Gene annotation
Transcriptome id Sobic.009G140500.1
Synonym LOV1, Sb09g020590, NAC035, ANAC035, anac034
Functional annotation no apical meristem protein, putative, expressed
UniProt C5YY51
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G02450 : NAC domain containing protein 35
RAP-DB (Rice) LOC_Os05g34600.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a030255 , Zm00025a026505 , Zm00025a037389 , Zm00025a043723 , Zm00025a030263
Brachypodium KQK10957 , KQJ94850 , KQK06213 , KQK10908
Barley HORVU0Hr1G022820.1 , HORVU3Hr1G090440.4 , HORVU3Hr1G090440.5 , HORVU3Hr1G090440.6 , HORVU3Hr1G090440.7 , HORVU3Hr1G090440.1 , HORVU3Hr1G090440.2 , HORVU3Hr1G090440.3 , HORVU3Hr1G090440.8 , HORVU3Hr1G090440.9 , HORVU1Hr1G064300.3 , HORVU1Hr1G064300.4 , HORVU1Hr1G064300.5 , HORVU4Hr1G081450.2 , HORVU4Hr1G081450.3 , HORVU4Hr1G081450.1 , HORVU4Hr1G081450.6 , HORVU4Hr1G081450.4 , HORVU4Hr1G081450.5 , HORVU7Hr1G076250.1 , HORVU7Hr1G076250.3 , HORVU7Hr1G076250.5 , HORVU7Hr1G076250.7 , HORVU7Hr1G076250.6 , HORVU1Hr1G064300.2 , HORVU1Hr1G064300.1 , HORVU3Hr1G090440.10 , HORVU3Hr1G090440.11
Wheat TraesCS4A02G421300 , TraesCS4B02G328600 , TraesCS7D02G062100 , TraesCS7A02G318500 , TraesCS1A02G261800 , TraesCS3B02G436900 , TraesCS7B02G219400 , TraesCS4B02G329100 , TraesCS5A02G500600 , TraesCS3A02G403300 , TraesCS1D02G261800 , TraesCS1B02G272600 , TraesCS7D02G315100 , TraesCS7D02G062400 , TraesCS3D02G398200 , TraesCS5A02G500700 , TraesCS7D02G062300 , TraesCS4A02G421000 , TraesCS4A02G420100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G274200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
2 Sobic.001G067850 - -
3 Sobic.010G123901 - -
4 Sobic.007G037900 oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed -
5 Sobic.004G290800 GRAS family transcription factor(PubMedID : 23915383)@scarecrow, putative, expressed -
6 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
7 Sobic.003G179201 - -
8 Sobic.002G203200 - -
9 Sobic.007G096600 - -
10 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
11 Sobic.001G504000 Citrate transporter protein, putative, expressed -
12 Sobic.009G034200 CBL-interacting protein kinase 1(PubMedID : 26320239)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
13 Sobic.004G065650 - -
14 Sobic.004G188400 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
15 Sobic.003G268300 surp module family protein, putative, expressed -
16 Sobic.006G066650 - -
17 Sobic.003G429650 - -
18 Sobic.001G118100 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
19 Sobic.005G144400 - -
20 Sobic.010G124001 - -


Gene co-expression network
sample Sobic009G140500 Sobic009G140500 Sobic001G274200 Sobic001G274200 Sobic009G140500--Sobic001G274200 Sobic001G067850 Sobic001G067850 Sobic009G140500--Sobic001G067850 Sobic010G123901 Sobic010G123901 Sobic009G140500--Sobic010G123901 Sobic007G037900 Sobic007G037900 Sobic009G140500--Sobic007G037900 Sobic004G290800 Sobic004G290800 Sobic009G140500--Sobic004G290800 Sobic001G420200 Sobic001G420200 Sobic009G140500--Sobic001G420200 Sobic003G179201 Sobic003G179201 Sobic009G140500--Sobic003G179201 Sobic002G203200 Sobic002G203200 Sobic009G140500--Sobic002G203200 Sobic007G096600 Sobic007G096600 Sobic009G140500--Sobic007G096600 Sobic001G274200--Sobic001G420200 Sobic001G274200--Sobic007G096600 Sobic003G268300 Sobic003G268300 Sobic001G274200--Sobic003G268300 Sobic008G173900 Sobic008G173900 Sobic001G274200--Sobic008G173900 Sobic002G144933 Sobic002G144933 Sobic001G274200--Sobic002G144933 Sobic001G133466 Sobic001G133466 Sobic001G274200--Sobic001G133466 Sobic001G274200--Sobic007G037900 Sobic002G243900 Sobic002G243900 Sobic001G274200--Sobic002G243900 Sobic001G274200--Sobic010G123901 Sobic001G067850--Sobic002G243900 Sobic007G178700 Sobic007G178700 Sobic001G067850--Sobic007G178700 Sobic001G067850--Sobic001G274200 Sobic001G067850--Sobic009G140500 Sobic001G067850--Sobic001G420200 Sobic005G144400 Sobic005G144400 Sobic001G067850--Sobic005G144400 Sobic001G067850--Sobic007G096600 Sobic001G067850--Sobic007G037900 Sobic006G088580 Sobic006G088580 Sobic001G067850--Sobic006G088580 Sobic010G123901--Sobic001G274200 Sobic010G123901--Sobic009G140500 Sobic010G123901--Sobic001G133466 Sobic010G123901--Sobic001G420200 Sobic010G123901--Sobic001G067850 Sobic010G124001 Sobic010G124001 Sobic010G123901--Sobic010G124001 Sobic010G123901--Sobic007G096600 Sobic010G123901--Sobic007G037900 Sobic010G123901--Sobic002G203200 Sobic007G037900--Sobic003G268300 Sobic007G037900--Sobic001G420200 Sobic006G246900 Sobic006G246900 Sobic007G037900--Sobic006G246900 Sobic007G037900--Sobic002G144933 Sobic007G037900--Sobic001G274200 Sobic009G127900 Sobic009G127900 Sobic007G037900--Sobic009G127900 Sobic001G162300 Sobic001G162300 Sobic007G037900--Sobic001G162300 Sobic007G037900--Sobic004G290800 Sobic002G157000 Sobic002G157000 Sobic007G037900--Sobic002G157000 Sobic004G290800--Sobic009G127900 Sobic004G290800--Sobic001G420200 Sobic004G290800--Sobic007G178700 Sobic004G290800--Sobic007G037900 Sobic004G290800--Sobic003G268300 Sobic004G290800--Sobic001G162300 Sobic004G290800--Sobic002G157000 Sobic001G111900 Sobic001G111900 Sobic004G290800--Sobic001G111900 Sobic001G446900 Sobic001G446900 Sobic004G290800--Sobic001G446900 Sobic001G420200--Sobic001G274200 Sobic001G420200--Sobic002G157000 Sobic001G420200--Sobic003G268300 Sobic001G420200--Sobic008G173900 Sobic002G248400 Sobic002G248400 Sobic001G420200--Sobic002G248400 Sobic001G420200--Sobic007G096600 Sobic001G420200--Sobic007G037900 Sobic001G420200--Sobic002G144933 Sobic001G420200--Sobic007G178700 Sobic003G429650 Sobic003G429650 Sobic003G179201--Sobic003G429650 Sobic006G048500 Sobic006G048500 Sobic003G179201--Sobic006G048500 Sobic006G216800 Sobic006G216800 Sobic003G179201--Sobic006G216800 Sobic002G133400 Sobic002G133400 Sobic003G179201--Sobic002G133400 Sobic003G332800 Sobic003G332800 Sobic003G179201--Sobic003G332800 Sobic003G148000 Sobic003G148000 Sobic003G179201--Sobic003G148000 Sobic010G202000 Sobic010G202000 Sobic003G179201--Sobic010G202000 Sobic008G162900 Sobic008G162900 Sobic003G179201--Sobic008G162900 Sobic004G082400 Sobic004G082400 Sobic003G179201--Sobic004G082400 Sobic002G203200--Sobic010G124001 Sobic002G203200--Sobic007G037900 Sobic002G203200--Sobic001G067850 Sobic006G082600 Sobic006G082600 Sobic002G203200--Sobic006G082600 Sobic002G203200--Sobic009G140500 Sobic005G130200 Sobic005G130200 Sobic002G203200--Sobic005G130200 Sobic002G165300 Sobic002G165300 Sobic002G203200--Sobic002G165300 Sobic007G211000 Sobic007G211000 Sobic002G203200--Sobic007G211000 Sobic004G196700 Sobic004G196700 Sobic002G203200--Sobic004G196700 Sobic007G096600--Sobic002G243900 Sobic007G096600--Sobic003G268300 Sobic003G176500 Sobic003G176500 Sobic007G096600--Sobic003G176500 Sobic007G096600--Sobic001G274200 Sobic003G200200 Sobic003G200200 Sobic007G096600--Sobic003G200200 Sobic007G096600--Sobic005G144400 Sobic007G096600--Sobic003G148000 Sobic007G096600--Sobic003G332800 Sobic007G096600--Sobic001G420200
Octagon: transcription factors


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