Gene annotation
Transcriptome id Sobic.006G129700.1
Synonym HEMG2, MEE61, Sb06g020950, PPO2
Functional annotation amine oxidase, flavin-containing, domain containing protein, expressed
UniProt C5YBC2
Pfam PF13450
Panther DB PTHR10742 PTHR10742:SF229
NCBI CDD KOG1276; Protoporphyrinogen oxidase
KEGG Orthology K00231; PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G14220 : Flavin containing amine oxidoreductase family
RAP-DB (Rice) LOC_Os04g41260.1 : amine oxidase, flavin-containing, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010908
Brachypodium KQJ83285
Barley HORVU2Hr1G084670.17 , HORVU2Hr1G084670.16 , HORVU2Hr1G084670.15 , HORVU2Hr1G084670.14 , HORVU2Hr1G084670.13 , HORVU2Hr1G084670.12 , HORVU2Hr1G084670.11 , HORVU2Hr1G084670.10 , HORVU2Hr1G084670.19 , HORVU2Hr1G084670.18 , HORVU2Hr1G084670.9 , HORVU2Hr1G084670.8 , HORVU2Hr1G084670.28 , HORVU2Hr1G084670.26 , HORVU2Hr1G084670.27 , HORVU2Hr1G084670.24 , HORVU2Hr1G084670.25 , HORVU2Hr1G084670.22 , HORVU2Hr1G084670.23 , HORVU2Hr1G084670.20 , HORVU2Hr1G084670.21
Wheat TraesCS2A02G347900 , TraesCS2D02G346200 , TraesCS2B02G366300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
2 Sobic.003G315332 - K15421: secretion-regulating guanine nucleotide exchange factor
3 Sobic.007G094801 - -
4 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
5 Sobic.005G162600 zinc knuckle domain containing protein, expressed -
6 Sobic.002G177400 expressed protein -
7 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
8 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
9 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
10 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
11 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
12 Sobic.007G116400 - -
13 Sobic.001G094000 expressed protein -
14 Sobic.010G074500 -(PubMedID : 26320239)@phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
15 Sobic.008G129700 PAPA-1-like conserved region family protein, expressed K11666: INO80B, ZNHIT4, INO80 complex subunit B
16 Sobic.003G093600 methyltransferase, putative, expressed -
17 Sobic.007G195400 FHA domain containing protein, putative, expressed -
18 Sobic.003G239900 ketol-acid reductoisomerase, chloroplast precursor, putative, expressed K00053: ketol-acid reductoisomerase
19 Sobic.008G068800 cytokinin inducible protein, putative, expressed -
20 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic006G129700 Sobic006G129700 Sobic004G061900 Sobic004G061900 Sobic006G129700--Sobic004G061900 Sobic003G315332 Sobic003G315332 Sobic006G129700--Sobic003G315332 Sobic007G094801 Sobic007G094801 Sobic006G129700--Sobic007G094801 Sobic008G117200 Sobic008G117200 Sobic006G129700--Sobic008G117200 Sobic005G162600 Sobic005G162600 Sobic006G129700--Sobic005G162600 Sobic002G177400 Sobic002G177400 Sobic006G129700--Sobic002G177400 Sobic007G011400 Sobic007G011400 Sobic006G129700--Sobic007G011400 Sobic008G034600 Sobic008G034600 Sobic006G129700--Sobic008G034600 Sobic009G030300 Sobic009G030300 Sobic006G129700--Sobic009G030300 Sobic007G191100 Sobic007G191100 Sobic004G061900--Sobic007G191100 Sobic008G129700 Sobic008G129700 Sobic004G061900--Sobic008G129700 Sobic004G061900--Sobic006G129700 Sobic004G061900--Sobic008G117200 Sobic004G061900--Sobic009G030300 Sobic004G345700 Sobic004G345700 Sobic004G061900--Sobic004G345700 Sobic004G061900--Sobic002G177400 Sobic001G094000 Sobic001G094000 Sobic004G061900--Sobic001G094000 Sobic004G027100 Sobic004G027100 Sobic004G061900--Sobic004G027100 Sobic004G169501 Sobic004G169501 Sobic003G315332--Sobic004G169501 Sobic007G142050 Sobic007G142050 Sobic003G315332--Sobic007G142050 Sobic002G076400 Sobic002G076400 Sobic003G315332--Sobic002G076400 Sobic008G068800 Sobic008G068800 Sobic003G315332--Sobic008G068800 Sobic003G315332--Sobic006G129700 Sobic001G543900 Sobic001G543900 Sobic003G315332--Sobic001G543900 Sobic010G263800 Sobic010G263800 Sobic003G315332--Sobic010G263800 Sobic003G204000 Sobic003G204000 Sobic003G315332--Sobic003G204000 Sobic007G089600 Sobic007G089600 Sobic003G315332--Sobic007G089600 Sobic010G074500 Sobic010G074500 Sobic007G094801--Sobic010G074500 Sobic007G094801--Sobic010G263800 Sobic007G094801--Sobic007G011400 Sobic007G094801--Sobic008G034600 Sobic007G094801--Sobic006G129700 Sobic007G094801--Sobic003G315332 Sobic007G205800 Sobic007G205800 Sobic007G094801--Sobic007G205800 Sobic007G094801--Sobic007G191100 Sobic004G143700 Sobic004G143700 Sobic007G094801--Sobic004G143700 Sobic008G117200--Sobic010G263800 Sobic008G117200--Sobic008G034600 Sobic008G117200--Sobic001G094000 Sobic004G088400 Sobic004G088400 Sobic008G117200--Sobic004G088400 Sobic008G117200--Sobic002G177400 Sobic002G421700 Sobic002G421700 Sobic008G117200--Sobic002G421700 Sobic007G116400 Sobic007G116400 Sobic008G117200--Sobic007G116400 Sobic008G117200--Sobic007G011400 Sobic001G477800 Sobic001G477800 Sobic008G117200--Sobic001G477800 Sobic001G222300 Sobic001G222300 Sobic005G162600--Sobic001G222300 Sobic008G116500 Sobic008G116500 Sobic005G162600--Sobic008G116500 Sobic008G101800 Sobic008G101800 Sobic005G162600--Sobic008G101800 Sobic001G439500 Sobic001G439500 Sobic005G162600--Sobic001G439500 Sobic003G093600 Sobic003G093600 Sobic005G162600--Sobic003G093600 Sobic007G008800 Sobic007G008800 Sobic005G162600--Sobic007G008800 Sobic005G162600--Sobic006G129700 Sobic007G037100 Sobic007G037100 Sobic005G162600--Sobic007G037100 Sobic005G162600--Sobic003G204000 Sobic002G177400--Sobic004G088400 Sobic002G177400--Sobic009G030300 Sobic002G177400--Sobic008G117200 Sobic002G177400--Sobic007G008800 Sobic002G177400--Sobic008G129700 Sobic002G177400--Sobic007G116400 Sobic003G346000 Sobic003G346000 Sobic002G177400--Sobic003G346000 Sobic002G177400--Sobic004G061900 Sobic002G177400--Sobic008G068800 Sobic007G011400--Sobic001G094000 Sobic007G011400--Sobic007G205800 Sobic002G157300 Sobic002G157300 Sobic007G011400--Sobic002G157300 Sobic007G011400--Sobic010G263800 Sobic002G313300 Sobic002G313300 Sobic007G011400--Sobic002G313300 Sobic009G040700 Sobic009G040700 Sobic007G011400--Sobic009G040700 Sobic002G157000 Sobic002G157000 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic007G011400--Sobic008G034600 Sobic008G034600--Sobic007G205800 Sobic008G034600--Sobic007G011400 Sobic008G034600--Sobic010G263800 Sobic004G271900 Sobic004G271900 Sobic008G034600--Sobic004G271900 Sobic008G034600--Sobic008G117200 Sobic008G034600--Sobic002G421700 Sobic009G022200 Sobic009G022200 Sobic008G034600--Sobic009G022200 Sobic007G224900 Sobic007G224900 Sobic008G034600--Sobic007G224900 Sobic008G034600--Sobic003G346000 Sobic009G030300--Sobic002G177400 Sobic001G226000 Sobic001G226000 Sobic009G030300--Sobic001G226000 Sobic009G030300--Sobic004G061900 Sobic009G044900 Sobic009G044900 Sobic009G030300--Sobic009G044900 Sobic004G013600 Sobic004G013600 Sobic009G030300--Sobic004G013600 Sobic009G030300--Sobic004G088400 Sobic009G030300--Sobic008G117200 Sobic002G334600 Sobic002G334600 Sobic009G030300--Sobic002G334600 Sobic009G030300--Sobic008G129700
Octagon: transcription factors


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