Gene annotation
Transcriptome id Sobic.001G028900.2
Synonym ULP1A
Functional annotation ulp1 protease family, C-terminal catalytic domain containing protein, expressed
UniProt A0A1B6QH25
Pfam PF02902
Panther DB PTHR12606 PTHR12606:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT3G06910 : UB-like protease 1A
RAP-DB (Rice) LOC_Os10g24954.1 : ulp1 protease family, C-terminal catalytic domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT70747 , PNT75909 , KQK15694 , KQK14897 , PNT66950 , KQK15384
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G019600 rp3 protein, putative, expressed -
2 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
3 Sobic.008G024600 expressed protein -
4 Sobic.005G013000 OsFBX181 - F-box domain containing protein, expressed -
5 Sobic.003G005800 salt stress root protein RS1, putative, expressed -
6 Sobic.001G194900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00311: electron-transferring-flavoprotein dehydrogenase
7 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
8 Sobic.010G276800 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
9 Sobic.010G248600 - -
10 Sobic.001G490000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CSLA4 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
11 Sobic.001G186500 expressed protein -
12 Sobic.006G114000 transmembrane anterior posterior transformation 1, putative, expressed -
13 Sobic.004G256600 KH domain containing protein, putative, expressed K14945: protein quaking
14 Sobic.005G032800 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
15 Sobic.010G001600 homogentisate 1,2-dioxygenase, putative, expressed K00451: HGD, homogentisate 1,2-dioxygenase
16 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
17 Sobic.006G159900 DTA2, putative, expressed -
18 Sobic.003G113200 5-nucleotidase domain-containing protein, putative, expressed -
19 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
20 Sobic.001G544200 endonuclease, putative, expressed K10848: ERCC4, DNA excision repair protein ERCC-4


Gene co-expression network
sample Sobic001G028900 Sobic001G028900 Sobic005G019600 Sobic005G019600 Sobic001G028900--Sobic005G019600 Sobic001G498200 Sobic001G498200 Sobic001G028900--Sobic001G498200 Sobic008G024600 Sobic008G024600 Sobic001G028900--Sobic008G024600 Sobic005G013000 Sobic005G013000 Sobic001G028900--Sobic005G013000 Sobic003G005800 Sobic003G005800 Sobic001G028900--Sobic003G005800 Sobic001G194900 Sobic001G194900 Sobic001G028900--Sobic001G194900 Sobic001G464200 Sobic001G464200 Sobic001G028900--Sobic001G464200 Sobic010G276800 Sobic010G276800 Sobic001G028900--Sobic010G276800 Sobic010G248600 Sobic010G248600 Sobic001G028900--Sobic010G248600 Sobic009G221000 Sobic009G221000 Sobic005G019600--Sobic009G221000 Sobic002G161900 Sobic002G161900 Sobic005G019600--Sobic002G161900 Sobic002G173000 Sobic002G173000 Sobic005G019600--Sobic002G173000 Sobic005G032800 Sobic005G032800 Sobic005G019600--Sobic005G032800 Sobic006G128900 Sobic006G128900 Sobic005G019600--Sobic006G128900 Sobic001G474600 Sobic001G474600 Sobic005G019600--Sobic001G474600 Sobic003G113200 Sobic003G113200 Sobic005G019600--Sobic003G113200 Sobic005G019600--Sobic001G028900 Sobic005G019600--Sobic008G024600 Sobic004G256600 Sobic004G256600 Sobic001G498200--Sobic004G256600 Sobic001G498200--Sobic001G028900 Sobic001G498200--Sobic010G248600 Sobic010G270300 Sobic010G270300 Sobic001G498200--Sobic010G270300 Sobic001G498200--Sobic003G113200 Sobic005G015100 Sobic005G015100 Sobic001G498200--Sobic005G015100 Sobic001G498200--Sobic006G128900 Sobic009G117300 Sobic009G117300 Sobic001G498200--Sobic009G117300 Sobic007G031800 Sobic007G031800 Sobic001G498200--Sobic007G031800 Sobic006G209850 Sobic006G209850 Sobic008G024600--Sobic006G209850 Sobic002G053000 Sobic002G053000 Sobic008G024600--Sobic002G053000 Sobic008G024600--Sobic006G128900 Sobic009G040700 Sobic009G040700 Sobic008G024600--Sobic009G040700 Sobic010G129200 Sobic010G129200 Sobic008G024600--Sobic010G129200 Sobic002G158700 Sobic002G158700 Sobic008G024600--Sobic002G158700 Sobic002G343800 Sobic002G343800 Sobic008G024600--Sobic002G343800 Sobic003G280800 Sobic003G280800 Sobic008G024600--Sobic003G280800 Sobic005G045300 Sobic005G045300 Sobic008G024600--Sobic005G045300 Sobic005G013000--Sobic002G158700 Sobic005G013000--Sobic006G128900 Sobic005G013000--Sobic008G024600 Sobic005G013000--Sobic009G040700 Sobic001G544200 Sobic001G544200 Sobic005G013000--Sobic001G544200 Sobic005G013000--Sobic001G464200 Sobic001G111900 Sobic001G111900 Sobic005G013000--Sobic001G111900 Sobic008G078100 Sobic008G078100 Sobic005G013000--Sobic008G078100 Sobic003G445400 Sobic003G445400 Sobic005G013000--Sobic003G445400 Sobic002G188500 Sobic002G188500 Sobic003G005800--Sobic002G188500 Sobic001G443900 Sobic001G443900 Sobic003G005800--Sobic001G443900 Sobic009G235900 Sobic009G235900 Sobic003G005800--Sobic009G235900 Sobic008G160700 Sobic008G160700 Sobic003G005800--Sobic008G160700 Sobic004G037900 Sobic004G037900 Sobic003G005800--Sobic004G037900 Sobic006G138400 Sobic006G138400 Sobic003G005800--Sobic006G138400 Sobic003G005800--Sobic001G194900 Sobic009G121100 Sobic009G121100 Sobic003G005800--Sobic009G121100 Sobic006G214500 Sobic006G214500 Sobic003G005800--Sobic006G214500 Sobic001G194900--Sobic008G160700 Sobic010G001600 Sobic010G001600 Sobic001G194900--Sobic010G001600 Sobic007G130600 Sobic007G130600 Sobic001G194900--Sobic007G130600 Sobic005G187200 Sobic005G187200 Sobic001G194900--Sobic005G187200 Sobic001G543800 Sobic001G543800 Sobic001G194900--Sobic001G543800 Sobic001G194900--Sobic009G235900 Sobic001G424700 Sobic001G424700 Sobic001G194900--Sobic001G424700 Sobic005G177800 Sobic005G177800 Sobic001G194900--Sobic005G177800 Sobic005G130200 Sobic005G130200 Sobic001G194900--Sobic005G130200 Sobic001G464200--Sobic002G158700 Sobic001G464200--Sobic001G544200 Sobic004G031700 Sobic004G031700 Sobic001G464200--Sobic004G031700 Sobic001G477800 Sobic001G477800 Sobic001G464200--Sobic001G477800 Sobic001G464200--Sobic006G128900 Sobic002G144966 Sobic002G144966 Sobic001G464200--Sobic002G144966 Sobic001G511500 Sobic001G511500 Sobic001G464200--Sobic001G511500 Sobic010G263800 Sobic010G263800 Sobic001G464200--Sobic010G263800 Sobic001G464200--Sobic003G445400 Sobic006G124900 Sobic006G124900 Sobic010G276800--Sobic006G124900 Sobic010G276800--Sobic008G024600 Sobic010G276800--Sobic010G001600 Sobic008G042600 Sobic008G042600 Sobic010G276800--Sobic008G042600 Sobic010G276800--Sobic001G543800 Sobic010G276800--Sobic009G040700 Sobic003G008500 Sobic003G008500 Sobic010G276800--Sobic003G008500 Sobic010G276800--Sobic004G256600 Sobic010G276800--Sobic005G177800 Sobic010G248600--Sobic001G498200 Sobic010G248600--Sobic010G270300 Sobic009G085400 Sobic009G085400 Sobic010G248600--Sobic009G085400 Sobic003G416100 Sobic003G416100 Sobic010G248600--Sobic003G416100 Sobic010G248600--Sobic005G019600 Sobic007G129401 Sobic007G129401 Sobic010G248600--Sobic007G129401 Sobic010G248600--Sobic001G028900 Sobic004G070200 Sobic004G070200 Sobic010G248600--Sobic004G070200 Sobic004G142700 Sobic004G142700 Sobic010G248600--Sobic004G142700
Octagon: transcription factors


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