Gene annotation
Transcriptome id Sobic.003G113200.1
Synonym Sb03g009530
Functional annotation 5-nucleotidase domain-containing protein, putative, expressed
UniProt A0A1B6Q2M0
Pfam PF05761
Panther DB PTHR12103 PTHR12103:SF15
NCBI CDD KOG2469; IMP-GMP specific 5'-nucleotidase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48960 : HAD-superfamily hydrolase, subfamily IG, 5\'-nucleotidase
RAP-DB (Rice) LOC_Os01g14810.1 : 5-nucleotidase domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a035361
Brachypodium PNT70259 , PNT70261 , PNT70260 , PNT70262 , KQK03602 , KQK03603 , PNT70258 , PNT70257
Barley HORVU3Hr1G034210.7 , HORVU3Hr1G034210.6 , HORVU3Hr1G034210.5 , HORVU3Hr1G034210.4 , HORVU3Hr1G034210.3 , HORVU3Hr1G034210.2 , HORVU3Hr1G034210.1
Wheat TraesCS3D02G176600 , TraesCS3D02G176600 , TraesCS3D02G176600 , TraesCS3D02G176600 , TraesCS3B02G200700 , TraesCS3A02G165000 , TraesCS3A02G165000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
2 Sobic.001G111900 - -
3 Sobic.006G021250 - -
4 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
5 Sobic.005G039500 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
6 Sobic.007G178700 - -
7 Sobic.006G209850 - -
8 Sobic.008G024600 expressed protein -
9 Sobic.005G032800 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
10 Sobic.004G256600 KH domain containing protein, putative, expressed K14945: protein quaking
11 Sobic.001G186500 expressed protein -
12 Sobic.005G159000 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed -
13 Sobic.006G009400 G-patch domain containing protein, expressed -
14 Sobic.001G287201 - -
15 Sobic.005G077466 - -
16 Sobic.002G173000 disease resistance protein RGA2, putative, expressed -
17 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
18 Sobic.005G141801 - -
19 Sobic.001G543800 ethylene-responsive element-binding protein, putative, expressed -
20 Sobic.002G243900 - -


Gene co-expression network
sample Sobic003G113200 Sobic003G113200 Sobic006G128900 Sobic006G128900 Sobic003G113200--Sobic006G128900 Sobic001G111900 Sobic001G111900 Sobic003G113200--Sobic001G111900 Sobic006G021250 Sobic006G021250 Sobic003G113200--Sobic006G021250 Sobic003G280800 Sobic003G280800 Sobic003G113200--Sobic003G280800 Sobic005G039500 Sobic005G039500 Sobic003G113200--Sobic005G039500 Sobic007G178700 Sobic007G178700 Sobic003G113200--Sobic007G178700 Sobic006G209850 Sobic006G209850 Sobic003G113200--Sobic006G209850 Sobic008G024600 Sobic008G024600 Sobic003G113200--Sobic008G024600 Sobic005G032800 Sobic005G032800 Sobic003G113200--Sobic005G032800 Sobic006G128900--Sobic006G209850 Sobic001G511500 Sobic001G511500 Sobic006G128900--Sobic001G511500 Sobic004G031700 Sobic004G031700 Sobic006G128900--Sobic004G031700 Sobic009G000500 Sobic009G000500 Sobic006G128900--Sobic009G000500 Sobic001G090400 Sobic001G090400 Sobic006G128900--Sobic001G090400 Sobic003G445400 Sobic003G445400 Sobic006G128900--Sobic003G445400 Sobic003G268300 Sobic003G268300 Sobic006G128900--Sobic003G268300 Sobic001G477800 Sobic001G477800 Sobic006G128900--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic006G128900--Sobic002G157000 Sobic010G056000 Sobic010G056000 Sobic001G111900--Sobic010G056000 Sobic009G161600 Sobic009G161600 Sobic001G111900--Sobic009G161600 Sobic009G127900 Sobic009G127900 Sobic001G111900--Sobic009G127900 Sobic001G454401 Sobic001G454401 Sobic001G111900--Sobic001G454401 Sobic001G111900--Sobic007G178700 Sobic005G077466 Sobic005G077466 Sobic001G111900--Sobic005G077466 Sobic006G262200 Sobic006G262200 Sobic001G111900--Sobic006G262200 Sobic003G084900 Sobic003G084900 Sobic001G111900--Sobic003G084900 Sobic006G009400 Sobic006G009400 Sobic001G111900--Sobic006G009400 Sobic006G021250--Sobic006G209850 Sobic006G021250--Sobic003G280800 Sobic006G021250--Sobic008G024600 Sobic002G173000 Sobic002G173000 Sobic006G021250--Sobic002G173000 Sobic006G021250--Sobic003G113200 Sobic005G079025 Sobic005G079025 Sobic006G021250--Sobic005G079025 Sobic006G021250--Sobic005G032800 Sobic006G021250--Sobic006G128900 Sobic006G021250--Sobic005G077466 Sobic002G309600 Sobic002G309600 Sobic003G280800--Sobic002G309600 Sobic001G071400 Sobic001G071400 Sobic003G280800--Sobic001G071400 Sobic002G134200 Sobic002G134200 Sobic003G280800--Sobic002G134200 Sobic003G280800--Sobic006G209850 Sobic003G119000 Sobic003G119000 Sobic003G280800--Sobic003G119000 Sobic001G474600 Sobic001G474600 Sobic003G280800--Sobic001G474600 Sobic007G117400 Sobic007G117400 Sobic003G280800--Sobic007G117400 Sobic006G216800 Sobic006G216800 Sobic003G280800--Sobic006G216800 Sobic003G372700 Sobic003G372700 Sobic003G280800--Sobic003G372700 Sobic003G254000 Sobic003G254000 Sobic005G039500--Sobic003G254000 Sobic001G067850 Sobic001G067850 Sobic005G039500--Sobic001G067850 Sobic005G039500--Sobic003G113200 Sobic001G261573 Sobic001G261573 Sobic005G039500--Sobic001G261573 Sobic003G429650 Sobic003G429650 Sobic005G039500--Sobic003G429650 Sobic009G212700 Sobic009G212700 Sobic005G039500--Sobic009G212700 Sobic002G243900 Sobic002G243900 Sobic005G039500--Sobic002G243900 Sobic004G035000 Sobic004G035000 Sobic005G039500--Sobic004G035000 Sobic007G037900 Sobic007G037900 Sobic005G039500--Sobic007G037900 Sobic007G178700--Sobic009G127900 Sobic007G178700--Sobic003G268300 Sobic007G178700--Sobic002G243900 Sobic003G087400 Sobic003G087400 Sobic007G178700--Sobic003G087400 Sobic004G007100 Sobic004G007100 Sobic007G178700--Sobic004G007100 Sobic001G162300 Sobic001G162300 Sobic007G178700--Sobic001G162300 Sobic001G446900 Sobic001G446900 Sobic007G178700--Sobic001G446900 Sobic005G144400 Sobic005G144400 Sobic007G178700--Sobic005G144400 Sobic001G420200 Sobic001G420200 Sobic007G178700--Sobic001G420200 Sobic006G209850--Sobic006G128900 Sobic006G209850--Sobic001G511500 Sobic006G209850--Sobic003G280800 Sobic010G277500 Sobic010G277500 Sobic006G209850--Sobic010G277500 Sobic006G209850--Sobic008G024600 Sobic002G053000 Sobic002G053000 Sobic006G209850--Sobic002G053000 Sobic010G129200 Sobic010G129200 Sobic006G209850--Sobic010G129200 Sobic004G145500 Sobic004G145500 Sobic006G209850--Sobic004G145500 Sobic006G209850--Sobic002G243900 Sobic008G024600--Sobic006G209850 Sobic008G024600--Sobic002G053000 Sobic008G024600--Sobic006G128900 Sobic009G040700 Sobic009G040700 Sobic008G024600--Sobic009G040700 Sobic008G024600--Sobic010G129200 Sobic002G158700 Sobic002G158700 Sobic008G024600--Sobic002G158700 Sobic002G343800 Sobic002G343800 Sobic008G024600--Sobic002G343800 Sobic008G024600--Sobic003G280800 Sobic005G045300 Sobic005G045300 Sobic008G024600--Sobic005G045300 Sobic005G032800--Sobic003G280800 Sobic005G032800--Sobic001G474600 Sobic005G032800--Sobic002G173000 Sobic005G032800--Sobic006G021250 Sobic005G032800--Sobic002G134200 Sobic002G169633 Sobic002G169633 Sobic005G032800--Sobic002G169633 Sobic001G498600 Sobic001G498600 Sobic005G032800--Sobic001G498600 Sobic010G112000 Sobic010G112000 Sobic005G032800--Sobic010G112000 Sobic001G292200 Sobic001G292200 Sobic005G032800--Sobic001G292200
Octagon: transcription factors


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