Gene annotation
Transcriptome id Sobic.002G177400.1
Synonym Sb02g022610
Functional annotation expressed protein
UniProt C5XAK3
Pfam PF05664
Panther DB PTHR31280:SF4 PTHR31280
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25800 : Protein of unknown function (DUF810)
RAP-DB (Rice) LOC_Os09g17760.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT68019 , PNT68017 , PNT68018 , PNT68016 , PNT68015 , PNT68014 , KQJ98066 , KQJ89914 , KQJ98065 , KQJ98064 , KQJ98067 , PNT64429
Barley HORVU5Hr1G041860.2 , HORVU5Hr1G041860.3 , HORVU5Hr1G041860.1 , HORVU5Hr1G041860.6 , HORVU5Hr1G041860.7 , HORVU5Hr1G041860.4 , HORVU5Hr1G041860.5
Wheat TraesCS5B02G185400 , TraesCS5D02G192300 , TraesCS5A02G187000 , TraesCS5A02G187000 , TraesCS5A02G187000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G088400 GTPase-activating protein, putative, expressed -
2 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
3 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
4 Sobic.007G008800 VHS and GAT domain containing protein, expressed -
5 Sobic.008G129700 PAPA-1-like conserved region family protein, expressed K11666: INO80B, ZNHIT4, INO80 complex subunit B
6 Sobic.007G116400 - -
7 Sobic.003G346000 IQ calmodulin-binding motif domain containing protein, expressed -
8 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
9 Sobic.008G068800 cytokinin inducible protein, putative, expressed -
10 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
11 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
12 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
13 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -
14 Sobic.006G129700 amine oxidase, flavin-containing, domain containing protein, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
15 Sobic.002G076400 structural constituent of ribosome, putative, expressed -
16 Sobic.001G094000 expressed protein -
17 Sobic.009G044900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
18 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
19 Sobic.003G336800 expressed protein -
20 Sobic.002G090400 polygalacturonase, putative, expressed -


Gene co-expression network
sample Sobic002G177400 Sobic002G177400 Sobic004G088400 Sobic004G088400 Sobic002G177400--Sobic004G088400 Sobic009G030300 Sobic009G030300 Sobic002G177400--Sobic009G030300 Sobic008G117200 Sobic008G117200 Sobic002G177400--Sobic008G117200 Sobic007G008800 Sobic007G008800 Sobic002G177400--Sobic007G008800 Sobic008G129700 Sobic008G129700 Sobic002G177400--Sobic008G129700 Sobic007G116400 Sobic007G116400 Sobic002G177400--Sobic007G116400 Sobic003G346000 Sobic003G346000 Sobic002G177400--Sobic003G346000 Sobic004G061900 Sobic004G061900 Sobic002G177400--Sobic004G061900 Sobic008G068800 Sobic008G068800 Sobic002G177400--Sobic008G068800 Sobic004G088400--Sobic002G177400 Sobic004G088400--Sobic007G008800 Sobic003G336800 Sobic003G336800 Sobic004G088400--Sobic003G336800 Sobic004G088400--Sobic008G117200 Sobic003G026300 Sobic003G026300 Sobic004G088400--Sobic003G026300 Sobic004G088400--Sobic003G346000 Sobic004G088400--Sobic008G129700 Sobic004G088400--Sobic007G116400 Sobic004G088400--Sobic009G030300 Sobic009G030300--Sobic002G177400 Sobic001G226000 Sobic001G226000 Sobic009G030300--Sobic001G226000 Sobic009G030300--Sobic004G061900 Sobic009G044900 Sobic009G044900 Sobic009G030300--Sobic009G044900 Sobic004G013600 Sobic004G013600 Sobic009G030300--Sobic004G013600 Sobic009G030300--Sobic004G088400 Sobic009G030300--Sobic008G117200 Sobic002G334600 Sobic002G334600 Sobic009G030300--Sobic002G334600 Sobic009G030300--Sobic008G129700 Sobic010G263800 Sobic010G263800 Sobic008G117200--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic008G117200--Sobic008G034600 Sobic001G094000 Sobic001G094000 Sobic008G117200--Sobic001G094000 Sobic008G117200--Sobic004G088400 Sobic008G117200--Sobic002G177400 Sobic002G421700 Sobic002G421700 Sobic008G117200--Sobic002G421700 Sobic008G117200--Sobic007G116400 Sobic007G011400 Sobic007G011400 Sobic008G117200--Sobic007G011400 Sobic001G477800 Sobic001G477800 Sobic008G117200--Sobic001G477800 Sobic007G008800--Sobic003G026300 Sobic007G008800--Sobic004G088400 SobicK009900 SobicK009900 Sobic007G008800--SobicK009900 Sobic007G008800--Sobic002G177400 Sobic004G076732 Sobic004G076732 Sobic007G008800--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic007G008800--Sobic002G410200 Sobic001G024200 Sobic001G024200 Sobic007G008800--Sobic001G024200 Sobic005G139800 Sobic005G139800 Sobic007G008800--Sobic005G139800 Sobic001G271801 Sobic001G271801 Sobic007G008800--Sobic001G271801 Sobic008G129700--Sobic003G336800 Sobic008G129700--Sobic004G061900 Sobic002G061400 Sobic002G061400 Sobic008G129700--Sobic002G061400 Sobic008G129700--Sobic008G117200 Sobic008G129700--Sobic002G177400 Sobic007G185900 Sobic007G185900 Sobic008G129700--Sobic007G185900 Sobic008G078100 Sobic008G078100 Sobic008G129700--Sobic008G078100 Sobic003G248500 Sobic003G248500 Sobic008G129700--Sobic003G248500 Sobic008G129700--Sobic004G088400 Sobic007G116400--Sobic001G094000 Sobic001G454301 Sobic001G454301 Sobic007G116400--Sobic001G454301 Sobic009G104300 Sobic009G104300 Sobic007G116400--Sobic009G104300 Sobic007G116400--Sobic008G068800 Sobic007G116400--Sobic008G117200 Sobic006G080300 Sobic006G080300 Sobic007G116400--Sobic006G080300 Sobic004G169501 Sobic004G169501 Sobic007G116400--Sobic004G169501 Sobic007G116400--Sobic001G477800 Sobic009G239351 Sobic009G239351 Sobic007G116400--Sobic009G239351 Sobic002G049000 Sobic002G049000 Sobic003G346000--Sobic002G049000 Sobic003G346000--Sobic007G011400 Sobic003G346000--Sobic008G034600 Sobic002G313300 Sobic002G313300 Sobic003G346000--Sobic002G313300 Sobic002G151600 Sobic002G151600 Sobic003G346000--Sobic002G151600 Sobic003G346000--Sobic004G088400 Sobic003G346000--Sobic007G008800 Sobic003G346000--Sobic002G177400 Sobic004G005400 Sobic004G005400 Sobic003G346000--Sobic004G005400 Sobic007G191100 Sobic007G191100 Sobic004G061900--Sobic007G191100 Sobic004G061900--Sobic008G129700 Sobic006G129700 Sobic006G129700 Sobic004G061900--Sobic006G129700 Sobic004G061900--Sobic008G117200 Sobic004G061900--Sobic009G030300 Sobic004G345700 Sobic004G345700 Sobic004G061900--Sobic004G345700 Sobic004G061900--Sobic002G177400 Sobic004G061900--Sobic001G094000 Sobic004G027100 Sobic004G027100 Sobic004G061900--Sobic004G027100 Sobic008G068800--Sobic007G116400 Sobic007G142050 Sobic007G142050 Sobic008G068800--Sobic007G142050 Sobic003G204000 Sobic003G204000 Sobic008G068800--Sobic003G204000 Sobic008G068800--Sobic004G169501 Sobic009G059600 Sobic009G059600 Sobic008G068800--Sobic009G059600 Sobic003G315332 Sobic003G315332 Sobic008G068800--Sobic003G315332 Sobic004G286900 Sobic004G286900 Sobic008G068800--Sobic004G286900 Sobic003G424100 Sobic003G424100 Sobic008G068800--Sobic003G424100 Sobic008G068800--Sobic001G024200
Octagon: transcription factors


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