Gene annotation
Transcriptome id Sobic.010G021000.2,Sobic.010G021000.1
Synonym Sb10g002000
Functional annotation expressed protein
UniProt A0A1W0VR41 , A0A1W0VR43
Pfam PF04578 PF13968
Panther DB PTHR31325 PTHR31325:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19090 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os05g43252.2,LOC_Os05g43252.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G256932 - -
2 Sobic.010G256800 - -
3 Sobic.002G301500 amidase, putative, expressed K01426: E3.5.1.4, amidase
4 Sobic.009G178300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
5 Sobic.008G133400 unc-93 homolog A, putative, expressed -
6 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
7 Sobic.007G031800 expressed protein -
8 Sobic.001G017600 protein of unknown function containing protein, expressed -
9 Sobic.003G142700 expressed protein -
10 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
11 Sobic.010G106900 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed -
12 Sobic.001G081000 nucleotide-binding protein-like, putative, expressed K03593: mrp, ATP-binding protein involved in chromosome partitioning
13 Sobic.003G258900 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
14 Sobic.001G235900 white-brown complex homolog protein, putative, expressed -
15 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
16 Sobic.010G147833 - -
17 Sobic.004G018300 expressed protein K06970: 23S rRNA (adenine1618-N6)-methyltransferase
18 Sobic.009G112400 OsFBX361 - F-box domain containing protein, expressed -
19 Sobic.002G260900 protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
20 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic010G021000 Sobic010G021000 Sobic010G256932 Sobic010G256932 Sobic010G021000--Sobic010G256932 Sobic010G256800 Sobic010G256800 Sobic010G021000--Sobic010G256800 Sobic002G301500 Sobic002G301500 Sobic010G021000--Sobic002G301500 Sobic009G178300 Sobic009G178300 Sobic010G021000--Sobic009G178300 Sobic008G133400 Sobic008G133400 Sobic010G021000--Sobic008G133400 Sobic010G084000 Sobic010G084000 Sobic010G021000--Sobic010G084000 Sobic007G031800 Sobic007G031800 Sobic010G021000--Sobic007G031800 Sobic001G017600 Sobic001G017600 Sobic010G021000--Sobic001G017600 Sobic003G142700 Sobic003G142700 Sobic010G021000--Sobic003G142700 Sobic010G256932--Sobic010G021000 Sobic010G256932--Sobic010G256800 Sobic010G256932--Sobic002G301500 Sobic010G256932--Sobic001G017600 Sobic010G256932--Sobic008G133400 Sobic010G256932--Sobic007G031800 Sobic005G182200 Sobic005G182200 Sobic010G256932--Sobic005G182200 Sobic010G256932--Sobic009G178300 Sobic002G188500 Sobic002G188500 Sobic010G256932--Sobic002G188500 Sobic010G256800--Sobic002G301500 Sobic010G256800--Sobic010G021000 Sobic010G256800--Sobic008G133400 Sobic010G256800--Sobic010G084000 Sobic010G256800--Sobic001G017600 Sobic010G256800--Sobic010G256932 Sobic003G370200 Sobic003G370200 Sobic010G256800--Sobic003G370200 Sobic008G083000 Sobic008G083000 Sobic010G256800--Sobic008G083000 Sobic010G256800--Sobic009G178300 Sobic002G301500--Sobic010G256800 Sobic002G301500--Sobic010G021000 Sobic002G301500--Sobic010G256932 Sobic001G389800 Sobic001G389800 Sobic002G301500--Sobic001G389800 Sobic010G106900 Sobic010G106900 Sobic002G301500--Sobic010G106900 Sobic002G301500--Sobic010G084000 Sobic001G366800 Sobic001G366800 Sobic002G301500--Sobic001G366800 Sobic010G249300 Sobic010G249300 Sobic002G301500--Sobic010G249300 Sobic007G203500 Sobic007G203500 Sobic002G301500--Sobic007G203500 Sobic007G002300 Sobic007G002300 Sobic009G178300--Sobic007G002300 Sobic006G153900 Sobic006G153900 Sobic009G178300--Sobic006G153900 Sobic009G178300--Sobic010G021000 Sobic001G384900 Sobic001G384900 Sobic009G178300--Sobic001G384900 Sobic001G275900 Sobic001G275900 Sobic009G178300--Sobic001G275900 Sobic004G030100 Sobic004G030100 Sobic009G178300--Sobic004G030100 Sobic002G164800 Sobic002G164800 Sobic009G178300--Sobic002G164800 Sobic004G018300 Sobic004G018300 Sobic009G178300--Sobic004G018300 Sobic003G141500 Sobic003G141500 Sobic009G178300--Sobic003G141500 Sobic008G133400--Sobic001G017600 Sobic008G133400--Sobic010G256800 Sobic009G257800 Sobic009G257800 Sobic008G133400--Sobic009G257800 Sobic009G062900 Sobic009G062900 Sobic008G133400--Sobic009G062900 Sobic009G040700 Sobic009G040700 Sobic008G133400--Sobic009G040700 Sobic008G133400--Sobic008G083000 Sobic005G084100 Sobic005G084100 Sobic008G133400--Sobic005G084100 Sobic004G057400 Sobic004G057400 Sobic008G133400--Sobic004G057400 Sobic004G325400 Sobic004G325400 Sobic008G133400--Sobic004G325400 Sobic001G120300 Sobic001G120300 Sobic010G084000--Sobic001G120300 Sobic010G084000--Sobic010G256800 Sobic010G084000--Sobic003G370200 Sobic010G084000--Sobic010G021000 Sobic010G019800 Sobic010G019800 Sobic010G084000--Sobic010G019800 Sobic010G084000--Sobic002G301500 Sobic010G084000--Sobic008G133400 Sobic010G084000--Sobic010G106900 Sobic001G057200 Sobic001G057200 Sobic010G084000--Sobic001G057200 Sobic009G117300 Sobic009G117300 Sobic007G031800--Sobic009G117300 Sobic009G117400 Sobic009G117400 Sobic007G031800--Sobic009G117400 Sobic007G071950 Sobic007G071950 Sobic007G031800--Sobic007G071950 Sobic001G498200 Sobic001G498200 Sobic007G031800--Sobic001G498200 Sobic009G225200 Sobic009G225200 Sobic007G031800--Sobic009G225200 Sobic005G173366 Sobic005G173366 Sobic007G031800--Sobic005G173366 Sobic003G258900 Sobic003G258900 Sobic007G031800--Sobic003G258900 Sobic007G129401 Sobic007G129401 Sobic007G031800--Sobic007G129401 Sobic001G464200 Sobic001G464200 Sobic007G031800--Sobic001G464200 Sobic001G017600--Sobic008G133400 Sobic001G017600--Sobic008G083000 Sobic007G061700 Sobic007G061700 Sobic001G017600--Sobic007G061700 Sobic001G017600--Sobic005G182200 Sobic001G017600--Sobic009G257800 Sobic003G442000 Sobic003G442000 Sobic001G017600--Sobic003G442000 Sobic001G017600--Sobic010G256800 Sobic001G017600--Sobic001G498200 Sobic002G158700 Sobic002G158700 Sobic001G017600--Sobic002G158700 Sobic003G051200 Sobic003G051200 Sobic003G142700--Sobic003G051200 Sobic003G248500 Sobic003G248500 Sobic003G142700--Sobic003G248500 Sobic004G283000 Sobic004G283000 Sobic003G142700--Sobic004G283000 Sobic003G142700--Sobic009G225200 Sobic003G142700--Sobic003G258900 Sobic003G045400 Sobic003G045400 Sobic003G142700--Sobic003G045400 Sobic002G313500 Sobic002G313500 Sobic003G142700--Sobic002G313500 Sobic007G007900 Sobic007G007900 Sobic003G142700--Sobic007G007900 Sobic003G142700--Sobic003G442000
Octagon: transcription factors


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