Gene annotation
Transcriptome id Sobic.010G248700.1
Synonym RPS3, RPM1
Functional annotation disease resistance protein RPM1, putative, expressed
UniProt A0A194YLD4
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF558
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os06g48520.1 : disease resistance protein RPM1, putative, expressed
MaizeGDB (Corn) Zm00025a018337
Brachypodium -
Barley -
Wheat TraesCS7D02G416200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G214300 expressed protein -
2 Sobic.008G130100 protein kinase family protein, putative, expressed -
3 Sobic.002G173000 disease resistance protein RGA2, putative, expressed -
4 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.004G341900 lecithine cholesterol acyltransferase, putative, expressed -
6 Sobic.001G365900 PWWP domain containing protein, expressed -
7 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
8 Sobic.003G148000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
9 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
10 Sobic.003G057233 - -
11 Sobic.010G153700 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
12 Sobic.006G133900 NIN, putative, expressed -
13 Sobic.006G182900 expressed protein -
14 Sobic.003G429650 - -
15 Sobic.006G219150 - -
16 Sobic.001G318432 - -
17 Sobic.006G065600 expressed protein -
18 Sobic.006G105400 expressed protein -
19 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
20 Sobic.005G225800 white-brown complex homolog protein 11, putative, expressed -


Gene co-expression network
sample Sobic010G248700 Sobic010G248700 Sobic001G214300 Sobic001G214300 Sobic010G248700--Sobic001G214300 Sobic008G130100 Sobic008G130100 Sobic010G248700--Sobic008G130100 Sobic002G173000 Sobic002G173000 Sobic010G248700--Sobic002G173000 Sobic010G256700 Sobic010G256700 Sobic010G248700--Sobic010G256700 Sobic004G341900 Sobic004G341900 Sobic010G248700--Sobic004G341900 Sobic001G365900 Sobic001G365900 Sobic010G248700--Sobic001G365900 Sobic002G104100 Sobic002G104100 Sobic010G248700--Sobic002G104100 Sobic003G148000 Sobic003G148000 Sobic010G248700--Sobic003G148000 Sobic001G454500 Sobic001G454500 Sobic010G248700--Sobic001G454500 Sobic001G214300--Sobic004G341900 Sobic001G214300--Sobic003G148000 Sobic002G006900 Sobic002G006900 Sobic001G214300--Sobic002G006900 Sobic005G144400 Sobic005G144400 Sobic001G214300--Sobic005G144400 Sobic003G176500 Sobic003G176500 Sobic001G214300--Sobic003G176500 Sobic003G029700 Sobic003G029700 Sobic001G214300--Sobic003G029700 Sobic002G243900 Sobic002G243900 Sobic001G214300--Sobic002G243900 Sobic006G048500 Sobic006G048500 Sobic001G214300--Sobic006G048500 Sobic007G096600 Sobic007G096600 Sobic001G214300--Sobic007G096600 Sobic008G130100--Sobic001G365900 Sobic008G130100--Sobic001G454500 Sobic006G133900 Sobic006G133900 Sobic008G130100--Sobic006G133900 Sobic010G010700 Sobic010G010700 Sobic008G130100--Sobic010G010700 Sobic003G155100 Sobic003G155100 Sobic008G130100--Sobic003G155100 Sobic004G034900 Sobic004G034900 Sobic008G130100--Sobic004G034900 Sobic002G346200 Sobic002G346200 Sobic008G130100--Sobic002G346200 Sobic010G206900 Sobic010G206900 Sobic008G130100--Sobic010G206900 Sobic007G198300 Sobic007G198300 Sobic008G130100--Sobic007G198300 Sobic006G182900 Sobic006G182900 Sobic002G173000--Sobic006G182900 Sobic002G173000--Sobic001G214300 Sobic005G032800 Sobic005G032800 Sobic002G173000--Sobic005G032800 Sobic006G021250 Sobic006G021250 Sobic002G173000--Sobic006G021250 Sobic002G173000--Sobic010G248700 Sobic008G027000 Sobic008G027000 Sobic002G173000--Sobic008G027000 Sobic001G287201 Sobic001G287201 Sobic002G173000--Sobic001G287201 Sobic001G318432 Sobic001G318432 Sobic002G173000--Sobic001G318432 Sobic001G474600 Sobic001G474600 Sobic002G173000--Sobic001G474600 Sobic007G116200 Sobic007G116200 Sobic010G256700--Sobic007G116200 Sobic003G396200 Sobic003G396200 Sobic010G256700--Sobic003G396200 Sobic010G256700--Sobic006G182900 Sobic001G159400 Sobic001G159400 Sobic010G256700--Sobic001G159400 Sobic010G256700--Sobic010G248700 Sobic007G193700 Sobic007G193700 Sobic010G256700--Sobic007G193700 Sobic010G256700--Sobic006G133900 Sobic010G256700--Sobic001G454500 Sobic010G256700--Sobic002G104100 Sobic004G341900--Sobic001G214300 Sobic004G341900--Sobic003G029700 Sobic004G341900--Sobic002G006900 Sobic010G013800 Sobic010G013800 Sobic004G341900--Sobic010G013800 Sobic004G341900--Sobic003G176500 Sobic009G191000 Sobic009G191000 Sobic004G341900--Sobic009G191000 Sobic009G026500 Sobic009G026500 Sobic004G341900--Sobic009G026500 Sobic008G188900 Sobic008G188900 Sobic004G341900--Sobic008G188900 Sobic006G048600 Sobic006G048600 Sobic004G341900--Sobic006G048600 Sobic001G365900--Sobic010G206900 Sobic001G534700 Sobic001G534700 Sobic001G365900--Sobic001G534700 Sobic001G289600 Sobic001G289600 Sobic001G365900--Sobic001G289600 Sobic001G365900--Sobic008G130100 Sobic002G411600 Sobic002G411600 Sobic001G365900--Sobic002G411600 Sobic002G008900 Sobic002G008900 Sobic001G365900--Sobic002G008900 Sobic001G365900--Sobic009G191000 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400 Sobic004G181600 Sobic004G181600 Sobic002G104100--Sobic004G181600 Sobic002G104100--Sobic006G133900 Sobic006G065600 Sobic006G065600 Sobic002G104100--Sobic006G065600 Sobic004G164400 Sobic004G164400 Sobic002G104100--Sobic004G164400 Sobic003G370700 Sobic003G370700 Sobic002G104100--Sobic003G370700 Sobic001G169900 Sobic001G169900 Sobic002G104100--Sobic001G169900 Sobic002G104100--Sobic010G248700 Sobic002G104100--Sobic001G365900 Sobic002G104100--Sobic006G182900 Sobic003G148000--Sobic005G144400 Sobic002G180666 Sobic002G180666 Sobic003G148000--Sobic002G180666 Sobic002G145101 Sobic002G145101 Sobic003G148000--Sobic002G145101 Sobic003G148000--Sobic006G048500 Sobic003G148000--Sobic002G243900 Sobic003G148000--Sobic001G214300 Sobic003G148000--Sobic007G096600 Sobic003G429650 Sobic003G429650 Sobic003G148000--Sobic003G429650 Sobic004G258700 Sobic004G258700 Sobic003G148000--Sobic004G258700 Sobic003G388100 Sobic003G388100 Sobic001G454500--Sobic003G388100 Sobic001G454500--Sobic008G130100 Sobic001G454500--Sobic006G133900 Sobic001G375100 Sobic001G375100 Sobic001G454500--Sobic001G375100 Sobic001G454500--Sobic001G365900 Sobic008G001200 Sobic008G001200 Sobic001G454500--Sobic008G001200 Sobic001G454500--Sobic010G010700 Sobic001G454500--Sobic003G155100 Sobic003G247500 Sobic003G247500 Sobic001G454500--Sobic003G247500
Octagon: transcription factors


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