Gene annotation
Transcriptome id Sobic.008G027000.1
Synonym Sb08g002350
Functional annotation rp1, putative, expressed
UniProt C5YR76
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF627
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os01g57310.2 : rp1, putative, expressed
MaizeGDB (Corn) Zm00025a053792 , Zm00025a053795 , Zm00025a053794 , Zm00025a053796 , Zm00025a053800
Brachypodium PNT72981 , KQK10078 , PNT72980
Barley HORVU7Hr1G001540.44 , HORVU7Hr1G001540.45 , HORVU7Hr1G001540.40 , HORVU7Hr1G001540.41 , HORVU7Hr1G001540.42 , HORVU7Hr1G001540.43 , HORVU3Hr1G076910.14 , HORVU3Hr1G076910.15 , HORVU3Hr1G076910.16 , HORVU3Hr1G076910.10 , HORVU3Hr1G076910.11 , HORVU3Hr1G076910.12 , HORVU3Hr1G076910.13 , HORVU3Hr1G076910.8 , HORVU3Hr1G076910.9 , HORVU3Hr1G076910.6 , HORVU3Hr1G076910.7 , HORVU3Hr1G076910.4 , HORVU3Hr1G076910.5 , HORVU3Hr1G076910.2 , HORVU3Hr1G076910.3 , HORVU3Hr1G076910.1 , HORVU7Hr1G001540.27 , HORVU7Hr1G001540.26 , HORVU7Hr1G001540.9 , HORVU7Hr1G001540.8 , HORVU7Hr1G001540.3 , HORVU7Hr1G001540.2 , HORVU7Hr1G001540.1 , HORVU7Hr1G001540.7 , HORVU7Hr1G001540.6 , HORVU7Hr1G001540.5 , HORVU7Hr1G001540.4 , HORVU7Hr1G001540.19 , HORVU7Hr1G001540.18 , HORVU7Hr1G001540.13 , HORVU7Hr1G001540.12 , HORVU7Hr1G001540.11 , HORVU7Hr1G001540.10 , HORVU7Hr1G001540.17 , HORVU7Hr1G001540.16 , HORVU7Hr1G001540.15 , HORVU7Hr1G001540.14 , HORVU7Hr1G001670.1 , HORVU7Hr1G001670.2 , HORVU7Hr1G001540.22 , HORVU7Hr1G001540.20 , HORVU7Hr1G001540.21 , HORVU7Hr1G001540.24 , HORVU7Hr1G001540.25 , HORVU7Hr1G001540.39 , HORVU7Hr1G001540.38 , HORVU7Hr1G001540.35 , HORVU7Hr1G001540.34 , HORVU7Hr1G001540.37 , HORVU7Hr1G001540.36 , HORVU7Hr1G001540.31 , HORVU7Hr1G001540.30 , HORVU7Hr1G001540.33 , HORVU7Hr1G001540.32 , HORVU7Hr1G001540.23 , HORVU7Hr1G001540.28 , HORVU7Hr1G001540.29
Wheat TraesCS3D02G314300 , TraesCS3D02G314300 , TraesCS3D02G314300 , TraesCS3D02G314300 , TraesCS4A02G479700 , TraesCS1B02G400800 , TraesCS4A02G477300 , TraesCS4A02G475900 , TraesCS4A02G475400 , TraesCS7D02G012900 , TraesCS4A02G480300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G272532 - -
2 Sobic.003G020000 - -
3 Sobic.002G173000 disease resistance protein RGA2, putative, expressed -
4 Sobic.009G104201 - -
5 Sobic.010G225226 - -
6 Sobic.008G026900 rp1, putative, expressed -
7 Sobic.005G090401 - -
8 Sobic.004G007100 - -
9 Sobic.003G056100 transcription initiation factor, putative, expressed K03129: transcription initiation factor TFIID subunit 4
10 Sobic.004G341900 lecithine cholesterol acyltransferase, putative, expressed -
11 Sobic.003G113200 5-nucleotidase domain-containing protein, putative, expressed -
12 Sobic.007G178700 - -
13 Sobic.003G087400 - -
14 Sobic.009G221000 NBS-LRR disease resistance protein, putative, expressed -
15 Sobic.009G127900 - -
16 Sobic.001G214300 expressed protein -
17 Sobic.001G287201 - -
18 Sobic.005G141801 - -
19 Sobic.005G019600 rp3 protein, putative, expressed -
20 Sobic.008G055432 - -


Gene co-expression network
sample Sobic008G027000 Sobic008G027000 Sobic001G272532 Sobic001G272532 Sobic008G027000--Sobic001G272532 Sobic003G020000 Sobic003G020000 Sobic008G027000--Sobic003G020000 Sobic002G173000 Sobic002G173000 Sobic008G027000--Sobic002G173000 Sobic009G104201 Sobic009G104201 Sobic008G027000--Sobic009G104201 Sobic010G225226 Sobic010G225226 Sobic008G027000--Sobic010G225226 Sobic008G026900 Sobic008G026900 Sobic008G027000--Sobic008G026900 Sobic005G090401 Sobic005G090401 Sobic008G027000--Sobic005G090401 Sobic004G007100 Sobic004G007100 Sobic008G027000--Sobic004G007100 Sobic003G056100 Sobic003G056100 Sobic008G027000--Sobic003G056100 Sobic001G272532--Sobic010G225226 Sobic001G272532--Sobic008G027000 Sobic001G288301 Sobic001G288301 Sobic001G272532--Sobic001G288301 Sobic001G272532--Sobic003G020000 Sobic005G141801 Sobic005G141801 Sobic001G272532--Sobic005G141801 Sobic001G272532--Sobic009G104201 Sobic006G088580 Sobic006G088580 Sobic001G272532--Sobic006G088580 Sobic010G057700 Sobic010G057700 Sobic001G272532--Sobic010G057700 Sobic007G178700 Sobic007G178700 Sobic001G272532--Sobic007G178700 Sobic003G020000--Sobic009G104201 Sobic003G020000--Sobic010G225226 Sobic003G020000--Sobic008G027000 Sobic003G020000--Sobic004G007100 Sobic003G372700 Sobic003G372700 Sobic003G020000--Sobic003G372700 Sobic003G087400 Sobic003G087400 Sobic003G020000--Sobic003G087400 Sobic002G006900 Sobic002G006900 Sobic003G020000--Sobic002G006900 Sobic003G020000--Sobic007G178700 Sobic001G474600 Sobic001G474600 Sobic003G020000--Sobic001G474600 Sobic006G182900 Sobic006G182900 Sobic002G173000--Sobic006G182900 Sobic001G214300 Sobic001G214300 Sobic002G173000--Sobic001G214300 Sobic005G032800 Sobic005G032800 Sobic002G173000--Sobic005G032800 Sobic006G021250 Sobic006G021250 Sobic002G173000--Sobic006G021250 Sobic010G248700 Sobic010G248700 Sobic002G173000--Sobic010G248700 Sobic002G173000--Sobic008G027000 Sobic001G287201 Sobic001G287201 Sobic002G173000--Sobic001G287201 Sobic001G318432 Sobic001G318432 Sobic002G173000--Sobic001G318432 Sobic002G173000--Sobic001G474600 Sobic009G104201--Sobic004G007100 Sobic009G104201--Sobic003G087400 Sobic008G084700 Sobic008G084700 Sobic009G104201--Sobic008G084700 Sobic009G104201--Sobic002G006900 Sobic009G104201--Sobic003G372700 Sobic007G096600 Sobic007G096600 Sobic009G104201--Sobic007G096600 Sobic002G243900 Sobic002G243900 Sobic009G104201--Sobic002G243900 Sobic009G104201--Sobic007G178700 Sobic003G268300 Sobic003G268300 Sobic009G104201--Sobic003G268300 Sobic010G225226--Sobic001G272532 Sobic010G225226--Sobic009G104201 Sobic010G225226--Sobic003G020000 Sobic010G225226--Sobic001G288301 Sobic010G225226--Sobic007G178700 Sobic010G225226--Sobic003G087400 Sobic010G225226--Sobic004G007100 Sobic003G176400 Sobic003G176400 Sobic010G225226--Sobic003G176400 Sobic002G144966 Sobic002G144966 Sobic010G225226--Sobic002G144966 Sobic008G026900--Sobic008G027000 Sobic009G161600 Sobic009G161600 Sobic008G026900--Sobic009G161600 Sobic001G111900 Sobic001G111900 Sobic008G026900--Sobic001G111900 Sobic008G026900--Sobic002G173000 Sobic001G132300 Sobic001G132300 Sobic008G026900--Sobic001G132300 Sobic003G113200 Sobic003G113200 Sobic008G026900--Sobic003G113200 Sobic008G026900--Sobic007G178700 Sobic009G127900 Sobic009G127900 Sobic008G026900--Sobic009G127900 Sobic001G446900 Sobic001G446900 Sobic008G026900--Sobic001G446900 Sobic005G090401--Sobic004G007100 Sobic005G090401--Sobic006G182900 Sobic006G048500 Sobic006G048500 Sobic005G090401--Sobic006G048500 Sobic006G048600 Sobic006G048600 Sobic005G090401--Sobic006G048600 Sobic005G090401--Sobic002G173000 Sobic005G090401--Sobic002G243900 Sobic005G110200 Sobic005G110200 Sobic005G090401--Sobic005G110200 Sobic007G161300 Sobic007G161300 Sobic005G090401--Sobic007G161300 Sobic005G090401--Sobic005G032800 Sobic004G007100--Sobic006G048500 Sobic004G007100--Sobic002G243900 Sobic005G144400 Sobic005G144400 Sobic004G007100--Sobic005G144400 Sobic004G007100--Sobic006G048600 Sobic004G007100--Sobic007G178700 Sobic004G007100--Sobic009G104201 Sobic004G007100--Sobic003G087400 Sobic004G007100--Sobic002G006900 Sobic002G180666 Sobic002G180666 Sobic004G007100--Sobic002G180666 Sobic001G125200 Sobic001G125200 Sobic003G056100--Sobic001G125200 Sobic003G056100--Sobic002G006900 Sobic008G067600 Sobic008G067600 Sobic003G056100--Sobic008G067600 Sobic001G512700 Sobic001G512700 Sobic003G056100--Sobic001G512700 Sobic001G497300 Sobic001G497300 Sobic003G056100--Sobic001G497300 Sobic002G315200 Sobic002G315200 Sobic003G056100--Sobic002G315200 Sobic003G056100--Sobic009G104201 Sobic003G056100--Sobic003G087400 Sobic007G217000 Sobic007G217000 Sobic003G056100--Sobic007G217000
Octagon: transcription factors


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