Gene annotation
Transcriptome id Sobic.005G225800.2
Synonym ABCG11, WBC11, Sb05g027420, COF1, DSO, ATWBC11
Functional annotation white-brown complex homolog protein 11, putative, expressed
UniProt A0A1Z5RK16
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF295
NCBI CDD KOG0061; Transporter, ABC superfamily (Breast cancer resistance protein)
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G17840 : white-brown complex homolog protein 11
RAP-DB (Rice) LOC_Os12g22284.1 : white-brown complex homolog protein 11, putative, expressed
MaizeGDB (Corn) Zm00025a037579 , Zm00025a029103 , Zm00025a006484 , Zm00025a010478 , Zm00025a045631 , Zm00025a047350
Brachypodium KQJ90618 , KQJ90619 , PNT71605 , KQJ83708 , KQJ83709 , KQK06998 , KQJ86867
Barley HORVU5Hr1G070400.5 , HORVU5Hr1G070400.6 , HORVU5Hr1G070400.7 , HORVU5Hr1G070400.2 , HORVU5Hr1G070400.3 , HORVU6Hr1G027440.13 , HORVU6Hr1G027440.12 , HORVU6Hr1G027440.11 , HORVU6Hr1G027440.10 , HORVU6Hr1G027440.17 , HORVU6Hr1G027440.16 , HORVU6Hr1G027440.15 , HORVU6Hr1G027440.14 , HORVU6Hr1G027440.19 , HORVU6Hr1G027440.18 , HORVU1Hr1G030200.2 , HORVU1Hr1G030200.3 , HORVU1Hr1G030200.1 , HORVU1Hr1G030200.4 , HORVU6Hr1G027440.20 , HORVU5Hr1G070400.22 , HORVU5Hr1G070400.21 , HORVU5Hr1G070400.20 , HORVU2Hr1G090960.9 , HORVU2Hr1G090960.2 , HORVU2Hr1G090960.6 , HORVU2Hr1G090960.7 , HORVU2Hr1G090960.5 , HORVU2Hr1G090960.4 , HORVU5Hr1G070400.14 , HORVU5Hr1G070400.12 , HORVU5Hr1G070400.13 , HORVU5Hr1G070400.18 , HORVU5Hr1G070400.10 , HORVU6Hr1G027440.3 , HORVU6Hr1G027440.1 , HORVU6Hr1G027440.7 , HORVU6Hr1G027440.6 , HORVU6Hr1G027440.5 , HORVU6Hr1G027440.4 , HORVU6Hr1G027440.9 , HORVU6Hr1G027440.8
Wheat TraesCS2A02G374100 , TraesCS2D02G370400 , TraesCS2D02G370400 , TraesCS5D02G257400 , TraesCS6A02G140300 , TraesCSU02G020100 , TraesCS6A02G140300 , TraesCS1A02G126900 , TraesCS6D02G128600 , TraesCS5D02G257000 , TraesCS5A02G249900 , TraesCS5B02G247700 , TraesCS6B02G168800 , TraesCS6B02G168800 , TraesCS7A02G566200 , TraesCS5B02G248000 , TraesCS4A02G308200 , TraesCS5D02G257100 , TraesCS5D02G257100 , TraesCS2A02G374100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G039500 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
2 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
3 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
4 Sobic.002G173000 disease resistance protein RGA2, putative, expressed -
5 Sobic.004G035000 S-adenosyl-L-methionine-dependent methyltransferase mraW, putative, expressed -
6 Sobic.003G254000 PPR repeat domain containing protein, putative, expressed -
7 Sobic.010G176550 - -
8 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
9 Sobic.001G214300 expressed protein -
10 Sobic.009G212700 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
11 Sobic.009G140500 no apical meristem protein, putative, expressed -
12 Sobic.003G028600 phosphoribosylaminoimidazole carboxylase, chloroplast precursor, putative, expressed K11808: phosphoribosylaminoimidazole carboxylase
13 Sobic.001G132300 NB-ARC domain containing protein, expressed -
14 Sobic.006G079400 - -
15 Sobic.003G148000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
16 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
17 Sobic.003G429650 - -
18 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
19 Sobic.009G134500 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
20 Sobic.002G243900 - -


Gene co-expression network
sample Sobic005G225800 Sobic005G225800 Sobic005G039500 Sobic005G039500 Sobic005G225800--Sobic005G039500 Sobic001G035900 Sobic001G035900 Sobic005G225800--Sobic001G035900 Sobic010G248700 Sobic010G248700 Sobic005G225800--Sobic010G248700 Sobic002G173000 Sobic002G173000 Sobic005G225800--Sobic002G173000 Sobic004G035000 Sobic004G035000 Sobic005G225800--Sobic004G035000 Sobic003G254000 Sobic003G254000 Sobic005G225800--Sobic003G254000 Sobic010G176550 Sobic010G176550 Sobic005G225800--Sobic010G176550 Sobic002G006600 Sobic002G006600 Sobic005G225800--Sobic002G006600 Sobic001G214300 Sobic001G214300 Sobic005G225800--Sobic001G214300 Sobic005G039500--Sobic003G254000 Sobic001G067850 Sobic001G067850 Sobic005G039500--Sobic001G067850 Sobic003G113200 Sobic003G113200 Sobic005G039500--Sobic003G113200 Sobic001G261573 Sobic001G261573 Sobic005G039500--Sobic001G261573 Sobic003G429650 Sobic003G429650 Sobic005G039500--Sobic003G429650 Sobic009G212700 Sobic009G212700 Sobic005G039500--Sobic009G212700 Sobic002G243900 Sobic002G243900 Sobic005G039500--Sobic002G243900 Sobic005G039500--Sobic004G035000 Sobic007G037900 Sobic007G037900 Sobic005G039500--Sobic007G037900 Sobic001G035900--Sobic003G254000 Sobic002G031400 Sobic002G031400 Sobic001G035900--Sobic002G031400 Sobic002G064750 Sobic002G064750 Sobic001G035900--Sobic002G064750 Sobic007G099100 Sobic007G099100 Sobic001G035900--Sobic007G099100 Sobic001G274200 Sobic001G274200 Sobic001G035900--Sobic001G274200 Sobic001G035900--Sobic003G429650 Sobic001G035900--Sobic010G176550 Sobic007G161000 Sobic007G161000 Sobic001G035900--Sobic007G161000 Sobic009G024000 Sobic009G024000 Sobic001G035900--Sobic009G024000 Sobic010G248700--Sobic001G214300 Sobic008G130100 Sobic008G130100 Sobic010G248700--Sobic008G130100 Sobic010G248700--Sobic002G173000 Sobic010G256700 Sobic010G256700 Sobic010G248700--Sobic010G256700 Sobic004G341900 Sobic004G341900 Sobic010G248700--Sobic004G341900 Sobic001G365900 Sobic001G365900 Sobic010G248700--Sobic001G365900 Sobic002G104100 Sobic002G104100 Sobic010G248700--Sobic002G104100 Sobic003G148000 Sobic003G148000 Sobic010G248700--Sobic003G148000 Sobic001G454500 Sobic001G454500 Sobic010G248700--Sobic001G454500 Sobic006G182900 Sobic006G182900 Sobic002G173000--Sobic006G182900 Sobic002G173000--Sobic001G214300 Sobic005G032800 Sobic005G032800 Sobic002G173000--Sobic005G032800 Sobic006G021250 Sobic006G021250 Sobic002G173000--Sobic006G021250 Sobic002G173000--Sobic010G248700 Sobic008G027000 Sobic008G027000 Sobic002G173000--Sobic008G027000 Sobic001G287201 Sobic001G287201 Sobic002G173000--Sobic001G287201 Sobic001G318432 Sobic001G318432 Sobic002G173000--Sobic001G318432 Sobic001G474600 Sobic001G474600 Sobic002G173000--Sobic001G474600 Sobic004G035000--Sobic003G254000 Sobic007G076700 Sobic007G076700 Sobic004G035000--Sobic007G076700 Sobic004G142700 Sobic004G142700 Sobic004G035000--Sobic004G142700 Sobic004G035000--Sobic009G212700 Sobic004G035000--Sobic005G039500 Sobic004G035000--Sobic001G035900 Sobic002G114700 Sobic002G114700 Sobic004G035000--Sobic002G114700 Sobic004G035000--Sobic002G031400 Sobic004G035000--Sobic005G225800 Sobic003G254000--Sobic001G035900 Sobic003G254000--Sobic001G261573 Sobic003G254000--Sobic004G035000 Sobic003G254000--Sobic002G031400 Sobic003G254000--Sobic005G039500 Sobic003G254000--Sobic002G064750 Sobic003G254000--Sobic001G274200 Sobic003G254000--Sobic007G099100 Sobic003G254000--Sobic003G429650 Sobic010G176550--Sobic002G031400 Sobic004G034800 Sobic004G034800 Sobic010G176550--Sobic004G034800 Sobic010G176550--Sobic001G261573 Sobic003G217700 Sobic003G217700 Sobic010G176550--Sobic003G217700 Sobic007G185700 Sobic007G185700 Sobic010G176550--Sobic007G185700 Sobic010G176550--Sobic001G035900 Sobic003G234900 Sobic003G234900 Sobic010G176550--Sobic003G234900 Sobic010G005600 Sobic010G005600 Sobic010G176550--Sobic010G005600 Sobic010G032900 Sobic010G032900 Sobic010G176550--Sobic010G032900 Sobic003G017100 Sobic003G017100 Sobic002G006600--Sobic003G017100 Sobic001G198100 Sobic001G198100 Sobic002G006600--Sobic001G198100 Sobic010G002700 Sobic010G002700 Sobic002G006600--Sobic010G002700 Sobic001G169900 Sobic001G169900 Sobic002G006600--Sobic001G169900 Sobic002G006600--Sobic003G429650 Sobic004G164400 Sobic004G164400 Sobic002G006600--Sobic004G164400 Sobic002G006600--Sobic006G182900 Sobic009G209300 Sobic009G209300 Sobic002G006600--Sobic009G209300 Sobic006G105400 Sobic006G105400 Sobic002G006600--Sobic006G105400 Sobic001G214300--Sobic004G341900 Sobic001G214300--Sobic003G148000 Sobic002G006900 Sobic002G006900 Sobic001G214300--Sobic002G006900 Sobic005G144400 Sobic005G144400 Sobic001G214300--Sobic005G144400 Sobic003G176500 Sobic003G176500 Sobic001G214300--Sobic003G176500 Sobic003G029700 Sobic003G029700 Sobic001G214300--Sobic003G029700 Sobic001G214300--Sobic002G243900 Sobic006G048500 Sobic006G048500 Sobic001G214300--Sobic006G048500 Sobic007G096600 Sobic007G096600 Sobic001G214300--Sobic007G096600
Octagon: transcription factors


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