Gene annotation
Transcriptome id Sobic.003G199800.5,Sobic.003G199800.7,Sobic.003G199800.4,Sobic.003G199800.3,Sobic.003G199800.8,Sobic.003G199800.9,Sobic.003G199800.6
Synonym Sb03g026210
Functional annotation expressed protein
UniProt A0A1B6Q4D1
Pfam PF06549
Panther DB PTHR31425 PTHR31425:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74730 : Protein of unknown function (DUF1118)
RAP-DB (Rice) LOC_Os01g40310.1 : expressed protein
MaizeGDB (Corn) Zm00025a028513
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G199800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
2 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
3 Sobic.002G000500 isoflavone reductase, putative, expressed -
4 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
5 Sobic.004G035500 -(PubMedID : 26976818)@Involved in photorespiratory pathway(PubMedID : 12887583)@dicarboxylate transporter 3(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
6 Sobic.008G038300 uncharacterized protein ycf53, putative, expressed -
7 Sobic.010G109500 expressed protein -
8 Sobic.007G189700 - -
9 Sobic.009G191300 photosystem II reaction center W protein, chloroplast precursor, putative, expressed K02721: photosystem II PsbW protein
10 Sobic.001G068400 - -
11 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
12 Sobic.007G171600 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
13 Sobic.003G209800 Chorophyll a/b binding protein 2(PubMedID : 26186930)@Protein chlorophyll a-b binding protein 2 (Os)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
14 Sobic.001G520800 expressed protein -
15 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
16 Sobic.002G098800 peroxiredoxin, putative, expressed -
17 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
18 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.004G035700 - -
20 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic003G199800 Sobic003G199800 Sobic002G040100 Sobic002G040100 Sobic003G199800--Sobic002G040100 Sobic010G276400 Sobic010G276400 Sobic003G199800--Sobic010G276400 Sobic002G000500 Sobic002G000500 Sobic003G199800--Sobic002G000500 Sobic010G183100 Sobic010G183100 Sobic003G199800--Sobic010G183100 Sobic004G035500 Sobic004G035500 Sobic003G199800--Sobic004G035500 Sobic008G038300 Sobic008G038300 Sobic003G199800--Sobic008G038300 Sobic010G109500 Sobic010G109500 Sobic003G199800--Sobic010G109500 Sobic007G189700 Sobic007G189700 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300 Sobic002G040100--Sobic002G000500 Sobic002G040100--Sobic008G038300 Sobic002G040100--Sobic003G199800 Sobic002G040100--Sobic010G276400 Sobic001G068400 Sobic001G068400 Sobic002G040100--Sobic001G068400 Sobic002G040100--Sobic010G109500 Sobic010G038500 Sobic010G038500 Sobic002G040100--Sobic010G038500 Sobic010G183032 Sobic010G183032 Sobic002G040100--Sobic010G183032 Sobic003G209800 Sobic003G209800 Sobic002G040100--Sobic003G209800 Sobic010G276400--Sobic010G109500 Sobic010G276400--Sobic003G199800 Sobic010G276400--Sobic002G000500 Sobic010G276400--Sobic002G040100 Sobic006G234100 Sobic006G234100 Sobic010G276400--Sobic006G234100 Sobic010G276400--Sobic001G068400 Sobic010G276400--Sobic008G038300 Sobic007G171600 Sobic007G171600 Sobic010G276400--Sobic007G171600 Sobic010G276400--Sobic003G209800 Sobic002G000500--Sobic002G040100 Sobic006G011100 Sobic006G011100 Sobic002G000500--Sobic006G011100 Sobic002G000500--Sobic010G109500 Sobic002G000500--Sobic010G276400 Sobic002G000500--Sobic003G199800 Sobic002G000500--Sobic008G038300 Sobic002G000500--Sobic007G171600 Sobic002G000500--Sobic003G209800 Sobic001G274600 Sobic001G274600 Sobic002G000500--Sobic001G274600 Sobic004G035700 Sobic004G035700 Sobic010G183100--Sobic004G035700 Sobic010G183100--Sobic007G189700 Sobic008G081200 Sobic008G081200 Sobic010G183100--Sobic008G081200 Sobic010G183100--Sobic001G068400 Sobic010G183100--Sobic003G199800 Sobic010G183100--Sobic010G038500 Sobic010G183100--Sobic002G040100 Sobic009G254600 Sobic009G254600 Sobic010G183100--Sobic009G254600 Sobic009G222200 Sobic009G222200 Sobic010G183100--Sobic009G222200 Sobic003G359100 Sobic003G359100 Sobic004G035500--Sobic003G359100 Sobic008G134800 Sobic008G134800 Sobic004G035500--Sobic008G134800 Sobic007G071500 Sobic007G071500 Sobic004G035500--Sobic007G071500 Sobic004G249800 Sobic004G249800 Sobic004G035500--Sobic004G249800 Sobic008G066100 Sobic008G066100 Sobic004G035500--Sobic008G066100 Sobic008G021300 Sobic008G021300 Sobic004G035500--Sobic008G021300 Sobic007G207800 Sobic007G207800 Sobic004G035500--Sobic007G207800 Sobic004G272100 Sobic004G272100 Sobic004G035500--Sobic004G272100 Sobic006G105900 Sobic006G105900 Sobic004G035500--Sobic006G105900 Sobic008G038300--Sobic002G040100 Sobic008G038300--Sobic001G274600 Sobic008G038300--Sobic010G183032 Sobic008G038300--Sobic003G209800 Sobic010G108401 Sobic010G108401 Sobic008G038300--Sobic010G108401 Sobic008G038300--Sobic002G000500 Sobic008G038300--Sobic009G191300 Sobic004G071800 Sobic004G071800 Sobic008G038300--Sobic004G071800 Sobic008G038300--Sobic003G199800 Sobic010G109500--Sobic006G234100 Sobic001G448400 Sobic001G448400 Sobic010G109500--Sobic001G448400 Sobic010G109500--Sobic006G011100 Sobic010G109500--Sobic003G209800 Sobic010G109500--Sobic010G276400 Sobic002G339200 Sobic002G339200 Sobic010G109500--Sobic002G339200 Sobic010G109500--Sobic002G000500 Sobic003G052500 Sobic003G052500 Sobic010G109500--Sobic003G052500 Sobic004G343300 Sobic004G343300 Sobic010G109500--Sobic004G343300 Sobic007G189700--Sobic010G183100 Sobic007G189700--Sobic004G035700 Sobic010G030800 Sobic010G030800 Sobic007G189700--Sobic010G030800 Sobic007G189700--Sobic003G199800 Sobic007G189700--Sobic008G081200 Sobic007G189700--Sobic009G222200 Sobic007G189700--Sobic009G254600 Sobic007G189700--Sobic002G040100 Sobic001G406000 Sobic001G406000 Sobic007G189700--Sobic001G406000 Sobic009G191300--Sobic008G038300 Sobic009G191300--Sobic003G209800 Sobic009G191300--Sobic002G040100 Sobic009G191300--Sobic003G052500 Sobic009G191300--Sobic004G035500 Sobic009G191300--Sobic003G359100 Sobic009G191300--Sobic003G199800 Sobic009G191300--Sobic010G109500 Sobic001G338700 Sobic001G338700 Sobic009G191300--Sobic001G338700
Octagon: transcription factors


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