Gene annotation
Transcriptome id Sobic.006G225200.2
Synonym Sb06g029420, CYCP2, 1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cyclin, putative, expressed
UniProt A0A1Z5RF62
Pfam PF08613
Panther DB PTHR15615
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0000079; regulation of cyclin-dependent protein serine/threonine kinase activity


Orthologs (automatic annotation)
TAIR AT3G21870 : cyclin p2;1
RAP-DB (Rice) LOC_Os04g53680.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a057086
Brachypodium KQJ84772
Barley HORVU2Hr1G107830.2 , HORVU2Hr1G107830.1
Wheat TraesCS2A02G479100 , TraesCS2D02G478400 , TraesCS2B02G503500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G118100 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
2 Sobic.003G009700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.001G484800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@acetyltransferase, GNAT family, putative, expressed -
4 Sobic.006G173000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
5 Sobic.002G385700 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
6 Sobic.002G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.003G004200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed -
8 Sobic.001G233400 Citrate transporter protein, putative, expressed -
9 Sobic.007G173200 IDD5(PubMedID : 24676859)@ZOS8-12 - C2H2 zinc finger protein, expressed -
10 Sobic.001G207700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G191100 expressed protein -
12 Sobic.008G013600 - -
13 Sobic.002G358500 - -
14 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
15 Sobic.004G208400 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
16 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
17 Sobic.009G249600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcriptional regulator, putative, expressed K07735: putative transcriptional regulator
18 Sobic.005G036600 calmodulin-binding protein, putative, expressed -
19 Sobic.004G299000 expressed protein -
20 Sobic.007G113800 early-responsive to dehydration protein-related, putative, expressed -


Gene co-expression network
sample Sobic006G225200 Sobic006G225200 Sobic001G118100 Sobic001G118100 Sobic006G225200--Sobic001G118100 Sobic003G009700 Sobic003G009700 Sobic006G225200--Sobic003G009700 Sobic001G484800 Sobic001G484800 Sobic006G225200--Sobic001G484800 Sobic006G173000 Sobic006G173000 Sobic006G225200--Sobic006G173000 Sobic002G385700 Sobic002G385700 Sobic006G225200--Sobic002G385700 Sobic002G291700 Sobic002G291700 Sobic006G225200--Sobic002G291700 Sobic003G004200 Sobic003G004200 Sobic006G225200--Sobic003G004200 Sobic001G233400 Sobic001G233400 Sobic006G225200--Sobic001G233400 Sobic007G173200 Sobic007G173200 Sobic006G225200--Sobic007G173200 Sobic004G001300 Sobic004G001300 Sobic001G118100--Sobic004G001300 Sobic001G118100--Sobic006G225200 Sobic005G036600 Sobic005G036600 Sobic001G118100--Sobic005G036600 Sobic009G140500 Sobic009G140500 Sobic001G118100--Sobic009G140500 Sobic004G113800 Sobic004G113800 Sobic001G118100--Sobic004G113800 Sobic001G118100--Sobic001G484800 Sobic001G118100--Sobic002G291700 Sobic007G052900 Sobic007G052900 Sobic001G118100--Sobic007G052900 Sobic004G065650 Sobic004G065650 Sobic001G118100--Sobic004G065650 Sobic003G009700--Sobic006G225200 Sobic003G009700--Sobic003G004200 Sobic009G249600 Sobic009G249600 Sobic003G009700--Sobic009G249600 Sobic002G273300 Sobic002G273300 Sobic003G009700--Sobic002G273300 Sobic004G327700 Sobic004G327700 Sobic003G009700--Sobic004G327700 Sobic005G045000 Sobic005G045000 Sobic003G009700--Sobic005G045000 Sobic003G009700--Sobic001G484800 Sobic001G239500 Sobic001G239500 Sobic003G009700--Sobic001G239500 Sobic001G207700 Sobic001G207700 Sobic003G009700--Sobic001G207700 Sobic001G484800--Sobic006G173000 Sobic001G484800--Sobic001G207700 Sobic001G484800--Sobic006G225200 Sobic001G484800--Sobic004G065650 Sobic001G484800--Sobic001G118100 Sobic004G208400 Sobic004G208400 Sobic001G484800--Sobic004G208400 Sobic001G484800--Sobic002G291700 Sobic001G484800--Sobic003G009700 Sobic008G013600 Sobic008G013600 Sobic001G484800--Sobic008G013600 Sobic006G173000--Sobic004G208400 Sobic006G173000--Sobic002G291700 Sobic006G173000--Sobic001G484800 Sobic006G173000--Sobic004G065650 Sobic007G037100 Sobic007G037100 Sobic006G173000--Sobic007G037100 Sobic005G110472 Sobic005G110472 Sobic006G173000--Sobic005G110472 Sobic004G188400 Sobic004G188400 Sobic006G173000--Sobic004G188400 Sobic006G173000--Sobic006G225200 Sobic001G532000 Sobic001G532000 Sobic006G173000--Sobic001G532000 Sobic002G385700--Sobic001G233400 Sobic001G536800 Sobic001G536800 Sobic002G385700--Sobic001G536800 Sobic003G137100 Sobic003G137100 Sobic002G385700--Sobic003G137100 Sobic001G069000 Sobic001G069000 Sobic002G385700--Sobic001G069000 Sobic002G385700--Sobic006G225200 Sobic006G103400 Sobic006G103400 Sobic002G385700--Sobic006G103400 Sobic010G096300 Sobic010G096300 Sobic002G385700--Sobic010G096300 Sobic003G003600 Sobic003G003600 Sobic002G385700--Sobic003G003600 Sobic002G385700--Sobic004G327700 Sobic002G291700--Sobic004G208400 Sobic002G291700--Sobic006G173000 Sobic002G291700--Sobic004G188400 Sobic002G291700--Sobic004G065650 Sobic002G203200 Sobic002G203200 Sobic002G291700--Sobic002G203200 Sobic006G137400 Sobic006G137400 Sobic002G291700--Sobic006G137400 Sobic002G291700--Sobic001G118100 Sobic002G291700--Sobic006G225200 Sobic002G291700--Sobic005G110472 Sobic001G468700 Sobic001G468700 Sobic003G004200--Sobic001G468700 Sobic003G004200--Sobic003G009700 Sobic004G028500 Sobic004G028500 Sobic003G004200--Sobic004G028500 Sobic001G065600 Sobic001G065600 Sobic003G004200--Sobic001G065600 Sobic004G356400 Sobic004G356400 Sobic003G004200--Sobic004G356400 Sobic003G313300 Sobic003G313300 Sobic003G004200--Sobic003G313300 Sobic003G004200--Sobic005G045000 Sobic005G206300 Sobic005G206300 Sobic003G004200--Sobic005G206300 Sobic001G017300 Sobic001G017300 Sobic003G004200--Sobic001G017300 Sobic004G023200 Sobic004G023200 Sobic001G233400--Sobic004G023200 Sobic001G233400--Sobic006G103400 Sobic001G233400--Sobic001G536800 Sobic001G233400--Sobic003G137100 Sobic001G233400--Sobic002G385700 Sobic009G196800 Sobic009G196800 Sobic001G233400--Sobic009G196800 Sobic001G233400--Sobic001G069000 Sobic001G233400--Sobic010G096300 Sobic006G060200 Sobic006G060200 Sobic001G233400--Sobic006G060200 Sobic009G191100 Sobic009G191100 Sobic007G173200--Sobic009G191100 Sobic007G173200--Sobic001G118100 Sobic007G173200--Sobic001G532000 Sobic007G173200--Sobic006G173000 Sobic007G173200--Sobic006G225200 Sobic007G113800 Sobic007G113800 Sobic007G173200--Sobic007G113800 Sobic007G173200--Sobic009G140500 Sobic002G401100 Sobic002G401100 Sobic007G173200--Sobic002G401100 Sobic007G173200--Sobic004G113800
Octagon: transcription factors


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