Gene annotation
Transcriptome id Sobic.010G256932.1
Synonym -
Functional annotation -
UniProt A0A1W0VUW1
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF173
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT5G52450 : MATE efflux family protein
RAP-DB (Rice) LOC_Os06g49310.1 : MATE efflux family protein, putative, expressed
MaizeGDB (Corn) Zm00025a041761
Brachypodium KQK17472
Barley HORVU7Hr1G095900.21 , HORVU7Hr1G095900.20 , HORVU7Hr1G095900.22 , HORVU7Hr1G095900.4 , HORVU7Hr1G095900.1 , HORVU7Hr1G095900.18 , HORVU7Hr1G095900.19 , HORVU7Hr1G095900.14 , HORVU7Hr1G095900.15 , HORVU7Hr1G095900.16 , HORVU7Hr1G095900.17 , HORVU7Hr1G095900.10 , HORVU7Hr1G095900.11 , HORVU7Hr1G095900.12 , HORVU7Hr1G095900.13 , HORVU7Hr1G095900.6 , HORVU7Hr1G095900.7 , HORVU7Hr1G095900.5 , HORVU7Hr1G095900.2 , HORVU7Hr1G095900.3 , HORVU7Hr1G095900.8 , HORVU7Hr1G095900.9
Wheat TraesCS7B02G311000 , TraesCS7A02G411800 , TraesCS7D02G405000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G021000 expressed protein -
2 Sobic.010G256800 - -
3 Sobic.002G301500 amidase, putative, expressed K01426: E3.5.1.4, amidase
4 Sobic.001G017600 protein of unknown function containing protein, expressed -
5 Sobic.008G133400 unc-93 homolog A, putative, expressed -
6 Sobic.007G031800 expressed protein -
7 Sobic.005G182200 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
8 Sobic.009G178300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
9 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
10 Sobic.009G005100 - -
11 Sobic.010G106900 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed -
12 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
13 Sobic.006G145000 disease resistance RPP13-like protein 1, putative, expressed -
14 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
15 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
16 Sobic.002G076000 transporter-related, putative, expressed -
17 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
18 Sobic.001G186401 - -
19 Sobic.005G005000 cysteine-rich receptor-like protein kinase 4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
20 Sobic.004G225000 -(PubMedID : 27964718)@nitrilase, putative, expressed K01501: nitrilase


Gene co-expression network
sample Sobic010G256932 Sobic010G256932 Sobic010G021000 Sobic010G021000 Sobic010G256932--Sobic010G021000 Sobic010G256800 Sobic010G256800 Sobic010G256932--Sobic010G256800 Sobic002G301500 Sobic002G301500 Sobic010G256932--Sobic002G301500 Sobic001G017600 Sobic001G017600 Sobic010G256932--Sobic001G017600 Sobic008G133400 Sobic008G133400 Sobic010G256932--Sobic008G133400 Sobic007G031800 Sobic007G031800 Sobic010G256932--Sobic007G031800 Sobic005G182200 Sobic005G182200 Sobic010G256932--Sobic005G182200 Sobic009G178300 Sobic009G178300 Sobic010G256932--Sobic009G178300 Sobic002G188500 Sobic002G188500 Sobic010G256932--Sobic002G188500 Sobic010G021000--Sobic010G256932 Sobic010G021000--Sobic010G256800 Sobic010G021000--Sobic002G301500 Sobic010G021000--Sobic009G178300 Sobic010G021000--Sobic008G133400 Sobic010G084000 Sobic010G084000 Sobic010G021000--Sobic010G084000 Sobic010G021000--Sobic007G031800 Sobic010G021000--Sobic001G017600 Sobic003G142700 Sobic003G142700 Sobic010G021000--Sobic003G142700 Sobic010G256800--Sobic002G301500 Sobic010G256800--Sobic010G021000 Sobic010G256800--Sobic008G133400 Sobic010G256800--Sobic010G084000 Sobic010G256800--Sobic001G017600 Sobic010G256800--Sobic010G256932 Sobic003G370200 Sobic003G370200 Sobic010G256800--Sobic003G370200 Sobic008G083000 Sobic008G083000 Sobic010G256800--Sobic008G083000 Sobic010G256800--Sobic009G178300 Sobic002G301500--Sobic010G256800 Sobic002G301500--Sobic010G021000 Sobic002G301500--Sobic010G256932 Sobic001G389800 Sobic001G389800 Sobic002G301500--Sobic001G389800 Sobic010G106900 Sobic010G106900 Sobic002G301500--Sobic010G106900 Sobic002G301500--Sobic010G084000 Sobic001G366800 Sobic001G366800 Sobic002G301500--Sobic001G366800 Sobic010G249300 Sobic010G249300 Sobic002G301500--Sobic010G249300 Sobic007G203500 Sobic007G203500 Sobic002G301500--Sobic007G203500 Sobic001G017600--Sobic008G133400 Sobic001G017600--Sobic008G083000 Sobic007G061700 Sobic007G061700 Sobic001G017600--Sobic007G061700 Sobic001G017600--Sobic005G182200 Sobic009G257800 Sobic009G257800 Sobic001G017600--Sobic009G257800 Sobic003G442000 Sobic003G442000 Sobic001G017600--Sobic003G442000 Sobic001G017600--Sobic010G256800 Sobic001G498200 Sobic001G498200 Sobic001G017600--Sobic001G498200 Sobic002G158700 Sobic002G158700 Sobic001G017600--Sobic002G158700 Sobic008G133400--Sobic001G017600 Sobic008G133400--Sobic010G256800 Sobic008G133400--Sobic009G257800 Sobic009G062900 Sobic009G062900 Sobic008G133400--Sobic009G062900 Sobic009G040700 Sobic009G040700 Sobic008G133400--Sobic009G040700 Sobic008G133400--Sobic008G083000 Sobic005G084100 Sobic005G084100 Sobic008G133400--Sobic005G084100 Sobic004G057400 Sobic004G057400 Sobic008G133400--Sobic004G057400 Sobic004G325400 Sobic004G325400 Sobic008G133400--Sobic004G325400 Sobic009G117300 Sobic009G117300 Sobic007G031800--Sobic009G117300 Sobic009G117400 Sobic009G117400 Sobic007G031800--Sobic009G117400 Sobic007G071950 Sobic007G071950 Sobic007G031800--Sobic007G071950 Sobic007G031800--Sobic001G498200 Sobic009G225200 Sobic009G225200 Sobic007G031800--Sobic009G225200 Sobic005G173366 Sobic005G173366 Sobic007G031800--Sobic005G173366 Sobic003G258900 Sobic003G258900 Sobic007G031800--Sobic003G258900 Sobic007G129401 Sobic007G129401 Sobic007G031800--Sobic007G129401 Sobic001G464200 Sobic001G464200 Sobic007G031800--Sobic001G464200 Sobic005G182200--Sobic001G017600 Sobic005G182200--Sobic001G498200 Sobic005G182200--Sobic007G031800 Sobic004G285800 Sobic004G285800 Sobic005G182200--Sobic004G285800 Sobic005G182200--Sobic009G225200 Sobic005G182200--Sobic010G256932 Sobic005G182200--Sobic009G117300 Sobic005G182200--Sobic002G188500 Sobic010G057400 Sobic010G057400 Sobic005G182200--Sobic010G057400 Sobic007G002300 Sobic007G002300 Sobic009G178300--Sobic007G002300 Sobic006G153900 Sobic006G153900 Sobic009G178300--Sobic006G153900 Sobic009G178300--Sobic010G021000 Sobic001G384900 Sobic001G384900 Sobic009G178300--Sobic001G384900 Sobic001G275900 Sobic001G275900 Sobic009G178300--Sobic001G275900 Sobic004G030100 Sobic004G030100 Sobic009G178300--Sobic004G030100 Sobic002G164800 Sobic002G164800 Sobic009G178300--Sobic002G164800 Sobic004G018300 Sobic004G018300 Sobic009G178300--Sobic004G018300 Sobic003G141500 Sobic003G141500 Sobic009G178300--Sobic003G141500 Sobic009G235900 Sobic009G235900 Sobic002G188500--Sobic009G235900 Sobic003G005800 Sobic003G005800 Sobic002G188500--Sobic003G005800 Sobic004G037900 Sobic004G037900 Sobic002G188500--Sobic004G037900 Sobic002G188500--Sobic001G498200 Sobic001G194900 Sobic001G194900 Sobic002G188500--Sobic001G194900 Sobic006G138400 Sobic006G138400 Sobic002G188500--Sobic006G138400 Sobic003G145900 Sobic003G145900 Sobic002G188500--Sobic003G145900 Sobic008G160700 Sobic008G160700 Sobic002G188500--Sobic008G160700 Sobic001G490000 Sobic001G490000 Sobic002G188500--Sobic001G490000
Octagon: transcription factors


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