Gene annotation
Transcriptome id Sobic.001G214300.2,Sobic.001G214300.3,Sobic.001G214300.1
Synonym Sb01g018910, EX1
Functional annotation expressed protein
UniProt A0A1B6QK52
Pfam PF12014
Panther DB PTHR33917 PTHR33917:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33630 : Protein of unknown function (DUF3506)
RAP-DB (Rice) LOC_Os10g34400.2 : expressed protein
MaizeGDB (Corn) Zm00025a017560 , Zm00025a006555 , Zm00025a049575
Brachypodium KQJ97185 , KQJ97184 , PNT67582 , PNT67583
Barley HORVU1Hr1G042650.14 , HORVU1Hr1G042650.15 , HORVU1Hr1G042650.12 , HORVU1Hr1G042650.13 , HORVU1Hr1G042650.10 , HORVU1Hr1G042650.11 , HORVU1Hr1G042650.4 , HORVU1Hr1G042650.5 , HORVU1Hr1G042650.6 , HORVU1Hr1G042650.7 , HORVU1Hr1G042650.2 , HORVU1Hr1G042650.3 , HORVU1Hr1G042650.8 , HORVU1Hr1G042650.9
Wheat TraesCS1A02G160700 , TraesCS1A02G160700 , TraesCS1A02G160700 , TraesCS1A02G160700 , TraesCS1A02G160700 , TraesCS1B02G177400 , TraesCS1B02G177400 , TraesCS1B02G177400 , TraesCS1D02G157900 , TraesCS1D02G157900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G341900 lecithine cholesterol acyltransferase, putative, expressed -
2 Sobic.003G148000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
3 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.005G144400 - -
5 Sobic.003G176500 - -
6 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
7 Sobic.002G243900 - -
8 Sobic.006G048500 - -
9 Sobic.007G096600 - -
10 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
11 Sobic.006G105400 expressed protein -
12 Sobic.003G372700 expressed protein -
13 Sobic.003G429650 - -
14 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
15 Sobic.001G365900 PWWP domain containing protein, expressed -
16 Sobic.001G318432 - -
17 Sobic.006G182900 expressed protein -
18 Sobic.004G007100 - -
19 Sobic.003G332800 GTPase-activating protein, putative, expressed -
20 Sobic.010G153700 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant


Gene co-expression network
sample Sobic001G214300 Sobic001G214300 Sobic004G341900 Sobic004G341900 Sobic001G214300--Sobic004G341900 Sobic003G148000 Sobic003G148000 Sobic001G214300--Sobic003G148000 Sobic002G006900 Sobic002G006900 Sobic001G214300--Sobic002G006900 Sobic005G144400 Sobic005G144400 Sobic001G214300--Sobic005G144400 Sobic003G176500 Sobic003G176500 Sobic001G214300--Sobic003G176500 Sobic003G029700 Sobic003G029700 Sobic001G214300--Sobic003G029700 Sobic002G243900 Sobic002G243900 Sobic001G214300--Sobic002G243900 Sobic006G048500 Sobic006G048500 Sobic001G214300--Sobic006G048500 Sobic007G096600 Sobic007G096600 Sobic001G214300--Sobic007G096600 Sobic004G341900--Sobic001G214300 Sobic004G341900--Sobic003G029700 Sobic004G341900--Sobic002G006900 Sobic010G013800 Sobic010G013800 Sobic004G341900--Sobic010G013800 Sobic004G341900--Sobic003G176500 Sobic009G191000 Sobic009G191000 Sobic004G341900--Sobic009G191000 Sobic009G026500 Sobic009G026500 Sobic004G341900--Sobic009G026500 Sobic008G188900 Sobic008G188900 Sobic004G341900--Sobic008G188900 Sobic006G048600 Sobic006G048600 Sobic004G341900--Sobic006G048600 Sobic003G148000--Sobic005G144400 Sobic002G180666 Sobic002G180666 Sobic003G148000--Sobic002G180666 Sobic002G145101 Sobic002G145101 Sobic003G148000--Sobic002G145101 Sobic003G148000--Sobic006G048500 Sobic003G148000--Sobic002G243900 Sobic003G148000--Sobic001G214300 Sobic003G148000--Sobic007G096600 Sobic003G429650 Sobic003G429650 Sobic003G148000--Sobic003G429650 Sobic004G258700 Sobic004G258700 Sobic003G148000--Sobic004G258700 Sobic008G047800 Sobic008G047800 Sobic002G006900--Sobic008G047800 Sobic007G065400 Sobic007G065400 Sobic002G006900--Sobic007G065400 Sobic003G200200 Sobic003G200200 Sobic002G006900--Sobic003G200200 Sobic003G372700 Sobic003G372700 Sobic002G006900--Sobic003G372700 Sobic009G040600 Sobic009G040600 Sobic002G006900--Sobic009G040600 Sobic001G155000 Sobic001G155000 Sobic002G006900--Sobic001G155000 Sobic002G309600 Sobic002G309600 Sobic002G006900--Sobic002G309600 Sobic002G006900--Sobic001G214300 Sobic001G512700 Sobic001G512700 Sobic002G006900--Sobic001G512700 Sobic005G144400--Sobic006G048500 Sobic005G144400--Sobic003G148000 Sobic005G144400--Sobic002G243900 Sobic005G144400--Sobic007G096600 Sobic004G007100 Sobic004G007100 Sobic005G144400--Sobic004G007100 Sobic005G144400--Sobic001G214300 Sobic005G144400--Sobic003G176500 Sobic005G144400--Sobic003G429650 Sobic007G178700 Sobic007G178700 Sobic005G144400--Sobic007G178700 Sobic003G176500--Sobic007G096600 Sobic003G176500--Sobic002G243900 Sobic003G176500--Sobic002G006900 Sobic003G176500--Sobic005G144400 Sobic003G176500--Sobic001G214300 Sobic003G176500--Sobic003G200200 Sobic003G176500--Sobic007G178700 Sobic003G176500--Sobic003G148000 Sobic003G268300 Sobic003G268300 Sobic003G176500--Sobic003G268300 Sobic003G029700--Sobic004G341900 Sobic003G029700--Sobic001G214300 Sobic003G029700--Sobic010G013800 Sobic003G029700--Sobic008G047800 Sobic001G497300 Sobic001G497300 Sobic003G029700--Sobic001G497300 Sobic003G029700--Sobic002G006900 Sobic003G029700--Sobic009G026500 Sobic003G029700--Sobic009G191000 Sobic001G205200 Sobic001G205200 Sobic003G029700--Sobic001G205200 Sobic002G243900--Sobic007G096600 Sobic002G243900--Sobic004G007100 Sobic002G243900--Sobic005G144400 Sobic002G243900--Sobic003G148000 Sobic002G243900--Sobic006G048500 Sobic002G243900--Sobic007G178700 Sobic002G243900--Sobic003G268300 Sobic002G243900--Sobic002G145101 Sobic002G243900--Sobic003G176500 Sobic006G048500--Sobic004G007100 Sobic006G048500--Sobic005G144400 Sobic006G048500--Sobic002G145101 Sobic006G048500--Sobic003G148000 Sobic006G048500--Sobic003G429650 Sobic006G048500--Sobic002G243900 Sobic006G048500--Sobic006G048600 Sobic006G048500--Sobic002G006900 Sobic006G182900 Sobic006G182900 Sobic006G048500--Sobic006G182900 Sobic007G096600--Sobic002G243900 Sobic007G096600--Sobic003G268300 Sobic007G096600--Sobic003G176500 Sobic001G274200 Sobic001G274200 Sobic007G096600--Sobic001G274200 Sobic007G096600--Sobic003G200200 Sobic007G096600--Sobic005G144400 Sobic007G096600--Sobic003G148000 Sobic003G332800 Sobic003G332800 Sobic007G096600--Sobic003G332800 Sobic001G420200 Sobic001G420200 Sobic007G096600--Sobic001G420200
Octagon: transcription factors


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