | TraesCS6B02G368700 , TraesCS3A02G139000 , TraesCS3B02G156600 , TraesCS7A02G354800 , TraesCS6D02G318800 , TraesCS3D02G139300 , TraesCS2A02G187800 , TraesCS2D02G199900 , TraesCS7B02G272900 , TraesCS6A02G338000 , TraesCS2B02G219300 , TraesCS7D02G368000 |
| Populus | - |
JBrowse
| Sobic.003G026300 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G008800 | VHS and GAT domain containing protein, expressed | - |
| 2 | Sobic.004G188300 | regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed | - |
| 3 | Sobic.004G088400 | GTPase-activating protein, putative, expressed | - |
| 4 | Sobic.005G167300 | BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed | - |
| 5 | Sobic.007G063200 | tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed | K08066: NFYC, nuclear transcription factor Y, gamma |
| 6 | Sobic.001G451000 | two-component response regulator, putative, expressed | K14491: two-component response regulator ARR-B family |
| 7 | Sobic.005G139800 | Brix domain containing protein, putative, expressed | - |
| 8 | Sobic.002G115801 | - | - |
| 9 | Sobic.005G162600 | zinc knuckle domain containing protein, expressed | - |
| 10 | Sobic.002G221900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed | K05933: aminocyclopropanecarboxylate oxidase |
| 11 | Sobic.003G346000 | IQ calmodulin-binding motif domain containing protein, expressed | - |
| 12 | Sobic.010G174800 | OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed | K04382: serine/threonine-protein phosphatase 2A catalytic subunit |
| 13 | Sobic.001G271801 | - | - |
| 14 | Sobic.007G130300 | ES43 protein, putative, expressed | - |
| 15 | Sobic.004G198000 | protein kinase domain containing protein, expressed | K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5 |
| 16 | Sobic.K009900 | autophagy-related protein 8D, putative, expressed | K08341: GABARAP, ATG8, GABA(A) receptor-associated protein |
| 17 | Sobic.001G287301 | - | - |
| 18 | Sobic.003G359300 | ELM2 domain containing protein, putative, expressed | - |
| 19 | Sobic.002G410200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 20 | Sobic.008G025900 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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