Gene annotation
Transcriptome id Sobic.009G117400.1
Synonym Sb09g018500
Functional annotation protein kinase domain containing protein, expressed
UniProt C5YX82
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF50
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G18610 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g71000.1 : protein kinase APK1B, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a037648 , Zm00025a026100
Brachypodium KQK06623 , KQK11417 , KQK11418
Barley HORVU1Hr1G058100.3 , HORVU1Hr1G058100.2 , HORVU1Hr1G058100.1 , HORVU1Hr1G058100.7 , HORVU1Hr1G058100.6 , HORVU1Hr1G058100.5 , HORVU1Hr1G058100.4 , HORVU1Hr1G058100.9 , HORVU1Hr1G058100.8 , HORVU1Hr1G058100.14 , HORVU1Hr1G058100.13 , HORVU1Hr1G058100.12 , HORVU1Hr1G058100.11 , HORVU1Hr1G058100.10 , HORVU1Hr1G058100.15
Wheat TraesCS1B02G247100 , TraesCS3D02G457400 , TraesCS3D02G457400 , TraesCS1A02G236600 , TraesCS1A02G236600 , TraesCS3B02G506600 , TraesCS1D02G235800 , TraesCS1D02G235800 , TraesCS3A02G463400 , TraesCS3A02G463400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -
2 Sobic.004G271900 RMD5 homolog A, putative, expressed -
3 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
4 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
5 Sobic.004G256600 KH domain containing protein, putative, expressed K14945: protein quaking
6 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
7 Sobic.001G347600 paramyosin, putative, expressed -
8 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
9 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
10 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
11 Sobic.005G141801 - -
12 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
13 Sobic.007G071950 - -
14 Sobic.009G225200 expressed protein -
15 Sobic.006G009400 G-patch domain containing protein, expressed -
16 Sobic.005G187200 expressed protein -
17 Sobic.010G074500 -(PubMedID : 26320239)@phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
18 Sobic.003G258400 splicing factor-related, putative, expressed -
19 Sobic.002G324200 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
20 Sobic.002G077200 expressed protein -


Gene co-expression network
sample Sobic009G117400 Sobic009G117400 Sobic009G117300 Sobic009G117300 Sobic009G117400--Sobic009G117300 Sobic004G271900 Sobic004G271900 Sobic009G117400--Sobic004G271900 Sobic010G263800 Sobic010G263800 Sobic009G117400--Sobic010G263800 Sobic007G205800 Sobic007G205800 Sobic009G117400--Sobic007G205800 Sobic004G256600 Sobic004G256600 Sobic009G117400--Sobic004G256600 Sobic008G034600 Sobic008G034600 Sobic009G117400--Sobic008G034600 Sobic001G347600 Sobic001G347600 Sobic009G117400--Sobic001G347600 Sobic004G057400 Sobic004G057400 Sobic009G117400--Sobic004G057400 Sobic006G209500 Sobic006G209500 Sobic009G117400--Sobic006G209500 Sobic009G117300--Sobic009G117400 Sobic009G117300--Sobic004G271900 Sobic009G225200 Sobic009G225200 Sobic009G117300--Sobic009G225200 Sobic009G117300--Sobic010G263800 Sobic009G117300--Sobic004G057400 Sobic009G117300--Sobic008G034600 Sobic009G117300--Sobic006G209500 Sobic009G117300--Sobic004G256600 Sobic009G117300--Sobic007G205800 Sobic004G271900--Sobic009G117400 Sobic004G271900--Sobic007G205800 Sobic004G271900--Sobic008G034600 Sobic004G271900--Sobic010G263800 Sobic003G093600 Sobic003G093600 Sobic004G271900--Sobic003G093600 Sobic004G271900--Sobic004G256600 Sobic007G011400 Sobic007G011400 Sobic004G271900--Sobic007G011400 Sobic003G258400 Sobic003G258400 Sobic004G271900--Sobic003G258400 Sobic004G271900--Sobic009G117300 Sobic006G009400 Sobic006G009400 Sobic010G263800--Sobic006G009400 Sobic010G263800--Sobic007G011400 Sobic002G077200 Sobic002G077200 Sobic010G263800--Sobic002G077200 Sobic002G313300 Sobic002G313300 Sobic010G263800--Sobic002G313300 Sobic002G157300 Sobic002G157300 Sobic010G263800--Sobic002G157300 Sobic010G263800--Sobic007G205800 Sobic010G263800--Sobic009G117400 Sobic010G263800--Sobic001G347600 Sobic010G263800--Sobic008G034600 Sobic007G205800--Sobic007G011400 Sobic009G087800 Sobic009G087800 Sobic007G205800--Sobic009G087800 Sobic007G205800--Sobic010G263800 Sobic007G205800--Sobic008G034600 Sobic007G205800--Sobic004G271900 Sobic009G022200 Sobic009G022200 Sobic007G205800--Sobic009G022200 Sobic007G205800--Sobic003G093600 Sobic007G205800--Sobic003G258400 Sobic007G205800--Sobic002G077200 Sobic004G256600--Sobic003G258400 Sobic004G256600--Sobic004G271900 Sobic004G256600--Sobic010G263800 Sobic009G040700 Sobic009G040700 Sobic004G256600--Sobic009G040700 Sobic005G187200 Sobic005G187200 Sobic004G256600--Sobic005G187200 Sobic004G256600--Sobic006G009400 Sobic009G231300 Sobic009G231300 Sobic004G256600--Sobic009G231300 Sobic004G256600--Sobic009G117400 Sobic004G256600--Sobic002G077200 Sobic008G034600--Sobic007G205800 Sobic008G034600--Sobic007G011400 Sobic008G034600--Sobic010G263800 Sobic008G034600--Sobic004G271900 Sobic008G117200 Sobic008G117200 Sobic008G034600--Sobic008G117200 Sobic002G421700 Sobic002G421700 Sobic008G034600--Sobic002G421700 Sobic008G034600--Sobic009G022200 Sobic007G224900 Sobic007G224900 Sobic008G034600--Sobic007G224900 Sobic003G346000 Sobic003G346000 Sobic008G034600--Sobic003G346000 Sobic001G347600--Sobic010G263800 Sobic007G023700 Sobic007G023700 Sobic001G347600--Sobic007G023700 Sobic004G143700 Sobic004G143700 Sobic001G347600--Sobic004G143700 Sobic001G347600--Sobic002G077200 Sobic001G347600--Sobic009G117400 Sobic007G035600 Sobic007G035600 Sobic001G347600--Sobic007G035600 Sobic007G073400 Sobic007G073400 Sobic001G347600--Sobic007G073400 Sobic001G347600--Sobic007G205800 SobicK016900 SobicK016900 Sobic001G347600--SobicK016900 Sobic001G090400 Sobic001G090400 Sobic004G057400--Sobic001G090400 Sobic004G205600 Sobic004G205600 Sobic004G057400--Sobic004G205600 Sobic004G057400--Sobic002G157300 Sobic009G000500 Sobic009G000500 Sobic004G057400--Sobic009G000500 Sobic008G067600 Sobic008G067600 Sobic004G057400--Sobic008G067600 Sobic006G128900 Sobic006G128900 Sobic004G057400--Sobic006G128900 Sobic004G057400--Sobic007G011400 Sobic004G031700 Sobic004G031700 Sobic004G057400--Sobic004G031700 Sobic004G057400--Sobic007G205800 Sobic001G478300 Sobic001G478300 Sobic006G209500--Sobic001G478300 Sobic006G209500--Sobic004G271900 Sobic006G088100 Sobic006G088100 Sobic006G209500--Sobic006G088100 Sobic006G209500--Sobic003G093600 Sobic002G324200 Sobic002G324200 Sobic006G209500--Sobic002G324200 Sobic006G209500--Sobic009G117400 Sobic004G150400 Sobic004G150400 Sobic006G209500--Sobic004G150400 Sobic002G262600 Sobic002G262600 Sobic006G209500--Sobic002G262600 Sobic006G209500--Sobic007G205800
Octagon: transcription factors


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