Gene annotation
Transcriptome id Sobic.004G198000.1
Synonym NEK5, Sb04g024470, ATNEK5
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XWF0
Pfam PF00069
Panther DB PTHR24362 PTHR24362:SF255
NCBI CDD KOG0589; Serine/threonine protein kinase
KEGG Orthology K08857; NIMA (never in mitosis gene a)-related kinase 1/4/5
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G20860 : NIMA-related kinase 5
RAP-DB (Rice) LOC_Os02g37830.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021354
Brachypodium KQK00098
Barley HORVU6Hr1G052500.8 , HORVU6Hr1G052500.9 , HORVU6Hr1G052500.6 , HORVU6Hr1G052500.7 , HORVU6Hr1G052500.4 , HORVU6Hr1G052500.5 , HORVU6Hr1G052500.2 , HORVU6Hr1G052500.3 , HORVU6Hr1G052500.1 , HORVU6Hr1G052500.10 , HORVU6Hr1G052500.11 , HORVU6Hr1G052500.12
Wheat TraesCS6B02G226200 , TraesCS6B02G226200 , TraesCS6A02G200300 , TraesCS6D02G189600 , TraesCS6D02G189600
Populus -


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cDNA sequences
Sobic.004G198000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G167300 BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
2 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
3 Sobic.K016900 arginyl-tRNA--protein transferase 1, putative, expressed -
4 Sobic.003G393300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
5 Sobic.002G115801 - -
6 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
7 Sobic.003G026300 BES1/BZR1 homolog protein, putative, expressed -
8 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
9 Sobic.001G271801 - -
10 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
11 Sobic.005G046100 bZIP transcription factor domain containing protein, expressed -
12 Sobic.004G118700 cbxX, chromosomal, putative, expressed -
13 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
14 Sobic.010G074500 -(PubMedID : 26320239)@phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
15 Sobic.002G430500 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
16 Sobic.007G145200 serine esterase family protein, putative, expressed -
17 Sobic.002G283300 protein kinase family protein, putative, expressed -
18 Sobic.008G025900 expressed protein -
19 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
20 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37


Gene co-expression network
sample Sobic004G198000 Sobic004G198000 Sobic005G167300 Sobic005G167300 Sobic004G198000--Sobic005G167300 Sobic001G451000 Sobic001G451000 Sobic004G198000--Sobic001G451000 SobicK016900 SobicK016900 Sobic004G198000--SobicK016900 Sobic003G393300 Sobic003G393300 Sobic004G198000--Sobic003G393300 Sobic002G115801 Sobic002G115801 Sobic004G198000--Sobic002G115801 Sobic001G028400 Sobic001G028400 Sobic004G198000--Sobic001G028400 Sobic003G026300 Sobic003G026300 Sobic004G198000--Sobic003G026300 Sobic007G191100 Sobic007G191100 Sobic004G198000--Sobic007G191100 Sobic001G271801 Sobic001G271801 Sobic004G198000--Sobic001G271801 Sobic005G167300--Sobic001G451000 Sobic005G167300--Sobic002G115801 Sobic005G167300--Sobic004G198000 Sobic005G167300--Sobic003G026300 Sobic002G284200 Sobic002G284200 Sobic005G167300--Sobic002G284200 Sobic005G167300--SobicK016900 Sobic007G150200 Sobic007G150200 Sobic005G167300--Sobic007G150200 Sobic004G188300 Sobic004G188300 Sobic005G167300--Sobic004G188300 Sobic003G117000 Sobic003G117000 Sobic005G167300--Sobic003G117000 Sobic001G451000--Sobic005G167300 Sobic001G451000--Sobic002G115801 Sobic010G260500 Sobic010G260500 Sobic001G451000--Sobic010G260500 Sobic001G451000--Sobic002G284200 Sobic003G333600 Sobic003G333600 Sobic001G451000--Sobic003G333600 Sobic007G078000 Sobic007G078000 Sobic001G451000--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic001G451000--Sobic001G439500 Sobic001G451000--Sobic004G198000 Sobic004G196700 Sobic004G196700 Sobic001G451000--Sobic004G196700 Sobic002G283300 Sobic002G283300 SobicK016900--Sobic002G283300 Sobic009G156000 Sobic009G156000 SobicK016900--Sobic009G156000 Sobic004G143700 Sobic004G143700 SobicK016900--Sobic004G143700 Sobic007G211000 Sobic007G211000 SobicK016900--Sobic007G211000 SobicK016900--Sobic003G393300 Sobic001G347600 Sobic001G347600 SobicK016900--Sobic001G347600 SobicK016900--Sobic002G115801 SobicK016900--Sobic005G167300 Sobic003G044900 Sobic003G044900 SobicK016900--Sobic003G044900 Sobic003G393300--SobicK016900 Sobic003G393300--Sobic002G115801 SobicK009900 SobicK009900 Sobic003G393300--SobicK009900 Sobic003G393300--Sobic004G198000 Sobic003G393300--Sobic005G167300 Sobic009G157500 Sobic009G157500 Sobic003G393300--Sobic009G157500 Sobic003G393300--Sobic001G451000 Sobic001G287301 Sobic001G287301 Sobic003G393300--Sobic001G287301 Sobic001G272000 Sobic001G272000 Sobic003G393300--Sobic001G272000 Sobic002G115801--Sobic001G451000 Sobic002G115801--Sobic005G167300 Sobic002G115801--Sobic001G287301 Sobic002G115801--SobicK009900 Sobic002G115801--SobicK016900 Sobic003G244800 Sobic003G244800 Sobic002G115801--Sobic003G244800 Sobic002G115801--Sobic003G393300 Sobic002G115801--Sobic007G211000 Sobic002G115801--Sobic003G117000 Sobic010G033400 Sobic010G033400 Sobic001G028400--Sobic010G033400 Sobic007G063200 Sobic007G063200 Sobic001G028400--Sobic007G063200 Sobic001G056200 Sobic001G056200 Sobic001G028400--Sobic001G056200 Sobic004G263900 Sobic004G263900 Sobic001G028400--Sobic004G263900 Sobic003G359300 Sobic003G359300 Sobic001G028400--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic001G028400--Sobic007G205000 Sobic003G437500 Sobic003G437500 Sobic001G028400--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic001G028400--Sobic007G118200 Sobic010G211300 Sobic010G211300 Sobic001G028400--Sobic010G211300 Sobic007G008800 Sobic007G008800 Sobic003G026300--Sobic007G008800 Sobic003G026300--Sobic004G188300 Sobic004G088400 Sobic004G088400 Sobic003G026300--Sobic004G088400 Sobic003G026300--Sobic005G167300 Sobic003G026300--Sobic007G063200 Sobic003G026300--Sobic001G451000 Sobic005G139800 Sobic005G139800 Sobic003G026300--Sobic005G139800 Sobic003G026300--Sobic002G115801 Sobic005G162600 Sobic005G162600 Sobic003G026300--Sobic005G162600 Sobic004G061900 Sobic004G061900 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic008G034600 Sobic008G034600 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic010G263800 Sobic010G263800 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic003G093600 Sobic003G093600 Sobic007G191100--Sobic003G093600 Sobic008G117200 Sobic008G117200 Sobic007G191100--Sobic008G117200 Sobic001G271801--Sobic001G287301 Sobic001G271801--Sobic005G139800 Sobic008G049701 Sobic008G049701 Sobic001G271801--Sobic008G049701 Sobic001G271801--Sobic001G272000 Sobic008G042250 Sobic008G042250 Sobic001G271801--Sobic008G042250 Sobic001G271801--SobicK009900 Sobic001G271801--Sobic007G008800 Sobic001G271900 Sobic001G271900 Sobic001G271801--Sobic001G271900 Sobic001G271801--Sobic002G283300
Octagon: transcription factors


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