Gene annotation
Transcriptome id Sobic.001G111700.1
Synonym Sb01g009950
Functional annotation alpha/beta-Hydrolases superfamily protein (PubMedID : 26465154)
alpha/beta-Hydrolases superfamily protein (PubMedID : 26465154)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5WMZ0
Pfam PF12695
Panther DB PTHR11614 PTHR11614:SF97
NCBI CDD KOG1455; Lysophospholipase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g51010.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016930 , Zm00025a007909
Brachypodium KQK13499
Barley HORVU4Hr1G008550.12 , HORVU4Hr1G008550.2 , HORVU4Hr1G008550.3
Wheat TraesCS4A02G263200 , TraesCS4B02G051600 , TraesCS4D02G051900 , TraesCS4D02G051900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
2 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
3 Sobic.007G189700 - -
4 Sobic.004G351700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ZOS2-19 - C2H2 zinc finger protein, expressed -
5 Sobic.003G199800 expressed protein -
6 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
7 Sobic.003G036100 - -
8 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.008G108400 expressed protein -
10 Sobic.005G202600 tropinone reductase 2, putative, expressed -
11 Sobic.003G234400 CA(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
12 Sobic.003G303700 Protein thylakoid membrane phosphoprotein 14 kda (Os)(PubMedID : 27208977)@expressed protein -
13 Sobic.002G421300 stress responsive protein, putative, expressed -
14 Sobic.009G054900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@relA-SpoT like protein RSH4, putative, expressed -
15 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
16 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
17 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
18 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
19 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
20 Sobic.004G035700 - -


Gene co-expression network
sample Sobic001G111700 Sobic001G111700 Sobic004G026300 Sobic004G026300 Sobic001G111700--Sobic004G026300 Sobic010G183100 Sobic010G183100 Sobic001G111700--Sobic010G183100 Sobic007G189700 Sobic007G189700 Sobic001G111700--Sobic007G189700 Sobic004G351700 Sobic004G351700 Sobic001G111700--Sobic004G351700 Sobic003G199800 Sobic003G199800 Sobic001G111700--Sobic003G199800 Sobic009G222200 Sobic009G222200 Sobic001G111700--Sobic009G222200 Sobic003G036100 Sobic003G036100 Sobic001G111700--Sobic003G036100 Sobic004G353700 Sobic004G353700 Sobic001G111700--Sobic004G353700 Sobic008G108400 Sobic008G108400 Sobic001G111700--Sobic008G108400 Sobic003G131000 Sobic003G131000 Sobic004G026300--Sobic003G131000 Sobic010G276400 Sobic010G276400 Sobic004G026300--Sobic010G276400 Sobic004G026300--Sobic003G199800 Sobic003G234400 Sobic003G234400 Sobic004G026300--Sobic003G234400 Sobic010G038500 Sobic010G038500 Sobic004G026300--Sobic010G038500 Sobic004G026300--Sobic001G111700 Sobic001G068400 Sobic001G068400 Sobic004G026300--Sobic001G068400 Sobic002G040100 Sobic002G040100 Sobic004G026300--Sobic002G040100 Sobic003G069100 Sobic003G069100 Sobic004G026300--Sobic003G069100 Sobic004G035700 Sobic004G035700 Sobic010G183100--Sobic004G035700 Sobic010G183100--Sobic007G189700 Sobic008G081200 Sobic008G081200 Sobic010G183100--Sobic008G081200 Sobic010G183100--Sobic001G068400 Sobic010G183100--Sobic003G199800 Sobic010G183100--Sobic010G038500 Sobic010G183100--Sobic002G040100 Sobic009G254600 Sobic009G254600 Sobic010G183100--Sobic009G254600 Sobic010G183100--Sobic009G222200 Sobic007G189700--Sobic010G183100 Sobic007G189700--Sobic004G035700 Sobic010G030800 Sobic010G030800 Sobic007G189700--Sobic010G030800 Sobic007G189700--Sobic003G199800 Sobic007G189700--Sobic008G081200 Sobic007G189700--Sobic009G222200 Sobic007G189700--Sobic009G254600 Sobic007G189700--Sobic002G040100 Sobic001G406000 Sobic001G406000 Sobic007G189700--Sobic001G406000 Sobic004G351700--Sobic001G111700 Sobic009G249600 Sobic009G249600 Sobic004G351700--Sobic009G249600 Sobic004G343500 Sobic004G343500 Sobic004G351700--Sobic004G343500 Sobic002G273300 Sobic002G273300 Sobic004G351700--Sobic002G273300 Sobic009G054900 Sobic009G054900 Sobic004G351700--Sobic009G054900 Sobic003G134400 Sobic003G134400 Sobic004G351700--Sobic003G134400 Sobic006G244000 Sobic006G244000 Sobic004G351700--Sobic006G244000 Sobic007G142200 Sobic007G142200 Sobic004G351700--Sobic007G142200 Sobic010G251700 Sobic010G251700 Sobic004G351700--Sobic010G251700 Sobic003G199800--Sobic002G040100 Sobic003G199800--Sobic010G276400 Sobic002G000500 Sobic002G000500 Sobic003G199800--Sobic002G000500 Sobic003G199800--Sobic010G183100 Sobic004G035500 Sobic004G035500 Sobic003G199800--Sobic004G035500 Sobic008G038300 Sobic008G038300 Sobic003G199800--Sobic008G038300 Sobic010G109500 Sobic010G109500 Sobic003G199800--Sobic010G109500 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300 Sobic009G222200--Sobic010G183100 Sobic003G237600 Sobic003G237600 Sobic009G222200--Sobic003G237600 Sobic001G189100 Sobic001G189100 Sobic009G222200--Sobic001G189100 Sobic009G222200--Sobic010G030800 Sobic001G355600 Sobic001G355600 Sobic009G222200--Sobic001G355600 Sobic009G222200--Sobic007G189700 Sobic009G222200--Sobic003G036100 Sobic009G222200--Sobic004G035700 Sobic003G036100--Sobic001G189100 Sobic003G036100--Sobic003G237600 Sobic003G036100--Sobic004G353700 Sobic003G036100--Sobic007G189700 Sobic003G036100--Sobic010G030800 Sobic003G036100--Sobic009G222200 Sobic003G036100--Sobic009G254600 Sobic003G036100--Sobic001G111700 Sobic004G353700--Sobic003G234400 Sobic004G353700--Sobic003G036100 Sobic004G353700--Sobic007G189700 Sobic004G353700--Sobic010G030800 Sobic004G353700--Sobic001G406000 Sobic004G353700--Sobic009G222200 Sobic002G214300 Sobic002G214300 Sobic004G353700--Sobic002G214300 Sobic005G202600 Sobic005G202600 Sobic004G353700--Sobic005G202600 Sobic004G353700--Sobic001G111700 Sobic010G153900 Sobic010G153900 Sobic008G108400--Sobic010G153900 Sobic002G421300 Sobic002G421300 Sobic008G108400--Sobic002G421300 Sobic008G108400--Sobic001G111700 Sobic009G113800 Sobic009G113800 Sobic008G108400--Sobic009G113800 Sobic003G241900 Sobic003G241900 Sobic008G108400--Sobic003G241900 Sobic008G108400--Sobic004G026300 Sobic008G108400--Sobic009G054900 Sobic007G140800 Sobic007G140800 Sobic008G108400--Sobic007G140800 Sobic008G115900 Sobic008G115900 Sobic008G108400--Sobic008G115900
Octagon: transcription factors


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