Gene annotation
Transcriptome id Sobic.004G341900.1
Synonym ATPSAT1, PSAT1
Functional annotation lecithine cholesterol acyltransferase, putative, expressed
UniProt A0A194YU16
Pfam PF02450
Panther DB PTHR11440 PTHR11440:SF7
NCBI CDD KOG2369; Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase
KEGG Orthology -
Gene Ontology GO:0008374; O-acyltransferase activity GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT1G04010 : phospholipid sterol acyl transferase 1
RAP-DB (Rice) LOC_Os02g56910.1 : lecithine cholesterol acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a022572 , Zm00025a012504
Brachypodium KQK01853 , KQK01852 , PNT69612
Barley HORVU6Hr1G074540.28 , HORVU6Hr1G074540.21 , HORVU6Hr1G074540.20 , HORVU6Hr1G074540.23 , HORVU6Hr1G074540.22 , HORVU6Hr1G074540.25 , HORVU6Hr1G074540.24 , HORVU6Hr1G074540.27 , HORVU6Hr1G074540.26 , HORVU6Hr1G074540.8 , HORVU6Hr1G074540.9 , HORVU6Hr1G074540.6 , HORVU6Hr1G074540.7 , HORVU6Hr1G074540.4 , HORVU6Hr1G074540.5 , HORVU6Hr1G074540.2 , HORVU6Hr1G074540.3 , HORVU6Hr1G074540.1 , HORVU6Hr1G074540.49 , HORVU6Hr1G074540.48 , HORVU6Hr1G074540.43 , HORVU6Hr1G074540.42 , HORVU6Hr1G074540.41 , HORVU6Hr1G074540.40 , HORVU6Hr1G074540.47 , HORVU6Hr1G074540.46 , HORVU6Hr1G074540.45 , HORVU6Hr1G074540.44 , HORVU6Hr1G074540.39 , HORVU6Hr1G074540.36 , HORVU6Hr1G074540.34 , HORVU6Hr1G074540.35 , HORVU6Hr1G074540.32 , HORVU6Hr1G074540.33 , HORVU6Hr1G074540.30 , HORVU6Hr1G074540.31 , HORVU6Hr1G074540.37 , HORVU6Hr1G074540.58 , HORVU6Hr1G074540.59 , HORVU6Hr1G074540.50 , HORVU6Hr1G074540.51 , HORVU6Hr1G074540.52 , HORVU6Hr1G074540.53 , HORVU6Hr1G074540.54 , HORVU6Hr1G074540.55 , HORVU6Hr1G074540.56 , HORVU6Hr1G074540.14 , HORVU6Hr1G074540.15 , HORVU6Hr1G074540.16 , HORVU6Hr1G074540.17 , HORVU6Hr1G074540.10 , HORVU6Hr1G074540.11 , HORVU6Hr1G074540.12 , HORVU6Hr1G074540.13 , HORVU6Hr1G074540.18 , HORVU6Hr1G074540.19
Wheat TraesCS6A02G300600 , TraesCS6B02G330300 , TraesCS6B02G330300 , TraesCS6D02G280500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G214300 expressed protein -
2 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
3 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.010G013800 START domain containing protein, expressed -
5 Sobic.003G176500 - -
6 Sobic.009G191000 MATH domain containing protein, expressed -
7 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
8 Sobic.008G188900 homeobox domain containing protein, expressed -
9 Sobic.006G048600 - -
10 Sobic.003G372700 expressed protein -
11 Sobic.010G153700 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
12 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
13 Sobic.001G365900 PWWP domain containing protein, expressed -
14 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
15 Sobic.003G332800 GTPase-activating protein, putative, expressed -
16 Sobic.001G318432 - -
17 Sobic.006G182900 expressed protein -
18 Sobic.005G144400 - -
19 Sobic.006G048500 - -
20 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G341900 Sobic004G341900 Sobic001G214300 Sobic001G214300 Sobic004G341900--Sobic001G214300 Sobic003G029700 Sobic003G029700 Sobic004G341900--Sobic003G029700 Sobic002G006900 Sobic002G006900 Sobic004G341900--Sobic002G006900 Sobic010G013800 Sobic010G013800 Sobic004G341900--Sobic010G013800 Sobic003G176500 Sobic003G176500 Sobic004G341900--Sobic003G176500 Sobic009G191000 Sobic009G191000 Sobic004G341900--Sobic009G191000 Sobic009G026500 Sobic009G026500 Sobic004G341900--Sobic009G026500 Sobic008G188900 Sobic008G188900 Sobic004G341900--Sobic008G188900 Sobic006G048600 Sobic006G048600 Sobic004G341900--Sobic006G048600 Sobic001G214300--Sobic004G341900 Sobic003G148000 Sobic003G148000 Sobic001G214300--Sobic003G148000 Sobic001G214300--Sobic002G006900 Sobic005G144400 Sobic005G144400 Sobic001G214300--Sobic005G144400 Sobic001G214300--Sobic003G176500 Sobic001G214300--Sobic003G029700 Sobic002G243900 Sobic002G243900 Sobic001G214300--Sobic002G243900 Sobic006G048500 Sobic006G048500 Sobic001G214300--Sobic006G048500 Sobic007G096600 Sobic007G096600 Sobic001G214300--Sobic007G096600 Sobic003G029700--Sobic004G341900 Sobic003G029700--Sobic001G214300 Sobic003G029700--Sobic010G013800 Sobic008G047800 Sobic008G047800 Sobic003G029700--Sobic008G047800 Sobic001G497300 Sobic001G497300 Sobic003G029700--Sobic001G497300 Sobic003G029700--Sobic002G006900 Sobic003G029700--Sobic009G026500 Sobic003G029700--Sobic009G191000 Sobic001G205200 Sobic001G205200 Sobic003G029700--Sobic001G205200 Sobic002G006900--Sobic008G047800 Sobic007G065400 Sobic007G065400 Sobic002G006900--Sobic007G065400 Sobic003G200200 Sobic003G200200 Sobic002G006900--Sobic003G200200 Sobic003G372700 Sobic003G372700 Sobic002G006900--Sobic003G372700 Sobic009G040600 Sobic009G040600 Sobic002G006900--Sobic009G040600 Sobic001G155000 Sobic001G155000 Sobic002G006900--Sobic001G155000 Sobic002G309600 Sobic002G309600 Sobic002G006900--Sobic002G309600 Sobic002G006900--Sobic001G214300 Sobic001G512700 Sobic001G512700 Sobic002G006900--Sobic001G512700 Sobic010G013800--Sobic004G341900 Sobic010G013800--Sobic003G029700 Sobic010G013800--Sobic008G188900 Sobic001G318432 Sobic001G318432 Sobic010G013800--Sobic001G318432 Sobic010G013800--Sobic001G214300 Sobic010G013800--Sobic009G191000 Sobic003G229300 Sobic003G229300 Sobic010G013800--Sobic003G229300 Sobic010G013800--Sobic006G048600 Sobic002G411600 Sobic002G411600 Sobic010G013800--Sobic002G411600 Sobic003G176500--Sobic007G096600 Sobic003G176500--Sobic002G243900 Sobic003G176500--Sobic002G006900 Sobic003G176500--Sobic005G144400 Sobic003G176500--Sobic001G214300 Sobic003G176500--Sobic003G200200 Sobic007G178700 Sobic007G178700 Sobic003G176500--Sobic007G178700 Sobic003G176500--Sobic003G148000 Sobic003G268300 Sobic003G268300 Sobic003G176500--Sobic003G268300 Sobic002G008900 Sobic002G008900 Sobic009G191000--Sobic002G008900 Sobic009G191000--Sobic002G411600 Sobic003G422500 Sobic003G422500 Sobic009G191000--Sobic003G422500 Sobic009G053900 Sobic009G053900 Sobic009G191000--Sobic009G053900 Sobic001G289600 Sobic001G289600 Sobic009G191000--Sobic001G289600 Sobic003G313500 Sobic003G313500 Sobic009G191000--Sobic003G313500 Sobic010G247800 Sobic010G247800 Sobic009G191000--Sobic010G247800 Sobic004G034900 Sobic004G034900 Sobic009G191000--Sobic004G034900 Sobic001G365900 Sobic001G365900 Sobic009G191000--Sobic001G365900 Sobic009G026500--Sobic001G365900 Sobic007G126600 Sobic007G126600 Sobic009G026500--Sobic007G126600 Sobic008G192600 Sobic008G192600 Sobic009G026500--Sobic008G192600 Sobic009G026500--Sobic001G214300 Sobic010G153700 Sobic010G153700 Sobic009G026500--Sobic010G153700 Sobic009G026500--Sobic003G372700 Sobic001G290100 Sobic001G290100 Sobic009G026500--Sobic001G290100 Sobic009G026500--Sobic002G006900 Sobic009G026500--Sobic002G008900 Sobic008G188900--Sobic010G013800 Sobic008G188900--Sobic004G341900 Sobic008G188900--Sobic003G029700 Sobic008G188900--Sobic001G214300 Sobic008G188900--Sobic005G144400 Sobic008G188900--Sobic006G048600 Sobic008G188900--Sobic006G048500 Sobic004G007100 Sobic004G007100 Sobic008G188900--Sobic004G007100 Sobic010G097600 Sobic010G097600 Sobic008G188900--Sobic010G097600 Sobic006G048600--Sobic004G007100 Sobic006G048600--Sobic006G048500 Sobic006G048600--Sobic001G318432 Sobic006G105400 Sobic006G105400 Sobic006G048600--Sobic006G105400 Sobic006G048600--Sobic004G341900 Sobic006G048600--Sobic001G205200 Sobic006G048600--Sobic005G144400 Sobic006G048600--Sobic003G148000 Sobic006G048600--Sobic001G214300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.