Gene annotation
Transcriptome id Sobic.001G118100.1
Synonym B-box (BBX) protein, Sb01g010420, SbBBX1
Functional annotation B-box (BBX) protein (PubMedID : 30626335)
CCT/B-box zinc finger protein, putative, expressed
UniProt C5WN43
Pfam PF00643 PF06203
Panther DB PTHR31874 PTHR31874:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005622intracellular GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT1G68520 : B-box type zinc finger protein with CCT domain
RAP-DB (Rice) LOC_Os03g50310.1 : CCT/B-box zinc finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a007829 , Zm00025a050390 , Zm00025a017003
Brachypodium PNT74254 , KQK13611
Barley HORVU4Hr1G007420.1 , HORVU4Hr1G007420.2 , HORVU6Hr1G073170.6 , HORVU6Hr1G073170.4 , HORVU6Hr1G073170.5 , HORVU6Hr1G073170.2 , HORVU6Hr1G073170.1 , HORVU6Hr1G073170.7
Wheat TraesCS4B02G045700 , TraesCS4D02G046200 , TraesCS4A02G268500 , TraesCS6D02G274100 , TraesCS6D02G274100
Populus -


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cDNA sequences
Sobic.001G118100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
2 Sobic.006G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cyclin, putative, expressed -
3 Sobic.005G036600 calmodulin-binding protein, putative, expressed -
4 Sobic.009G140500 no apical meristem protein, putative, expressed -
5 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
6 Sobic.001G484800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@acetyltransferase, GNAT family, putative, expressed -
7 Sobic.002G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.004G065650 - -
10 Sobic.008G013600 - -
11 Sobic.007G113800 early-responsive to dehydration protein-related, putative, expressed -
12 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
13 Sobic.006G173000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
14 Sobic.007G173200 IDD5(PubMedID : 24676859)@ZOS8-12 - C2H2 zinc finger protein, expressed -
15 Sobic.009G191100 expressed protein -
16 Sobic.003G161000 powdery mildew resistance protein PM3F, putative, expressed -
17 Sobic.004G241500 expressed protein -
18 Sobic.003G179201 - -
19 Sobic.009G034200 CBL-interacting protein kinase 1(PubMedID : 26320239)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
20 Sobic.001G497200 expressed protein -


Gene co-expression network
sample Sobic001G118100 Sobic001G118100 Sobic004G001300 Sobic004G001300 Sobic001G118100--Sobic004G001300 Sobic006G225200 Sobic006G225200 Sobic001G118100--Sobic006G225200 Sobic005G036600 Sobic005G036600 Sobic001G118100--Sobic005G036600 Sobic009G140500 Sobic009G140500 Sobic001G118100--Sobic009G140500 Sobic004G113800 Sobic004G113800 Sobic001G118100--Sobic004G113800 Sobic001G484800 Sobic001G484800 Sobic001G118100--Sobic001G484800 Sobic002G291700 Sobic002G291700 Sobic001G118100--Sobic002G291700 Sobic007G052900 Sobic007G052900 Sobic001G118100--Sobic007G052900 Sobic004G065650 Sobic004G065650 Sobic001G118100--Sobic004G065650 Sobic004G001300--Sobic001G118100 Sobic007G204900 Sobic007G204900 Sobic004G001300--Sobic007G204900 Sobic008G001000 Sobic008G001000 Sobic004G001300--Sobic008G001000 Sobic003G442700 Sobic003G442700 Sobic004G001300--Sobic003G442700 Sobic003G161000 Sobic003G161000 Sobic004G001300--Sobic003G161000 Sobic001G098301 Sobic001G098301 Sobic004G001300--Sobic001G098301 Sobic003G003600 Sobic003G003600 Sobic004G001300--Sobic003G003600 Sobic003G137100 Sobic003G137100 Sobic004G001300--Sobic003G137100 Sobic001G060401 Sobic001G060401 Sobic004G001300--Sobic001G060401 Sobic006G225200--Sobic001G118100 Sobic003G009700 Sobic003G009700 Sobic006G225200--Sobic003G009700 Sobic006G225200--Sobic001G484800 Sobic006G173000 Sobic006G173000 Sobic006G225200--Sobic006G173000 Sobic002G385700 Sobic002G385700 Sobic006G225200--Sobic002G385700 Sobic006G225200--Sobic002G291700 Sobic003G004200 Sobic003G004200 Sobic006G225200--Sobic003G004200 Sobic001G233400 Sobic001G233400 Sobic006G225200--Sobic001G233400 Sobic007G173200 Sobic007G173200 Sobic006G225200--Sobic007G173200 Sobic005G036600--Sobic001G118100 Sobic001G269300 Sobic001G269300 Sobic005G036600--Sobic001G269300 Sobic005G036600--Sobic007G052900 Sobic006G060200 Sobic006G060200 Sobic005G036600--Sobic006G060200 Sobic006G180432 Sobic006G180432 Sobic005G036600--Sobic006G180432 Sobic006G249050 Sobic006G249050 Sobic005G036600--Sobic006G249050 Sobic005G036600--Sobic004G065650 Sobic001G217700 Sobic001G217700 Sobic005G036600--Sobic001G217700 Sobic009G212700 Sobic009G212700 Sobic005G036600--Sobic009G212700 Sobic001G274200 Sobic001G274200 Sobic009G140500--Sobic001G274200 Sobic001G067850 Sobic001G067850 Sobic009G140500--Sobic001G067850 Sobic010G123901 Sobic010G123901 Sobic009G140500--Sobic010G123901 Sobic007G037900 Sobic007G037900 Sobic009G140500--Sobic007G037900 Sobic004G290800 Sobic004G290800 Sobic009G140500--Sobic004G290800 Sobic001G420200 Sobic001G420200 Sobic009G140500--Sobic001G420200 Sobic003G179201 Sobic003G179201 Sobic009G140500--Sobic003G179201 Sobic002G203200 Sobic002G203200 Sobic009G140500--Sobic002G203200 Sobic007G096600 Sobic007G096600 Sobic009G140500--Sobic007G096600 Sobic010G056200 Sobic010G056200 Sobic004G113800--Sobic010G056200 Sobic004G113800--Sobic007G052900 Sobic004G113800--Sobic009G140500 Sobic001G368400 Sobic001G368400 Sobic004G113800--Sobic001G368400 Sobic004G113800--Sobic001G118100 Sobic009G034200 Sobic009G034200 Sobic004G113800--Sobic009G034200 Sobic004G241500 Sobic004G241500 Sobic004G113800--Sobic004G241500 Sobic004G174400 Sobic004G174400 Sobic004G113800--Sobic004G174400 Sobic003G324000 Sobic003G324000 Sobic004G113800--Sobic003G324000 Sobic001G484800--Sobic006G173000 Sobic001G207700 Sobic001G207700 Sobic001G484800--Sobic001G207700 Sobic001G484800--Sobic006G225200 Sobic001G484800--Sobic004G065650 Sobic001G484800--Sobic001G118100 Sobic004G208400 Sobic004G208400 Sobic001G484800--Sobic004G208400 Sobic001G484800--Sobic002G291700 Sobic001G484800--Sobic003G009700 Sobic008G013600 Sobic008G013600 Sobic001G484800--Sobic008G013600 Sobic002G291700--Sobic004G208400 Sobic002G291700--Sobic006G173000 Sobic004G188400 Sobic004G188400 Sobic002G291700--Sobic004G188400 Sobic002G291700--Sobic004G065650 Sobic002G291700--Sobic002G203200 Sobic006G137400 Sobic006G137400 Sobic002G291700--Sobic006G137400 Sobic002G291700--Sobic001G118100 Sobic002G291700--Sobic006G225200 Sobic005G110472 Sobic005G110472 Sobic002G291700--Sobic005G110472 Sobic007G052900--Sobic010G056200 Sobic007G052900--Sobic004G113800 Sobic002G209600 Sobic002G209600 Sobic007G052900--Sobic002G209600 Sobic010G005600 Sobic010G005600 Sobic007G052900--Sobic010G005600 Sobic004G083700 Sobic004G083700 Sobic007G052900--Sobic004G083700 Sobic007G054000 Sobic007G054000 Sobic007G052900--Sobic007G054000 Sobic010G280100 Sobic010G280100 Sobic007G052900--Sobic010G280100 Sobic007G052900--Sobic006G180432 Sobic009G065100 Sobic009G065100 Sobic007G052900--Sobic009G065100 Sobic004G065650--Sobic004G188400 Sobic004G065650--Sobic005G110472 Sobic004G065650--Sobic007G037900 Sobic006G088580 Sobic006G088580 Sobic004G065650--Sobic006G088580 Sobic004G065650--Sobic009G140500 Sobic004G065650--Sobic008G013600 Sobic010G124001 Sobic010G124001 Sobic004G065650--Sobic010G124001 Sobic004G065650--Sobic006G137400 Sobic004G065650--Sobic001G067850
Octagon: transcription factors


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