Gene annotation
Transcriptome id Sobic.008G081200.1
Synonym Sb08g007700
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peptide transporter PTR3-A, putative, expressed
UniProt C5YTX3
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF21
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G59740 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os12g12934.1 : peptide transporter PTR3-A, putative, expressed
MaizeGDB (Corn) Zm00025a025017
Brachypodium KQJ91792
Barley HORVU5Hr1G095020.11 , HORVU5Hr1G095020.10 , HORVU5Hr1G095020.9 , HORVU5Hr1G095020.8 , HORVU5Hr1G095020.3 , HORVU5Hr1G095020.1 , HORVU5Hr1G095020.5 , HORVU5Hr1G095020.4
Wheat TraesCS5B02G393100 , TraesCS5A02G388000 , TraesCS5D02G398000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
3 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.001G068400 - -
5 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
6 Sobic.004G035700 - -
7 Sobic.003G199800 expressed protein -
8 Sobic.007G189700 - -
9 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
10 Sobic.002G000500 isoflavone reductase, putative, expressed -
11 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.003G231800 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
13 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
14 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
15 Sobic.003G237600 expressed protein -
16 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
17 Sobic.001G361700 expressed protein -
18 Sobic.002G213000 - -
19 Sobic.010G183032 - -
20 Sobic.003G131000 expressed protein -


Gene co-expression network
sample Sobic008G081200 Sobic008G081200 Sobic010G038500 Sobic010G038500 Sobic008G081200--Sobic010G038500 Sobic010G183100 Sobic010G183100 Sobic008G081200--Sobic010G183100 Sobic009G254600 Sobic009G254600 Sobic008G081200--Sobic009G254600 Sobic001G068400 Sobic001G068400 Sobic008G081200--Sobic001G068400 Sobic002G040100 Sobic002G040100 Sobic008G081200--Sobic002G040100 Sobic004G035700 Sobic004G035700 Sobic008G081200--Sobic004G035700 Sobic003G199800 Sobic003G199800 Sobic008G081200--Sobic003G199800 Sobic007G189700 Sobic007G189700 Sobic008G081200--Sobic007G189700 Sobic010G276400 Sobic010G276400 Sobic008G081200--Sobic010G276400 Sobic010G038500--Sobic008G081200 Sobic010G038500--Sobic009G254600 Sobic010G038500--Sobic001G068400 Sobic010G038500--Sobic002G040100 Sobic010G038500--Sobic004G035700 Sobic010G038500--Sobic010G183100 Sobic002G233300 Sobic002G233300 Sobic010G038500--Sobic002G233300 Sobic010G038500--Sobic003G199800 Sobic003G131000 Sobic003G131000 Sobic010G038500--Sobic003G131000 Sobic010G183100--Sobic004G035700 Sobic010G183100--Sobic007G189700 Sobic010G183100--Sobic008G081200 Sobic010G183100--Sobic001G068400 Sobic010G183100--Sobic003G199800 Sobic010G183100--Sobic010G038500 Sobic010G183100--Sobic002G040100 Sobic010G183100--Sobic009G254600 Sobic009G222200 Sobic009G222200 Sobic010G183100--Sobic009G222200 Sobic009G254600--Sobic010G038500 Sobic009G254600--Sobic008G081200 Sobic001G189100 Sobic001G189100 Sobic009G254600--Sobic001G189100 Sobic009G254600--Sobic004G035700 Sobic003G237600 Sobic003G237600 Sobic009G254600--Sobic003G237600 Sobic009G254600--Sobic010G183100 Sobic009G254600--Sobic001G068400 Sobic009G254600--Sobic007G189700 Sobic001G068400--Sobic002G040100 Sobic001G068400--Sobic010G038500 Sobic001G068400--Sobic010G183100 Sobic001G068400--Sobic004G035700 Sobic001G068400--Sobic008G081200 Sobic001G068400--Sobic010G276400 Sobic002G000500 Sobic002G000500 Sobic001G068400--Sobic002G000500 Sobic001G068400--Sobic003G199800 Sobic010G183032 Sobic010G183032 Sobic001G068400--Sobic010G183032 Sobic002G040100--Sobic002G000500 Sobic008G038300 Sobic008G038300 Sobic002G040100--Sobic008G038300 Sobic002G040100--Sobic003G199800 Sobic002G040100--Sobic010G276400 Sobic002G040100--Sobic001G068400 Sobic010G109500 Sobic010G109500 Sobic002G040100--Sobic010G109500 Sobic002G040100--Sobic010G038500 Sobic002G040100--Sobic010G183032 Sobic003G209800 Sobic003G209800 Sobic002G040100--Sobic003G209800 Sobic004G035700--Sobic010G183100 Sobic004G035700--Sobic007G189700 Sobic004G035700--Sobic001G068400 Sobic004G035700--Sobic010G183032 Sobic010G108401 Sobic010G108401 Sobic004G035700--Sobic010G108401 Sobic004G035700--Sobic009G254600 Sobic004G035700--Sobic010G038500 Sobic004G035700--Sobic002G040100 Sobic001G297400 Sobic001G297400 Sobic004G035700--Sobic001G297400 Sobic003G199800--Sobic002G040100 Sobic003G199800--Sobic010G276400 Sobic003G199800--Sobic002G000500 Sobic003G199800--Sobic010G183100 Sobic004G035500 Sobic004G035500 Sobic003G199800--Sobic004G035500 Sobic003G199800--Sobic008G038300 Sobic003G199800--Sobic010G109500 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300 Sobic007G189700--Sobic010G183100 Sobic007G189700--Sobic004G035700 Sobic010G030800 Sobic010G030800 Sobic007G189700--Sobic010G030800 Sobic007G189700--Sobic003G199800 Sobic007G189700--Sobic008G081200 Sobic007G189700--Sobic009G222200 Sobic007G189700--Sobic009G254600 Sobic007G189700--Sobic002G040100 Sobic001G406000 Sobic001G406000 Sobic007G189700--Sobic001G406000 Sobic010G276400--Sobic010G109500 Sobic010G276400--Sobic003G199800 Sobic010G276400--Sobic002G000500 Sobic010G276400--Sobic002G040100 Sobic006G234100 Sobic006G234100 Sobic010G276400--Sobic006G234100 Sobic010G276400--Sobic001G068400 Sobic010G276400--Sobic008G038300 Sobic007G171600 Sobic007G171600 Sobic010G276400--Sobic007G171600 Sobic010G276400--Sobic003G209800
Octagon: transcription factors


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