Gene annotation
Transcriptome id Sobic.007G191100.1
Synonym Sb07g026030
Functional annotation zinc finger DHHC domain-containing protein, putative, expressed
UniProt C5YHQ5
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF58
NCBI CDD KOG1311; DHHC-type Zn-finger proteins
KEGG Orthology K16675; palmitoyltransferase ZDHHC9/14/18
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G26935 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os08g42370.1 : zinc finger DHHC domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a005294 , Zm00025a030445
Brachypodium KQJ99152 , KQJ90946
Barley HORVU7Hr1G054760.8 , HORVU7Hr1G054760.5 , HORVU7Hr1G054760.4 , HORVU7Hr1G054760.7 , HORVU7Hr1G054760.6 , HORVU7Hr1G054760.1 , HORVU7Hr1G054760.3 , HORVU7Hr1G054760.2
Wheat TraesCS7D02G263200 , TraesCS7D02G263200 , TraesCS3A02G438700 , TraesCS7B02G160100 , TraesCS7A02G261000 , TraesCS7A02G261000 , TraesCS3D02G431100 , TraesCS3B02G472600
Populus PNT29415 , PNT29416 , PNT29417


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cDNA sequences
Sobic.007G191100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
2 Sobic.002G076400 structural constituent of ribosome, putative, expressed -
3 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
4 Sobic.010G077600 gb protein, putative, expressed -
5 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
6 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
7 Sobic.010G074500 -(PubMedID : 26320239)@phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
8 Sobic.003G093600 methyltransferase, putative, expressed -
9 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
10 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
11 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
12 Sobic.007G094801 - -
13 Sobic.002G177400 expressed protein -
14 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
15 Sobic.004G271900 RMD5 homolog A, putative, expressed -
16 Sobic.007G088900 expressed protein -
17 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
18 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
19 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
20 Sobic.003G437500 syntaxin 6, putative, expressed -


Gene co-expression network
sample Sobic007G191100 Sobic007G191100 Sobic004G061900 Sobic004G061900 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic008G034600 Sobic008G034600 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic010G263800 Sobic010G263800 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic003G093600 Sobic003G093600 Sobic007G191100--Sobic003G093600 Sobic008G117200 Sobic008G117200 Sobic007G191100--Sobic008G117200 Sobic004G061900--Sobic007G191100 Sobic008G129700 Sobic008G129700 Sobic004G061900--Sobic008G129700 Sobic006G129700 Sobic006G129700 Sobic004G061900--Sobic006G129700 Sobic004G061900--Sobic008G117200 Sobic009G030300 Sobic009G030300 Sobic004G061900--Sobic009G030300 Sobic004G345700 Sobic004G345700 Sobic004G061900--Sobic004G345700 Sobic002G177400 Sobic002G177400 Sobic004G061900--Sobic002G177400 Sobic001G094000 Sobic001G094000 Sobic004G061900--Sobic001G094000 Sobic004G027100 Sobic004G027100 Sobic004G061900--Sobic004G027100 Sobic002G076400--Sobic007G191100 Sobic003G315332 Sobic003G315332 Sobic002G076400--Sobic003G315332 Sobic002G076400--Sobic007G011400 Sobic007G142050 Sobic007G142050 Sobic002G076400--Sobic007G142050 Sobic002G076400--Sobic008G117200 Sobic002G076400--Sobic010G263800 Sobic002G076400--Sobic002G177400 Sobic008G068800 Sobic008G068800 Sobic002G076400--Sobic008G068800 Sobic002G076400--Sobic004G061900 Sobic007G205800 Sobic007G205800 Sobic008G034600--Sobic007G205800 Sobic008G034600--Sobic007G011400 Sobic008G034600--Sobic010G263800 Sobic004G271900 Sobic004G271900 Sobic008G034600--Sobic004G271900 Sobic008G034600--Sobic008G117200 Sobic002G421700 Sobic002G421700 Sobic008G034600--Sobic002G421700 Sobic009G022200 Sobic009G022200 Sobic008G034600--Sobic009G022200 Sobic007G224900 Sobic007G224900 Sobic008G034600--Sobic007G224900 Sobic003G346000 Sobic003G346000 Sobic008G034600--Sobic003G346000 Sobic010G077600--Sobic007G191100 Sobic003G044900 Sobic003G044900 Sobic010G077600--Sobic003G044900 Sobic010G077600--Sobic003G093600 Sobic009G214600 Sobic009G214600 Sobic010G077600--Sobic009G214600 Sobic003G185200 Sobic003G185200 Sobic010G077600--Sobic003G185200 Sobic007G094801 Sobic007G094801 Sobic010G077600--Sobic007G094801 Sobic009G257300 Sobic009G257300 Sobic010G077600--Sobic009G257300 Sobic004G143700 Sobic004G143700 Sobic010G077600--Sobic004G143700 Sobic004G119000 Sobic004G119000 Sobic010G077600--Sobic004G119000 Sobic006G009400 Sobic006G009400 Sobic010G263800--Sobic006G009400 Sobic010G263800--Sobic007G011400 Sobic002G077200 Sobic002G077200 Sobic010G263800--Sobic002G077200 Sobic002G313300 Sobic002G313300 Sobic010G263800--Sobic002G313300 Sobic002G157300 Sobic002G157300 Sobic010G263800--Sobic002G157300 Sobic010G263800--Sobic007G205800 Sobic009G117400 Sobic009G117400 Sobic010G263800--Sobic009G117400 Sobic001G347600 Sobic001G347600 Sobic010G263800--Sobic001G347600 Sobic010G263800--Sobic008G034600 Sobic007G011400--Sobic001G094000 Sobic007G011400--Sobic007G205800 Sobic007G011400--Sobic002G157300 Sobic007G011400--Sobic010G263800 Sobic007G011400--Sobic002G313300 Sobic009G040700 Sobic009G040700 Sobic007G011400--Sobic009G040700 Sobic002G157000 Sobic002G157000 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic007G011400--Sobic008G034600 Sobic010G074500--Sobic010G263800 Sobic010G074500--Sobic006G009400 Sobic010G074500--Sobic007G094801 Sobic010G074500--Sobic007G011400 Sobic002G283300 Sobic002G283300 Sobic010G074500--Sobic002G283300 Sobic005G141801 Sobic005G141801 Sobic010G074500--Sobic005G141801 Sobic009G156000 Sobic009G156000 Sobic010G074500--Sobic009G156000 Sobic010G074500--Sobic004G143700 Sobic010G074500--Sobic007G205800 Sobic007G023700 Sobic007G023700 Sobic003G093600--Sobic007G023700 Sobic003G093600--Sobic009G022200 Sobic003G093600--Sobic004G271900 Sobic003G093600--Sobic007G205800 Sobic003G093600--Sobic004G143700 Sobic003G093600--Sobic009G156000 Sobic009G087800 Sobic009G087800 Sobic003G093600--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G093600--Sobic003G258400 Sobic001G424700 Sobic001G424700 Sobic003G093600--Sobic001G424700 Sobic008G117200--Sobic010G263800 Sobic008G117200--Sobic008G034600 Sobic008G117200--Sobic001G094000 Sobic004G088400 Sobic004G088400 Sobic008G117200--Sobic004G088400 Sobic008G117200--Sobic002G177400 Sobic008G117200--Sobic002G421700 Sobic007G116400 Sobic007G116400 Sobic008G117200--Sobic007G116400 Sobic008G117200--Sobic007G011400 Sobic001G477800 Sobic001G477800 Sobic008G117200--Sobic001G477800
Octagon: transcription factors


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