Gene annotation
Transcriptome id Sobic.009G249600.1,Sobic.009G249600.2
Synonym Sb09g030010
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transcriptional regulator, putative, expressed
UniProt A0A1B6PA88 , A0A1B6PB42
Pfam PF02622
Panther DB PTHR31984 PTHR31984:SF3
NCBI CDD -
KEGG Orthology K07735; putative transcriptional regulator
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G29240 : Protein of unknown function (DUF179)
RAP-DB (Rice) LOC_Os10g18370.1 : transcriptional regulator, putative, expressed
MaizeGDB (Corn) Zm00025a044792 , Zm00025a006430
Brachypodium -
Barley -
Wheat TraesCS7D02G124600 , TraesCS7A02G126700 , TraesCS7B02G026100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G273300 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
2 Sobic.004G351700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ZOS2-19 - C2H2 zinc finger protein, expressed -
3 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
4 Sobic.004G343500 OsCttP2 - Putative C-terminal processing peptidase homologue, expressed -
5 Sobic.003G009700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.001G239500 starch synthase, putative, expressed K00703: starch synthase
7 Sobic.001G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-AMP-activated protein kinase-related, putative, expressed -
8 Sobic.003G004200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed -
9 Sobic.009G054900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@relA-SpoT like protein RSH4, putative, expressed -
10 Sobic.004G032400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-aspartate oxidase 1, putative, expressed K00278: L-aspartate oxidase
11 Sobic.001G111700 alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
13 Sobic.004G327700 tetratricopeptide repeat domain containing protein, putative, expressed K03255: TIF31, protein TIF31
14 Sobic.009G104800 AMP deaminase, putative, expressed K01490: AMP deaminase
15 Sobic.008G104601 - -
16 Sobic.005G231500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA-type ATPase family protein, putative, expressed -
17 Sobic.007G142200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
18 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G389700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.006G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cyclin, putative, expressed -


Gene co-expression network
sample Sobic009G249600 Sobic009G249600 Sobic002G273300 Sobic002G273300 Sobic009G249600--Sobic002G273300 Sobic004G351700 Sobic004G351700 Sobic009G249600--Sobic004G351700 Sobic006G244000 Sobic006G244000 Sobic009G249600--Sobic006G244000 Sobic004G343500 Sobic004G343500 Sobic009G249600--Sobic004G343500 Sobic003G009700 Sobic003G009700 Sobic009G249600--Sobic003G009700 Sobic001G239500 Sobic001G239500 Sobic009G249600--Sobic001G239500 Sobic001G134100 Sobic001G134100 Sobic009G249600--Sobic001G134100 Sobic003G004200 Sobic003G004200 Sobic009G249600--Sobic003G004200 Sobic009G054900 Sobic009G054900 Sobic009G249600--Sobic009G054900 Sobic002G273300--Sobic004G343500 Sobic007G047400 Sobic007G047400 Sobic002G273300--Sobic007G047400 Sobic002G273300--Sobic009G249600 Sobic002G273300--Sobic001G239500 Sobic001G305600 Sobic001G305600 Sobic002G273300--Sobic001G305600 Sobic002G273300--Sobic003G004200 Sobic002G273300--Sobic004G351700 Sobic002G273300--Sobic009G054900 Sobic002G273300--Sobic003G009700 Sobic001G111700 Sobic001G111700 Sobic004G351700--Sobic001G111700 Sobic004G351700--Sobic009G249600 Sobic004G351700--Sobic004G343500 Sobic004G351700--Sobic002G273300 Sobic004G351700--Sobic009G054900 Sobic003G134400 Sobic003G134400 Sobic004G351700--Sobic003G134400 Sobic004G351700--Sobic006G244000 Sobic007G142200 Sobic007G142200 Sobic004G351700--Sobic007G142200 Sobic010G251700 Sobic010G251700 Sobic004G351700--Sobic010G251700 Sobic001G329400 Sobic001G329400 Sobic006G244000--Sobic001G329400 Sobic009G048900 Sobic009G048900 Sobic006G244000--Sobic009G048900 Sobic003G256700 Sobic003G256700 Sobic006G244000--Sobic003G256700 Sobic009G104800 Sobic009G104800 Sobic006G244000--Sobic009G104800 Sobic008G104601 Sobic008G104601 Sobic006G244000--Sobic008G104601 Sobic004G125700 Sobic004G125700 Sobic006G244000--Sobic004G125700 Sobic003G431900 Sobic003G431900 Sobic006G244000--Sobic003G431900 Sobic001G406000 Sobic001G406000 Sobic006G244000--Sobic001G406000 Sobic006G244000--Sobic001G134100 Sobic004G343500--Sobic002G273300 Sobic004G343500--Sobic009G054900 Sobic004G343500--Sobic001G239500 Sobic004G343500--Sobic009G249600 Sobic004G343500--Sobic001G134100 Sobic004G343500--Sobic004G351700 Sobic004G343500--Sobic007G047400 Sobic004G343500--Sobic006G244000 Sobic007G140800 Sobic007G140800 Sobic004G343500--Sobic007G140800 Sobic006G225200 Sobic006G225200 Sobic003G009700--Sobic006G225200 Sobic003G009700--Sobic003G004200 Sobic003G009700--Sobic009G249600 Sobic003G009700--Sobic002G273300 Sobic004G327700 Sobic004G327700 Sobic003G009700--Sobic004G327700 Sobic005G045000 Sobic005G045000 Sobic003G009700--Sobic005G045000 Sobic001G484800 Sobic001G484800 Sobic003G009700--Sobic001G484800 Sobic003G009700--Sobic001G239500 Sobic001G207700 Sobic001G207700 Sobic003G009700--Sobic001G207700 Sobic001G239500--Sobic004G343500 Sobic001G239500--Sobic002G273300 Sobic001G514800 Sobic001G514800 Sobic001G239500--Sobic001G514800 Sobic008G168300 Sobic008G168300 Sobic001G239500--Sobic008G168300 Sobic001G239500--Sobic003G004200 Sobic001G239500--Sobic009G054900 Sobic001G239500--Sobic001G207700 Sobic001G239500--Sobic009G249600 Sobic001G239500--Sobic007G047400 Sobic003G367500 Sobic003G367500 Sobic001G134100--Sobic003G367500 Sobic001G134100--Sobic001G329400 Sobic005G231500 Sobic005G231500 Sobic001G134100--Sobic005G231500 Sobic007G105500 Sobic007G105500 Sobic001G134100--Sobic007G105500 Sobic004G154200 Sobic004G154200 Sobic001G134100--Sobic004G154200 Sobic010G085100 Sobic010G085100 Sobic001G134100--Sobic010G085100 Sobic008G117000 Sobic008G117000 Sobic001G134100--Sobic008G117000 Sobic010G039500 Sobic010G039500 Sobic001G134100--Sobic010G039500 Sobic004G215800 Sobic004G215800 Sobic001G134100--Sobic004G215800 Sobic001G468700 Sobic001G468700 Sobic003G004200--Sobic001G468700 Sobic003G004200--Sobic003G009700 Sobic004G028500 Sobic004G028500 Sobic003G004200--Sobic004G028500 Sobic001G065600 Sobic001G065600 Sobic003G004200--Sobic001G065600 Sobic004G356400 Sobic004G356400 Sobic003G004200--Sobic004G356400 Sobic003G313300 Sobic003G313300 Sobic003G004200--Sobic003G313300 Sobic003G004200--Sobic005G045000 Sobic005G206300 Sobic005G206300 Sobic003G004200--Sobic005G206300 Sobic001G017300 Sobic001G017300 Sobic003G004200--Sobic001G017300 Sobic009G054900--Sobic001G329400 Sobic009G054900--Sobic010G251700 Sobic009G054900--Sobic004G343500 Sobic009G054900--Sobic007G140800 Sobic001G178250 Sobic001G178250 Sobic009G054900--Sobic001G178250 Sobic009G054900--Sobic004G356400 Sobic006G130300 Sobic006G130300 Sobic009G054900--Sobic006G130300 Sobic009G054900--Sobic001G514800 Sobic006G093800 Sobic006G093800 Sobic009G054900--Sobic006G093800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.