Gene annotation
Transcriptome id Sobic.004G061900.1
Synonym SUN2, Sb04g005160, ATSUN2
Functional annotation Sad1 / UNC-like C-terminal domain containing protein, putative, expressed
UniProt C5XW88
Pfam PF07738
Panther DB PTHR12911 PTHR12911:SF27
NCBI CDD KOG2687; Spindle pole body protein, contains UNC-84 domain
KEGG Orthology K19347; SUN domain-containing protein 1/2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10730 : SAD1/UNC-84 domain protein 2
RAP-DB (Rice) LOC_Os05g18770.1 : Sad1 / UNC-like C-terminal domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a019162
Brachypodium KQK07558
Barley HORVU1Hr1G019590.3 , HORVU1Hr1G019590.2 , HORVU1Hr1G019590.1
Wheat TraesCS1D02G090900 , TraesCS1B02G108700
Populus -


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cDNA sequences
Sobic.004G061900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
2 Sobic.008G129700 PAPA-1-like conserved region family protein, expressed K11666: INO80B, ZNHIT4, INO80 complex subunit B
3 Sobic.006G129700 amine oxidase, flavin-containing, domain containing protein, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
4 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
5 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
6 Sobic.004G345700 TBC domain containing protein, expressed -
7 Sobic.002G177400 expressed protein -
8 Sobic.001G094000 expressed protein -
9 Sobic.004G027100 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
10 Sobic.006G028200 glycine-rich protein, putative, expressed -
11 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
12 Sobic.001G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@squalene synthetase, putative, expressed K00801: farnesyl-diphosphate farnesyltransferase
13 Sobic.002G076400 structural constituent of ribosome, putative, expressed -
14 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
15 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
16 Sobic.001G056200 expressed protein -
17 Sobic.008G068800 cytokinin inducible protein, putative, expressed -
18 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
19 Sobic.001G039700 transcription elongation factor protein, putative, expressed K03145: transcription elongation factor S-II
20 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -


Gene co-expression network
sample Sobic004G061900 Sobic004G061900 Sobic007G191100 Sobic007G191100 Sobic004G061900--Sobic007G191100 Sobic008G129700 Sobic008G129700 Sobic004G061900--Sobic008G129700 Sobic006G129700 Sobic006G129700 Sobic004G061900--Sobic006G129700 Sobic008G117200 Sobic008G117200 Sobic004G061900--Sobic008G117200 Sobic009G030300 Sobic009G030300 Sobic004G061900--Sobic009G030300 Sobic004G345700 Sobic004G345700 Sobic004G061900--Sobic004G345700 Sobic002G177400 Sobic002G177400 Sobic004G061900--Sobic002G177400 Sobic001G094000 Sobic001G094000 Sobic004G061900--Sobic001G094000 Sobic004G027100 Sobic004G027100 Sobic004G061900--Sobic004G027100 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic008G034600 Sobic008G034600 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic010G263800 Sobic010G263800 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic003G093600 Sobic003G093600 Sobic007G191100--Sobic003G093600 Sobic007G191100--Sobic008G117200 Sobic003G336800 Sobic003G336800 Sobic008G129700--Sobic003G336800 Sobic008G129700--Sobic004G061900 Sobic002G061400 Sobic002G061400 Sobic008G129700--Sobic002G061400 Sobic008G129700--Sobic008G117200 Sobic008G129700--Sobic002G177400 Sobic007G185900 Sobic007G185900 Sobic008G129700--Sobic007G185900 Sobic008G078100 Sobic008G078100 Sobic008G129700--Sobic008G078100 Sobic003G248500 Sobic003G248500 Sobic008G129700--Sobic003G248500 Sobic004G088400 Sobic004G088400 Sobic008G129700--Sobic004G088400 Sobic006G129700--Sobic004G061900 Sobic003G315332 Sobic003G315332 Sobic006G129700--Sobic003G315332 Sobic007G094801 Sobic007G094801 Sobic006G129700--Sobic007G094801 Sobic006G129700--Sobic008G117200 Sobic005G162600 Sobic005G162600 Sobic006G129700--Sobic005G162600 Sobic006G129700--Sobic002G177400 Sobic006G129700--Sobic007G011400 Sobic006G129700--Sobic008G034600 Sobic006G129700--Sobic009G030300 Sobic008G117200--Sobic010G263800 Sobic008G117200--Sobic008G034600 Sobic008G117200--Sobic001G094000 Sobic008G117200--Sobic004G088400 Sobic008G117200--Sobic002G177400 Sobic002G421700 Sobic002G421700 Sobic008G117200--Sobic002G421700 Sobic007G116400 Sobic007G116400 Sobic008G117200--Sobic007G116400 Sobic008G117200--Sobic007G011400 Sobic001G477800 Sobic001G477800 Sobic008G117200--Sobic001G477800 Sobic009G030300--Sobic002G177400 Sobic001G226000 Sobic001G226000 Sobic009G030300--Sobic001G226000 Sobic009G030300--Sobic004G061900 Sobic009G044900 Sobic009G044900 Sobic009G030300--Sobic009G044900 Sobic004G013600 Sobic004G013600 Sobic009G030300--Sobic004G013600 Sobic009G030300--Sobic004G088400 Sobic009G030300--Sobic008G117200 Sobic002G334600 Sobic002G334600 Sobic009G030300--Sobic002G334600 Sobic009G030300--Sobic008G129700 Sobic002G197100 Sobic002G197100 Sobic004G345700--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic004G345700--Sobic001G514000 Sobic004G007300 Sobic004G007300 Sobic004G345700--Sobic004G007300 Sobic001G408700 Sobic001G408700 Sobic004G345700--Sobic001G408700 Sobic005G154500 Sobic005G154500 Sobic004G345700--Sobic005G154500 Sobic001G176200 Sobic001G176200 Sobic004G345700--Sobic001G176200 Sobic006G092800 Sobic006G092800 Sobic004G345700--Sobic006G092800 Sobic003G205501 Sobic003G205501 Sobic004G345700--Sobic003G205501 Sobic010G245000 Sobic010G245000 Sobic004G345700--Sobic010G245000 Sobic002G177400--Sobic004G088400 Sobic002G177400--Sobic009G030300 Sobic002G177400--Sobic008G117200 Sobic007G008800 Sobic007G008800 Sobic002G177400--Sobic007G008800 Sobic002G177400--Sobic008G129700 Sobic002G177400--Sobic007G116400 Sobic003G346000 Sobic003G346000 Sobic002G177400--Sobic003G346000 Sobic002G177400--Sobic004G061900 Sobic008G068800 Sobic008G068800 Sobic002G177400--Sobic008G068800 Sobic001G094000--Sobic007G011400 Sobic009G040700 Sobic009G040700 Sobic001G094000--Sobic009G040700 Sobic001G094000--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic001G094000--Sobic002G157000 Sobic003G268300 Sobic003G268300 Sobic001G094000--Sobic003G268300 Sobic002G157300 Sobic002G157300 Sobic001G094000--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic001G094000--Sobic003G187400 Sobic004G031700 Sobic004G031700 Sobic001G094000--Sobic004G031700 Sobic006G080300 Sobic006G080300 Sobic001G094000--Sobic006G080300 Sobic004G027100--Sobic004G061900 Sobic004G027100--Sobic004G088400 Sobic010G260500 Sobic010G260500 Sobic004G027100--Sobic010G260500 Sobic001G235000 Sobic001G235000 Sobic004G027100--Sobic001G235000 Sobic004G027100--Sobic002G157300 Sobic004G027100--Sobic002G177400 Sobic004G027100--Sobic007G008800 Sobic004G027100--Sobic009G040700 Sobic004G027100--Sobic008G117200
Octagon: transcription factors


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