Gene annotation
Transcriptome id Sobic.003G239900.1
Synonym Sb03g029720
Functional annotation ketol-acid reductoisomerase, chloroplast precursor, putative, expressed
UniProt C5XF87
Pfam PF07991 PF01450
Panther DB PTHR21371 PTHR21371:SF11
NCBI CDD -
KEGG Orthology K00053; ketol-acid reductoisomerase
Gene Ontology GO:0009082; branched-chain amino acid biosynthetic process GO:0004455ketol-acid reductoisomerase activity GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G58610 : ketol-acid reductoisomerase
RAP-DB (Rice) LOC_Os01g46380.1 : ketol-acid reductoisomerase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027770 , Zm00025a028229 , Zm00025a036667
Brachypodium KQK08988 , KQK04757
Barley HORVU1Hr1G090490.11 , HORVU1Hr1G090490.10 , HORVU1Hr1G090490.13 , HORVU1Hr1G090490.12 , HORVU1Hr1G090490.15 , HORVU1Hr1G090490.14 , HORVU1Hr1G090490.17 , HORVU1Hr1G090490.16 , HORVU1Hr1G090490.9 , HORVU1Hr1G090490.8 , HORVU1Hr1G090490.5 , HORVU1Hr1G090490.4 , HORVU1Hr1G090490.7 , HORVU1Hr1G090490.6 , HORVU1Hr1G090490.1 , HORVU1Hr1G090490.3 , HORVU1Hr1G090490.2
Wheat TraesCS1A02G411900
Populus -


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cDNA sequences
Sobic.003G239900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
2 Sobic.003G267800 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
3 Sobic.009G175900 KH domain-containing protein, putative, expressed K14945: protein quaking
4 Sobic.006G217200 PPR repeat domain containing protein, putative, expressed -
5 Sobic.008G078100 EDM2, putative, expressed -
6 Sobic.001G371000 GTPase of unknown function domain containing protein, putative, expressed K14537: NUG2, nuclear GTP-binding protein
7 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -
8 Sobic.001G039700 transcription elongation factor protein, putative, expressed K03145: transcription elongation factor S-II
9 Sobic.004G031700 expressed protein -
10 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
11 Sobic.004G088400 GTPase-activating protein, putative, expressed -
12 Sobic.006G129700 amine oxidase, flavin-containing, domain containing protein, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
13 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
14 Sobic.003G440700 leucine rich repeat domain containing protein, putative, expressed -
15 Sobic.002G313300 bromodomain domain containing protein, expressed -
16 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
17 Sobic.005G009200 expressed protein -
18 Sobic.001G544200 endonuclease, putative, expressed K10848: ERCC4, DNA excision repair protein ERCC-4
19 Sobic.002G177400 expressed protein -
20 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase


Gene co-expression network
sample Sobic003G239900 Sobic003G239900 Sobic008G117200 Sobic008G117200 Sobic003G239900--Sobic008G117200 Sobic003G267800 Sobic003G267800 Sobic003G239900--Sobic003G267800 Sobic009G175900 Sobic009G175900 Sobic003G239900--Sobic009G175900 Sobic006G217200 Sobic006G217200 Sobic003G239900--Sobic006G217200 Sobic008G078100 Sobic008G078100 Sobic003G239900--Sobic008G078100 Sobic001G371000 Sobic001G371000 Sobic003G239900--Sobic001G371000 Sobic002G421700 Sobic002G421700 Sobic003G239900--Sobic002G421700 Sobic001G039700 Sobic001G039700 Sobic003G239900--Sobic001G039700 Sobic004G031700 Sobic004G031700 Sobic003G239900--Sobic004G031700 Sobic010G263800 Sobic010G263800 Sobic008G117200--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic008G117200--Sobic008G034600 Sobic001G094000 Sobic001G094000 Sobic008G117200--Sobic001G094000 Sobic004G088400 Sobic004G088400 Sobic008G117200--Sobic004G088400 Sobic002G177400 Sobic002G177400 Sobic008G117200--Sobic002G177400 Sobic008G117200--Sobic002G421700 Sobic007G116400 Sobic007G116400 Sobic008G117200--Sobic007G116400 Sobic007G011400 Sobic007G011400 Sobic008G117200--Sobic007G011400 Sobic001G477800 Sobic001G477800 Sobic008G117200--Sobic001G477800 Sobic005G133500 Sobic005G133500 Sobic003G267800--Sobic005G133500 Sobic003G258900 Sobic003G258900 Sobic003G267800--Sobic003G258900 Sobic002G058400 Sobic002G058400 Sobic003G267800--Sobic002G058400 Sobic003G267800--Sobic003G239900 Sobic003G267800--Sobic009G175900 Sobic002G158700 Sobic002G158700 Sobic003G267800--Sobic002G158700 Sobic003G440700 Sobic003G440700 Sobic003G267800--Sobic003G440700 Sobic003G267800--Sobic006G217200 Sobic002G396000 Sobic002G396000 Sobic003G267800--Sobic002G396000 Sobic009G175900--Sobic003G239900 Sobic009G175900--Sobic003G267800 Sobic009G175900--Sobic002G421700 Sobic009G175900--Sobic006G217200 Sobic003G442000 Sobic003G442000 Sobic009G175900--Sobic003G442000 Sobic009G175900--Sobic001G039700 Sobic004G333700 Sobic004G333700 Sobic009G175900--Sobic004G333700 Sobic009G175900--Sobic001G371000 Sobic005G009200 Sobic005G009200 Sobic009G175900--Sobic005G009200 Sobic001G454301 Sobic001G454301 Sobic006G217200--Sobic001G454301 Sobic006G217200--Sobic002G421700 Sobic006G217200--Sobic005G133500 Sobic002G259800 Sobic002G259800 Sobic006G217200--Sobic002G259800 Sobic007G000800 Sobic007G000800 Sobic006G217200--Sobic007G000800 Sobic006G217200--Sobic003G239900 Sobic009G151200 Sobic009G151200 Sobic006G217200--Sobic009G151200 Sobic006G217200--Sobic005G009200 Sobic006G013500 Sobic006G013500 Sobic006G217200--Sobic006G013500 Sobic008G078100--Sobic001G094000 Sobic008G054500 Sobic008G054500 Sobic008G078100--Sobic008G054500 Sobic009G040700 Sobic009G040700 Sobic008G078100--Sobic009G040700 Sobic008G078100--Sobic001G477800 Sobic003G187400 Sobic003G187400 Sobic008G078100--Sobic003G187400 Sobic001G544200 Sobic001G544200 Sobic008G078100--Sobic001G544200 Sobic007G185900 Sobic007G185900 Sobic008G078100--Sobic007G185900 Sobic003G422300 Sobic003G422300 Sobic008G078100--Sobic003G422300 Sobic004G196700 Sobic004G196700 Sobic008G078100--Sobic004G196700 Sobic002G362300 Sobic002G362300 Sobic001G371000--Sobic002G362300 Sobic001G371000--Sobic005G009200 Sobic004G026100 Sobic004G026100 Sobic001G371000--Sobic004G026100 Sobic001G371000--Sobic003G239900 Sobic009G216000 Sobic009G216000 Sobic001G371000--Sobic009G216000 Sobic001G371000--Sobic009G151200 Sobic009G022100 Sobic009G022100 Sobic001G371000--Sobic009G022100 Sobic001G371000--Sobic003G442000 Sobic001G371000--Sobic008G117200 Sobic002G421700--Sobic008G034600 Sobic002G421700--Sobic008G117200 Sobic002G421700--Sobic001G454301 Sobic002G061400 Sobic002G061400 Sobic002G421700--Sobic002G061400 Sobic005G015900 Sobic005G015900 Sobic002G421700--Sobic005G015900 Sobic008G129700 Sobic008G129700 Sobic002G421700--Sobic008G129700 Sobic002G421700--Sobic007G116400 Sobic002G421700--Sobic001G094000 Sobic002G421700--Sobic006G217200 Sobic001G039700--Sobic008G034600 Sobic004G271900 Sobic004G271900 Sobic001G039700--Sobic004G271900 Sobic001G056200 Sobic001G056200 Sobic001G039700--Sobic001G056200 Sobic001G039700--Sobic003G440700 Sobic009G022200 Sobic009G022200 Sobic001G039700--Sobic009G022200 Sobic001G039700--Sobic002G421700 Sobic004G061900 Sobic004G061900 Sobic001G039700--Sobic004G061900 Sobic001G221100 Sobic001G221100 Sobic001G039700--Sobic001G221100 Sobic003G359300 Sobic003G359300 Sobic001G039700--Sobic003G359300 Sobic009G000500 Sobic009G000500 Sobic004G031700--Sobic009G000500 Sobic003G445400 Sobic003G445400 Sobic004G031700--Sobic003G445400 Sobic004G031700--Sobic001G544200 Sobic004G031700--Sobic001G477800 Sobic006G080300 Sobic006G080300 Sobic004G031700--Sobic006G080300 Sobic006G128900 Sobic006G128900 Sobic004G031700--Sobic006G128900 Sobic004G031700--Sobic001G094000 Sobic001G511500 Sobic001G511500 Sobic004G031700--Sobic001G511500 Sobic004G031700--Sobic002G158700
Octagon: transcription factors


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