Gene annotation
Transcriptome id Sobic.009G225200.1
Synonym Sb09g027860
Functional annotation expressed protein
UniProt C5YVD1
Pfam PF13324
Panther DB PTHR15492 PTHR15492:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71150 : -
RAP-DB (Rice) LOC_Os05g48070.1 : expressed protein
MaizeGDB (Corn) Zm00025a044491
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -
2 Sobic.009G117400 protein kinase domain containing protein, expressed -
3 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
4 Sobic.001G043900 ORC2 - Putative origin recognition complex subunit 2, expressed K02604: origin recognition complex subunit 2
5 Sobic.003G258900 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
6 Sobic.004G271900 RMD5 homolog A, putative, expressed -
7 Sobic.004G348100 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
8 Sobic.003G442000 IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
9 Sobic.009G015800 expressed protein -
10 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
11 Sobic.003G440700 leucine rich repeat domain containing protein, putative, expressed -
12 Sobic.003G084700 - -
13 Sobic.004G077000 expressed protein -
14 Sobic.001G428400 - K12826: SF3A2, splicing factor 3A subunit 2
15 Sobic.002G270300 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
16 Sobic.007G031800 expressed protein -
17 Sobic.004G211400 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
18 Sobic.001G315100 TKL_IRAK_CrRLK1L-1.16 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
19 Sobic.003G142700 expressed protein -
20 Sobic.007G071950 - -


Gene co-expression network
sample Sobic009G225200 Sobic009G225200 Sobic009G117300 Sobic009G117300 Sobic009G225200--Sobic009G117300 Sobic009G117400 Sobic009G117400 Sobic009G225200--Sobic009G117400 Sobic005G015100 Sobic005G015100 Sobic009G225200--Sobic005G015100 Sobic001G043900 Sobic001G043900 Sobic009G225200--Sobic001G043900 Sobic003G258900 Sobic003G258900 Sobic009G225200--Sobic003G258900 Sobic004G271900 Sobic004G271900 Sobic009G225200--Sobic004G271900 Sobic004G348100 Sobic004G348100 Sobic009G225200--Sobic004G348100 Sobic003G442000 Sobic003G442000 Sobic009G225200--Sobic003G442000 Sobic009G015800 Sobic009G015800 Sobic009G225200--Sobic009G015800 Sobic009G117300--Sobic009G117400 Sobic009G117300--Sobic004G271900 Sobic009G117300--Sobic009G225200 Sobic010G263800 Sobic010G263800 Sobic009G117300--Sobic010G263800 Sobic004G057400 Sobic004G057400 Sobic009G117300--Sobic004G057400 Sobic008G034600 Sobic008G034600 Sobic009G117300--Sobic008G034600 Sobic006G209500 Sobic006G209500 Sobic009G117300--Sobic006G209500 Sobic004G256600 Sobic004G256600 Sobic009G117300--Sobic004G256600 Sobic007G205800 Sobic007G205800 Sobic009G117300--Sobic007G205800 Sobic009G117400--Sobic009G117300 Sobic009G117400--Sobic004G271900 Sobic009G117400--Sobic010G263800 Sobic009G117400--Sobic007G205800 Sobic009G117400--Sobic004G256600 Sobic009G117400--Sobic008G034600 Sobic001G347600 Sobic001G347600 Sobic009G117400--Sobic001G347600 Sobic009G117400--Sobic004G057400 Sobic009G117400--Sobic006G209500 Sobic002G051450 Sobic002G051450 Sobic005G015100--Sobic002G051450 Sobic005G015100--Sobic008G034600 Sobic002G158700 Sobic002G158700 Sobic005G015100--Sobic002G158700 Sobic001G464200 Sobic001G464200 Sobic005G015100--Sobic001G464200 Sobic006G128900 Sobic006G128900 Sobic005G015100--Sobic006G128900 Sobic006G145000 Sobic006G145000 Sobic005G015100--Sobic006G145000 Sobic002G421700 Sobic002G421700 Sobic005G015100--Sobic002G421700 Sobic005G015100--Sobic004G271900 Sobic005G015100--Sobic004G256600 Sobic007G115900 Sobic007G115900 Sobic001G043900--Sobic007G115900 Sobic001G043900--Sobic009G225200 Sobic006G258900 Sobic006G258900 Sobic001G043900--Sobic006G258900 Sobic005G014950 Sobic005G014950 Sobic001G043900--Sobic005G014950 Sobic003G417900 Sobic003G417900 Sobic001G043900--Sobic003G417900 Sobic001G428400 Sobic001G428400 Sobic001G043900--Sobic001G428400 Sobic001G043900--Sobic009G117300 Sobic001G043900--Sobic009G015800 Sobic002G197100 Sobic002G197100 Sobic001G043900--Sobic002G197100 Sobic002G396000 Sobic002G396000 Sobic003G258900--Sobic002G396000 Sobic003G258900--Sobic002G158700 Sobic003G267800 Sobic003G267800 Sobic003G258900--Sobic003G267800 Sobic006G102100 Sobic006G102100 Sobic003G258900--Sobic006G102100 Sobic001G081000 Sobic001G081000 Sobic003G258900--Sobic001G081000 Sobic006G226300 Sobic006G226300 Sobic003G258900--Sobic006G226300 Sobic003G258900--Sobic003G442000 Sobic003G258900--Sobic009G225200 Sobic009G046700 Sobic009G046700 Sobic003G258900--Sobic009G046700 Sobic004G271900--Sobic009G117400 Sobic004G271900--Sobic007G205800 Sobic004G271900--Sobic008G034600 Sobic004G271900--Sobic010G263800 Sobic003G093600 Sobic003G093600 Sobic004G271900--Sobic003G093600 Sobic004G271900--Sobic004G256600 Sobic007G011400 Sobic007G011400 Sobic004G271900--Sobic007G011400 Sobic003G258400 Sobic003G258400 Sobic004G271900--Sobic003G258400 Sobic004G271900--Sobic009G117300 Sobic004G006300 Sobic004G006300 Sobic004G348100--Sobic004G006300 Sobic004G348100--Sobic009G225200 Sobic004G348100--Sobic009G117300 Sobic009G133400 Sobic009G133400 Sobic004G348100--Sobic009G133400 Sobic003G084700 Sobic003G084700 Sobic004G348100--Sobic003G084700 Sobic006G252300 Sobic006G252300 Sobic004G348100--Sobic006G252300 Sobic006G254700 Sobic006G254700 Sobic004G348100--Sobic006G254700 Sobic002G395801 Sobic002G395801 Sobic004G348100--Sobic002G395801 Sobic004G348100--Sobic001G428400 Sobic005G009200 Sobic005G009200 Sobic003G442000--Sobic005G009200 Sobic005G015900 Sobic005G015900 Sobic003G442000--Sobic005G015900 Sobic004G018300 Sobic004G018300 Sobic003G442000--Sobic004G018300 Sobic003G442000--Sobic003G258900 Sobic010G202600 Sobic010G202600 Sobic003G442000--Sobic010G202600 Sobic009G074700 Sobic009G074700 Sobic003G442000--Sobic009G074700 Sobic003G442000--Sobic002G197100 Sobic003G442000--Sobic002G158700 Sobic001G090400 Sobic001G090400 Sobic003G442000--Sobic001G090400 Sobic009G015800--Sobic005G015100 Sobic009G015800--Sobic009G225200 Sobic002G259800 Sobic002G259800 Sobic009G015800--Sobic002G259800 Sobic009G015800--Sobic002G158700 Sobic009G015800--Sobic002G421700 Sobic001G087100 Sobic001G087100 Sobic009G015800--Sobic001G087100 Sobic004G232000 Sobic004G232000 Sobic009G015800--Sobic004G232000 Sobic009G015800--Sobic005G015900 Sobic001G315100 Sobic001G315100 Sobic009G015800--Sobic001G315100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.