Gene annotation
Transcriptome id Sobic.002G173000.1,Sobic.002G173000.2,Sobic.002G173000.3
Synonym
Functional annotation disease resistance protein RGA2, putative, expressed
UniProt C5X9V8 , A0A1W0W4K0 , A0A1W0W4I8
Pfam PF13191 PF00931
Panther DB PTHR23155 PTHR23155:SF635
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os09g15850.1,LOC_Os01g15580.1 : disease resistance protein RGA2, putative, expressed,Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ89858
Barley HORVU5Hr1G056360.15 , HORVU5Hr1G056360.16 , HORVU5Hr1G056360.11 , HORVU5Hr1G056360.13 , HORVU5Hr1G056360.9 , HORVU5Hr1G056360.8 , HORVU5Hr1G056360.1 , HORVU5Hr1G056360.3 , HORVU5Hr1G056360.2 , HORVU5Hr1G056360.5 , HORVU5Hr1G056360.7 , HORVU5Hr1G056360.6 , HORVU5Hr1G056360.14 , HORVU5Hr1G056360.17 , HORVU5Hr1G056360.4
Wheat TraesCS5B02G182800 , TraesCS5D02G189800 , TraesCS5D02G189800 , TraesCS5D02G189800 , TraesCS5D02G189800 , TraesCS5A02G184800 , TraesCS5B02G182800 , TraesCS5B02G182800 , TraesCS5B02G182800 , TraesCS5B02G182800 , TraesCS5B02G182800 , TraesCS5B02G182800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G182900 expressed protein -
2 Sobic.001G214300 expressed protein -
3 Sobic.005G032800 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
4 Sobic.006G021250 - -
5 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
6 Sobic.008G027000 rp1, putative, expressed -
7 Sobic.001G287201 - -
8 Sobic.001G318432 - -
9 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
10 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
11 Sobic.004G341900 lecithine cholesterol acyltransferase, putative, expressed -
12 Sobic.005G090401 - -
13 Sobic.002G161900 NBS-LRR disease resistance protein, putative, expressed -
14 Sobic.005G019600 rp3 protein, putative, expressed -
15 Sobic.006G105400 expressed protein -
16 Sobic.003G429650 - -
17 Sobic.003G113200 5-nucleotidase domain-containing protein, putative, expressed -
18 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
19 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
20 Sobic.009G221000 NBS-LRR disease resistance protein, putative, expressed -


Gene co-expression network
sample Sobic002G173000 Sobic002G173000 Sobic006G182900 Sobic006G182900 Sobic002G173000--Sobic006G182900 Sobic001G214300 Sobic001G214300 Sobic002G173000--Sobic001G214300 Sobic005G032800 Sobic005G032800 Sobic002G173000--Sobic005G032800 Sobic006G021250 Sobic006G021250 Sobic002G173000--Sobic006G021250 Sobic010G248700 Sobic010G248700 Sobic002G173000--Sobic010G248700 Sobic008G027000 Sobic008G027000 Sobic002G173000--Sobic008G027000 Sobic001G287201 Sobic001G287201 Sobic002G173000--Sobic001G287201 Sobic001G318432 Sobic001G318432 Sobic002G173000--Sobic001G318432 Sobic001G474600 Sobic001G474600 Sobic002G173000--Sobic001G474600 Sobic003G429650 Sobic003G429650 Sobic006G182900--Sobic003G429650 Sobic006G048500 Sobic006G048500 Sobic006G182900--Sobic006G048500 Sobic007G161000 Sobic007G161000 Sobic006G182900--Sobic007G161000 Sobic001G365900 Sobic001G365900 Sobic006G182900--Sobic001G365900 Sobic007G116200 Sobic007G116200 Sobic006G182900--Sobic007G116200 Sobic004G096600 Sobic004G096600 Sobic006G182900--Sobic004G096600 Sobic002G134200 Sobic002G134200 Sobic006G182900--Sobic002G134200 Sobic006G182900--Sobic001G214300 Sobic009G209300 Sobic009G209300 Sobic006G182900--Sobic009G209300 Sobic004G341900 Sobic004G341900 Sobic001G214300--Sobic004G341900 Sobic003G148000 Sobic003G148000 Sobic001G214300--Sobic003G148000 Sobic002G006900 Sobic002G006900 Sobic001G214300--Sobic002G006900 Sobic005G144400 Sobic005G144400 Sobic001G214300--Sobic005G144400 Sobic003G176500 Sobic003G176500 Sobic001G214300--Sobic003G176500 Sobic003G029700 Sobic003G029700 Sobic001G214300--Sobic003G029700 Sobic002G243900 Sobic002G243900 Sobic001G214300--Sobic002G243900 Sobic001G214300--Sobic006G048500 Sobic007G096600 Sobic007G096600 Sobic001G214300--Sobic007G096600 Sobic003G280800 Sobic003G280800 Sobic005G032800--Sobic003G280800 Sobic005G032800--Sobic001G474600 Sobic005G032800--Sobic002G173000 Sobic005G032800--Sobic006G021250 Sobic005G032800--Sobic002G134200 Sobic002G169633 Sobic002G169633 Sobic005G032800--Sobic002G169633 Sobic001G498600 Sobic001G498600 Sobic005G032800--Sobic001G498600 Sobic010G112000 Sobic010G112000 Sobic005G032800--Sobic010G112000 Sobic001G292200 Sobic001G292200 Sobic005G032800--Sobic001G292200 Sobic006G209850 Sobic006G209850 Sobic006G021250--Sobic006G209850 Sobic006G021250--Sobic003G280800 Sobic008G024600 Sobic008G024600 Sobic006G021250--Sobic008G024600 Sobic006G021250--Sobic002G173000 Sobic003G113200 Sobic003G113200 Sobic006G021250--Sobic003G113200 Sobic005G079025 Sobic005G079025 Sobic006G021250--Sobic005G079025 Sobic006G021250--Sobic005G032800 Sobic006G128900 Sobic006G128900 Sobic006G021250--Sobic006G128900 Sobic005G077466 Sobic005G077466 Sobic006G021250--Sobic005G077466 Sobic010G248700--Sobic001G214300 Sobic008G130100 Sobic008G130100 Sobic010G248700--Sobic008G130100 Sobic010G248700--Sobic002G173000 Sobic010G256700 Sobic010G256700 Sobic010G248700--Sobic010G256700 Sobic010G248700--Sobic004G341900 Sobic010G248700--Sobic001G365900 Sobic002G104100 Sobic002G104100 Sobic010G248700--Sobic002G104100 Sobic010G248700--Sobic003G148000 Sobic001G454500 Sobic001G454500 Sobic010G248700--Sobic001G454500 Sobic001G272532 Sobic001G272532 Sobic008G027000--Sobic001G272532 Sobic003G020000 Sobic003G020000 Sobic008G027000--Sobic003G020000 Sobic008G027000--Sobic002G173000 Sobic009G104201 Sobic009G104201 Sobic008G027000--Sobic009G104201 Sobic010G225226 Sobic010G225226 Sobic008G027000--Sobic010G225226 Sobic008G026900 Sobic008G026900 Sobic008G027000--Sobic008G026900 Sobic005G090401 Sobic005G090401 Sobic008G027000--Sobic005G090401 Sobic004G007100 Sobic004G007100 Sobic008G027000--Sobic004G007100 Sobic003G056100 Sobic003G056100 Sobic008G027000--Sobic003G056100 Sobic001G287201--Sobic003G429650 Sobic001G287201--Sobic003G280800 Sobic001G287201--Sobic002G243900 Sobic001G287201--Sobic006G048500 Sobic001G287201--Sobic004G007100 Sobic001G287201--Sobic006G182900 Sobic001G287201--Sobic002G006900 Sobic001G287201--Sobic007G096600 Sobic001G287201--Sobic009G104201 Sobic001G318432--Sobic001G214300 Sobic006G048600 Sobic006G048600 Sobic001G318432--Sobic006G048600 Sobic001G318432--Sobic003G029700 Sobic006G228500 Sobic006G228500 Sobic001G318432--Sobic006G228500 Sobic001G318432--Sobic004G341900 Sobic001G318432--Sobic006G048500 Sobic001G318432--Sobic003G429650 Sobic001G318432--Sobic002G006900 Sobic001G318432--Sobic006G182900 Sobic001G474600--Sobic003G280800 Sobic009G166300 Sobic009G166300 Sobic001G474600--Sobic009G166300 Sobic001G125200 Sobic001G125200 Sobic001G474600--Sobic001G125200 Sobic003G372700 Sobic003G372700 Sobic001G474600--Sobic003G372700 Sobic007G217000 Sobic007G217000 Sobic001G474600--Sobic007G217000 Sobic007G096000 Sobic007G096000 Sobic001G474600--Sobic007G096000 Sobic007G207000 Sobic007G207000 Sobic001G474600--Sobic007G207000 Sobic009G191000 Sobic009G191000 Sobic001G474600--Sobic009G191000 Sobic001G241200 Sobic001G241200 Sobic001G474600--Sobic001G241200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.