Gene annotation
Transcriptome id Sobic.007G031800.1,Sobic.007G031800.2
Synonym
Functional annotation expressed protein
UniProt A0A1B6PFB9 , A0A1B6PFL6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g49920.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -
2 Sobic.009G117400 protein kinase domain containing protein, expressed -
3 Sobic.007G071950 - -
4 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
5 Sobic.009G225200 expressed protein -
6 Sobic.005G173366 - -
7 Sobic.003G258900 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
8 Sobic.007G129401 - -
9 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
10 Sobic.010G021000 expressed protein -
11 Sobic.010G068200 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
12 Sobic.003G416100 flowering promoting factor-like 1, putative, expressed -
13 Sobic.004G196500 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
15 Sobic.004G204200 EMB2423, putative, expressed K11137: TELO2, telomere length regulation protein
16 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
17 Sobic.001G186500 expressed protein -
18 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
19 Sobic.007G072000 disease resistance protein RGA3, putative, expressed -
20 Sobic.001G017600 protein of unknown function containing protein, expressed -


Gene co-expression network
sample Sobic007G031800 Sobic007G031800 Sobic009G117300 Sobic009G117300 Sobic007G031800--Sobic009G117300 Sobic009G117400 Sobic009G117400 Sobic007G031800--Sobic009G117400 Sobic007G071950 Sobic007G071950 Sobic007G031800--Sobic007G071950 Sobic001G498200 Sobic001G498200 Sobic007G031800--Sobic001G498200 Sobic009G225200 Sobic009G225200 Sobic007G031800--Sobic009G225200 Sobic005G173366 Sobic005G173366 Sobic007G031800--Sobic005G173366 Sobic003G258900 Sobic003G258900 Sobic007G031800--Sobic003G258900 Sobic007G129401 Sobic007G129401 Sobic007G031800--Sobic007G129401 Sobic001G464200 Sobic001G464200 Sobic007G031800--Sobic001G464200 Sobic009G117300--Sobic009G117400 Sobic004G271900 Sobic004G271900 Sobic009G117300--Sobic004G271900 Sobic009G117300--Sobic009G225200 Sobic010G263800 Sobic010G263800 Sobic009G117300--Sobic010G263800 Sobic004G057400 Sobic004G057400 Sobic009G117300--Sobic004G057400 Sobic008G034600 Sobic008G034600 Sobic009G117300--Sobic008G034600 Sobic006G209500 Sobic006G209500 Sobic009G117300--Sobic006G209500 Sobic004G256600 Sobic004G256600 Sobic009G117300--Sobic004G256600 Sobic007G205800 Sobic007G205800 Sobic009G117300--Sobic007G205800 Sobic009G117400--Sobic009G117300 Sobic009G117400--Sobic004G271900 Sobic009G117400--Sobic010G263800 Sobic009G117400--Sobic007G205800 Sobic009G117400--Sobic004G256600 Sobic009G117400--Sobic008G034600 Sobic001G347600 Sobic001G347600 Sobic009G117400--Sobic001G347600 Sobic009G117400--Sobic004G057400 Sobic009G117400--Sobic006G209500 Sobic007G072000 Sobic007G072000 Sobic007G071950--Sobic007G072000 Sobic007G071950--Sobic009G117400 Sobic008G055432 Sobic008G055432 Sobic007G071950--Sobic008G055432 Sobic009G040700 Sobic009G040700 Sobic007G071950--Sobic009G040700 Sobic007G071950--Sobic001G464200 Sobic006G009400 Sobic006G009400 Sobic007G071950--Sobic006G009400 Sobic007G071950--Sobic010G263800 Sobic005G141801 Sobic005G141801 Sobic007G071950--Sobic005G141801 Sobic007G071950--Sobic004G256600 Sobic001G498200--Sobic004G256600 Sobic001G028900 Sobic001G028900 Sobic001G498200--Sobic001G028900 Sobic010G248600 Sobic010G248600 Sobic001G498200--Sobic010G248600 Sobic010G270300 Sobic010G270300 Sobic001G498200--Sobic010G270300 Sobic003G113200 Sobic003G113200 Sobic001G498200--Sobic003G113200 Sobic005G015100 Sobic005G015100 Sobic001G498200--Sobic005G015100 Sobic006G128900 Sobic006G128900 Sobic001G498200--Sobic006G128900 Sobic001G498200--Sobic009G117300 Sobic001G498200--Sobic007G031800 Sobic009G225200--Sobic009G117300 Sobic009G225200--Sobic009G117400 Sobic009G225200--Sobic005G015100 Sobic001G043900 Sobic001G043900 Sobic009G225200--Sobic001G043900 Sobic009G225200--Sobic003G258900 Sobic009G225200--Sobic004G271900 Sobic004G348100 Sobic004G348100 Sobic009G225200--Sobic004G348100 Sobic003G442000 Sobic003G442000 Sobic009G225200--Sobic003G442000 Sobic009G015800 Sobic009G015800 Sobic009G225200--Sobic009G015800 Sobic005G173366--Sobic007G129401 Sobic009G026400 Sobic009G026400 Sobic005G173366--Sobic009G026400 Sobic002G060500 Sobic002G060500 Sobic005G173366--Sobic002G060500 Sobic005G043400 Sobic005G043400 Sobic005G173366--Sobic005G043400 Sobic004G196500 Sobic004G196500 Sobic005G173366--Sobic004G196500 Sobic009G101600 Sobic009G101600 Sobic005G173366--Sobic009G101600 Sobic003G416100 Sobic003G416100 Sobic005G173366--Sobic003G416100 SobicK010000 SobicK010000 Sobic005G173366--SobicK010000 Sobic007G059300 Sobic007G059300 Sobic005G173366--Sobic007G059300 Sobic002G396000 Sobic002G396000 Sobic003G258900--Sobic002G396000 Sobic002G158700 Sobic002G158700 Sobic003G258900--Sobic002G158700 Sobic003G267800 Sobic003G267800 Sobic003G258900--Sobic003G267800 Sobic006G102100 Sobic006G102100 Sobic003G258900--Sobic006G102100 Sobic001G081000 Sobic001G081000 Sobic003G258900--Sobic001G081000 Sobic006G226300 Sobic006G226300 Sobic003G258900--Sobic006G226300 Sobic003G258900--Sobic003G442000 Sobic003G258900--Sobic009G225200 Sobic009G046700 Sobic009G046700 Sobic003G258900--Sobic009G046700 Sobic007G129401--Sobic009G026400 Sobic007G129401--Sobic002G060500 Sobic007G129401--Sobic005G173366 Sobic007G129401--Sobic004G196500 Sobic008G013900 Sobic008G013900 Sobic007G129401--Sobic008G013900 Sobic007G129401--Sobic005G043400 Sobic001G164200 Sobic001G164200 Sobic007G129401--Sobic001G164200 Sobic010G068200 Sobic010G068200 Sobic007G129401--Sobic010G068200 Sobic007G129401--Sobic009G101600 Sobic001G464200--Sobic002G158700 Sobic001G544200 Sobic001G544200 Sobic001G464200--Sobic001G544200 Sobic004G031700 Sobic004G031700 Sobic001G464200--Sobic004G031700 Sobic001G477800 Sobic001G477800 Sobic001G464200--Sobic001G477800 Sobic001G464200--Sobic006G128900 Sobic002G144966 Sobic002G144966 Sobic001G464200--Sobic002G144966 Sobic001G511500 Sobic001G511500 Sobic001G464200--Sobic001G511500 Sobic001G464200--Sobic010G263800 Sobic003G445400 Sobic003G445400 Sobic001G464200--Sobic003G445400
Octagon: transcription factors


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