Gene annotation
Transcriptome id Sobic.008G034600.5,Sobic.008G034600.4,Sobic.008G034600.2,Sobic.008G034600.1,Sobic.008G034600.3
Synonym Sb08g002980
Functional annotation protein kinase PKN/PRK1, effector, putative, expressed
UniProt C5YRP7
Pfam -
Panther DB PTHR33405 PTHR33405:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55170 : -
RAP-DB (Rice) LOC_Os12g09089.1,LOC_Os12g09089.2 : protein kinase PKN/PRK1, effector, putative, expressed
MaizeGDB (Corn) Zm00025a029035
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.008G034600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
2 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
3 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
4 Sobic.004G271900 RMD5 homolog A, putative, expressed -
5 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
6 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -
7 Sobic.009G022200 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
8 Sobic.007G224900 RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
9 Sobic.003G346000 IQ calmodulin-binding motif domain containing protein, expressed -
10 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
11 Sobic.002G051450 - -
12 Sobic.004G211400 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
13 Sobic.001G039700 transcription elongation factor protein, putative, expressed K03145: transcription elongation factor S-II
14 Sobic.009G117400 protein kinase domain containing protein, expressed -
15 Sobic.002G151600 R-interacting factor 1, putative, expressed -
16 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
17 Sobic.002G313300 bromodomain domain containing protein, expressed -
18 Sobic.002G157200 expressed protein -
19 Sobic.002G077200 expressed protein -
20 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic008G034600 Sobic008G034600 Sobic007G205800 Sobic007G205800 Sobic008G034600--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic008G034600--Sobic007G011400 Sobic010G263800 Sobic010G263800 Sobic008G034600--Sobic010G263800 Sobic004G271900 Sobic004G271900 Sobic008G034600--Sobic004G271900 Sobic008G117200 Sobic008G117200 Sobic008G034600--Sobic008G117200 Sobic002G421700 Sobic002G421700 Sobic008G034600--Sobic002G421700 Sobic009G022200 Sobic009G022200 Sobic008G034600--Sobic009G022200 Sobic007G224900 Sobic007G224900 Sobic008G034600--Sobic007G224900 Sobic003G346000 Sobic003G346000 Sobic008G034600--Sobic003G346000 Sobic007G205800--Sobic007G011400 Sobic009G087800 Sobic009G087800 Sobic007G205800--Sobic009G087800 Sobic007G205800--Sobic010G263800 Sobic007G205800--Sobic008G034600 Sobic007G205800--Sobic004G271900 Sobic007G205800--Sobic009G022200 Sobic003G093600 Sobic003G093600 Sobic007G205800--Sobic003G093600 Sobic003G258400 Sobic003G258400 Sobic007G205800--Sobic003G258400 Sobic002G077200 Sobic002G077200 Sobic007G205800--Sobic002G077200 Sobic001G094000 Sobic001G094000 Sobic007G011400--Sobic001G094000 Sobic007G011400--Sobic007G205800 Sobic002G157300 Sobic002G157300 Sobic007G011400--Sobic002G157300 Sobic007G011400--Sobic010G263800 Sobic002G313300 Sobic002G313300 Sobic007G011400--Sobic002G313300 Sobic009G040700 Sobic009G040700 Sobic007G011400--Sobic009G040700 Sobic002G157000 Sobic002G157000 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic007G011400--Sobic008G034600 Sobic006G009400 Sobic006G009400 Sobic010G263800--Sobic006G009400 Sobic010G263800--Sobic007G011400 Sobic010G263800--Sobic002G077200 Sobic010G263800--Sobic002G313300 Sobic010G263800--Sobic002G157300 Sobic010G263800--Sobic007G205800 Sobic009G117400 Sobic009G117400 Sobic010G263800--Sobic009G117400 Sobic001G347600 Sobic001G347600 Sobic010G263800--Sobic001G347600 Sobic010G263800--Sobic008G034600 Sobic004G271900--Sobic009G117400 Sobic004G271900--Sobic007G205800 Sobic004G271900--Sobic008G034600 Sobic004G271900--Sobic010G263800 Sobic004G271900--Sobic003G093600 Sobic004G256600 Sobic004G256600 Sobic004G271900--Sobic004G256600 Sobic004G271900--Sobic007G011400 Sobic004G271900--Sobic003G258400 Sobic009G117300 Sobic009G117300 Sobic004G271900--Sobic009G117300 Sobic008G117200--Sobic010G263800 Sobic008G117200--Sobic008G034600 Sobic008G117200--Sobic001G094000 Sobic004G088400 Sobic004G088400 Sobic008G117200--Sobic004G088400 Sobic002G177400 Sobic002G177400 Sobic008G117200--Sobic002G177400 Sobic008G117200--Sobic002G421700 Sobic007G116400 Sobic007G116400 Sobic008G117200--Sobic007G116400 Sobic008G117200--Sobic007G011400 Sobic001G477800 Sobic001G477800 Sobic008G117200--Sobic001G477800 Sobic002G421700--Sobic008G034600 Sobic002G421700--Sobic008G117200 Sobic001G454301 Sobic001G454301 Sobic002G421700--Sobic001G454301 Sobic002G061400 Sobic002G061400 Sobic002G421700--Sobic002G061400 Sobic005G015900 Sobic005G015900 Sobic002G421700--Sobic005G015900 Sobic008G129700 Sobic008G129700 Sobic002G421700--Sobic008G129700 Sobic002G421700--Sobic007G116400 Sobic002G421700--Sobic001G094000 Sobic006G217200 Sobic006G217200 Sobic002G421700--Sobic006G217200 Sobic009G022200--Sobic007G011400 Sobic009G022200--Sobic007G205800 Sobic009G022200--Sobic003G093600 Sobic009G022200--Sobic008G034600 Sobic004G211400 Sobic004G211400 Sobic009G022200--Sobic004G211400 Sobic009G022200--Sobic009G087800 Sobic009G022200--Sobic004G271900 Sobic008G116500 Sobic008G116500 Sobic009G022200--Sobic008G116500 Sobic009G022200--Sobic003G258400 Sobic007G224900--Sobic008G034600 Sobic002G157200 Sobic002G157200 Sobic007G224900--Sobic002G157200 Sobic001G045700 Sobic001G045700 Sobic007G224900--Sobic001G045700 Sobic001G179000 Sobic001G179000 Sobic007G224900--Sobic001G179000 Sobic007G224900--Sobic004G211400 Sobic009G059600 Sobic009G059600 Sobic007G224900--Sobic009G059600 Sobic007G224900--Sobic008G117200 Sobic002G049000 Sobic002G049000 Sobic007G224900--Sobic002G049000 Sobic007G224900--Sobic009G022200 Sobic003G346000--Sobic002G049000 Sobic003G346000--Sobic007G011400 Sobic003G346000--Sobic008G034600 Sobic003G346000--Sobic002G313300 Sobic002G151600 Sobic002G151600 Sobic003G346000--Sobic002G151600 Sobic003G346000--Sobic004G088400 Sobic007G008800 Sobic007G008800 Sobic003G346000--Sobic007G008800 Sobic003G346000--Sobic002G177400 Sobic004G005400 Sobic004G005400 Sobic003G346000--Sobic004G005400
Octagon: transcription factors


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