Gene annotation
Transcriptome id Sobic.002G188500.1
Synonym ATTPS9, Sb02g023610, TPS9
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
trehalose-6-phosphate synthase, putative, expressed
UniProt C5XBE8
Pfam PF02358 PF00982
Panther DB PTHR10788 PTHR10788:SF34
NCBI CDD -
KEGG Orthology K16055; trehalose 6-phosphate synthase/phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G23870 : trehalose-phosphatase/synthase 9
RAP-DB (Rice) LOC_Os09g20990.1 : trehalose-6-phosphate synthase, putative, expressed
MaizeGDB (Corn) Zm00025a006089 , Zm00025a013837 , Zm00025a031019
Brachypodium KQJ98269
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G188500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
2 Sobic.003G005800 salt stress root protein RS1, putative, expressed -
3 Sobic.004G037900 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
4 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
5 Sobic.001G194900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00311: electron-transferring-flavoprotein dehydrogenase
6 Sobic.006G138400 regulatory subunit, putative, expressed -
7 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
8 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
9 Sobic.001G490000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CSLA4 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
10 Sobic.001G028900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
11 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
12 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.001G017600 protein of unknown function containing protein, expressed -
14 Sobic.010G256800 - -
15 Sobic.001G443900 peptide transporter PTR2, putative, expressed -
16 Sobic.008G024600 expressed protein -
17 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
18 Sobic.010G001600 homogentisate 1,2-dioxygenase, putative, expressed K00451: HGD, homogentisate 1,2-dioxygenase
19 Sobic.001G151500 choline transporter-related, putative, expressed -
20 Sobic.001G028700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G188500 Sobic002G188500 Sobic009G235900 Sobic009G235900 Sobic002G188500--Sobic009G235900 Sobic003G005800 Sobic003G005800 Sobic002G188500--Sobic003G005800 Sobic004G037900 Sobic004G037900 Sobic002G188500--Sobic004G037900 Sobic001G498200 Sobic001G498200 Sobic002G188500--Sobic001G498200 Sobic001G194900 Sobic001G194900 Sobic002G188500--Sobic001G194900 Sobic006G138400 Sobic006G138400 Sobic002G188500--Sobic006G138400 Sobic003G145900 Sobic003G145900 Sobic002G188500--Sobic003G145900 Sobic008G160700 Sobic008G160700 Sobic002G188500--Sobic008G160700 Sobic001G490000 Sobic001G490000 Sobic002G188500--Sobic001G490000 Sobic009G235900--Sobic001G194900 Sobic009G235900--Sobic002G188500 Sobic009G235900--Sobic008G160700 Sobic001G359400 Sobic001G359400 Sobic009G235900--Sobic001G359400 Sobic005G007800 Sobic005G007800 Sobic009G235900--Sobic005G007800 Sobic010G042900 Sobic010G042900 Sobic009G235900--Sobic010G042900 Sobic009G235900--Sobic003G005800 Sobic009G235900--Sobic003G145900 Sobic001G347600 Sobic001G347600 Sobic009G235900--Sobic001G347600 Sobic003G005800--Sobic002G188500 Sobic001G443900 Sobic001G443900 Sobic003G005800--Sobic001G443900 Sobic003G005800--Sobic009G235900 Sobic003G005800--Sobic008G160700 Sobic003G005800--Sobic004G037900 Sobic003G005800--Sobic006G138400 Sobic003G005800--Sobic001G194900 Sobic009G121100 Sobic009G121100 Sobic003G005800--Sobic009G121100 Sobic006G214500 Sobic006G214500 Sobic003G005800--Sobic006G214500 Sobic001G151500 Sobic001G151500 Sobic004G037900--Sobic001G151500 Sobic004G037900--Sobic002G188500 Sobic004G037900--Sobic008G160700 Sobic004G037900--Sobic001G490000 Sobic010G001600 Sobic010G001600 Sobic004G037900--Sobic010G001600 Sobic004G037900--Sobic003G005800 Sobic009G119200 Sobic009G119200 Sobic004G037900--Sobic009G119200 Sobic004G037900--Sobic003G145900 Sobic004G037900--Sobic009G235900 Sobic004G256600 Sobic004G256600 Sobic001G498200--Sobic004G256600 Sobic001G028900 Sobic001G028900 Sobic001G498200--Sobic001G028900 Sobic010G248600 Sobic010G248600 Sobic001G498200--Sobic010G248600 Sobic010G270300 Sobic010G270300 Sobic001G498200--Sobic010G270300 Sobic003G113200 Sobic003G113200 Sobic001G498200--Sobic003G113200 Sobic005G015100 Sobic005G015100 Sobic001G498200--Sobic005G015100 Sobic006G128900 Sobic006G128900 Sobic001G498200--Sobic006G128900 Sobic009G117300 Sobic009G117300 Sobic001G498200--Sobic009G117300 Sobic007G031800 Sobic007G031800 Sobic001G498200--Sobic007G031800 Sobic001G194900--Sobic008G160700 Sobic001G194900--Sobic010G001600 Sobic007G130600 Sobic007G130600 Sobic001G194900--Sobic007G130600 Sobic005G187200 Sobic005G187200 Sobic001G194900--Sobic005G187200 Sobic001G543800 Sobic001G543800 Sobic001G194900--Sobic001G543800 Sobic001G194900--Sobic009G235900 Sobic001G424700 Sobic001G424700 Sobic001G194900--Sobic001G424700 Sobic005G177800 Sobic005G177800 Sobic001G194900--Sobic005G177800 Sobic005G130200 Sobic005G130200 Sobic001G194900--Sobic005G130200 Sobic006G138400--Sobic006G214500 Sobic003G408500 Sobic003G408500 Sobic006G138400--Sobic003G408500 Sobic006G138400--Sobic009G121100 Sobic002G046800 Sobic002G046800 Sobic006G138400--Sobic002G046800 Sobic003G407300 Sobic003G407300 Sobic006G138400--Sobic003G407300 Sobic010G001500 Sobic010G001500 Sobic006G138400--Sobic010G001500 Sobic008G009900 Sobic008G009900 Sobic006G138400--Sobic008G009900 Sobic007G024700 Sobic007G024700 Sobic006G138400--Sobic007G024700 Sobic006G138400--Sobic003G005800 Sobic003G145900--Sobic009G235900 Sobic003G145900--Sobic008G160700 Sobic003G145900--Sobic005G007800 Sobic004G330900 Sobic004G330900 Sobic003G145900--Sobic004G330900 Sobic001G221100 Sobic001G221100 Sobic003G145900--Sobic001G221100 Sobic003G145900--Sobic010G042900 Sobic002G303000 Sobic002G303000 Sobic003G145900--Sobic002G303000 Sobic006G114500 Sobic006G114500 Sobic003G145900--Sobic006G114500 Sobic003G145900--Sobic004G037900 Sobic008G160700--Sobic010G001600 Sobic008G160700--Sobic001G194900 Sobic010G078100 Sobic010G078100 Sobic008G160700--Sobic010G078100 Sobic008G160700--Sobic007G130600 Sobic008G160700--Sobic009G235900 Sobic008G160700--Sobic006G214500 Sobic006G124900 Sobic006G124900 Sobic008G160700--Sobic006G124900 Sobic008G160700--Sobic002G303000 Sobic009G027000 Sobic009G027000 Sobic008G160700--Sobic009G027000 Sobic001G490000--Sobic004G037900 Sobic001G490000--Sobic010G001600 Sobic001G490000--Sobic003G005800 Sobic001G490000--Sobic008G160700 Sobic001G373100 Sobic001G373100 Sobic001G490000--Sobic001G373100 Sobic001G490000--Sobic001G151500 Sobic001G490000--Sobic003G145900 Sobic006G114000 Sobic006G114000 Sobic001G490000--Sobic006G114000 Sobic001G490000--Sobic009G235900
Octagon: transcription factors


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