Gene annotation
Transcriptome id Sobic.001G520800.2,Sobic.001G520800.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QQR9
Pfam -
Panther DB PTHR11014 PTHR11014:SF83
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38225 : -
RAP-DB (Rice) LOC_Os03g03670.1 : expressed protein
MaizeGDB (Corn) Zm00025a000392
Brachypodium -
Barley -
Wheat TraesCS5A02G490100 , TraesCS4B02G321900
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G034300 expressed protein -
2 Sobic.005G039600 -(PubMedID : 26465154)@expressed protein -
3 Sobic.003G199800 expressed protein -
4 Sobic.008G104601 - -
5 Sobic.003G231800 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
6 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.009G244300 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
8 Sobic.007G189700 - -
9 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
10 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
11 Sobic.003G310400 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
12 Sobic.003G256700 expressed protein -
13 Sobic.009G191300 photosystem II reaction center W protein, chloroplast precursor, putative, expressed K02721: photosystem II PsbW protein
14 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
15 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
17 Sobic.006G051300 expressed protein -
18 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
19 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
20 Sobic.001G344600 late embryogenesis abundant protein, putative, expressed -


Gene co-expression network
sample Sobic001G520800 Sobic001G520800 Sobic007G034300 Sobic007G034300 Sobic001G520800--Sobic007G034300 Sobic005G039600 Sobic005G039600 Sobic001G520800--Sobic005G039600 Sobic003G199800 Sobic003G199800 Sobic001G520800--Sobic003G199800 Sobic008G104601 Sobic008G104601 Sobic001G520800--Sobic008G104601 Sobic003G231800 Sobic003G231800 Sobic001G520800--Sobic003G231800 Sobic002G233300 Sobic002G233300 Sobic001G520800--Sobic002G233300 Sobic009G244300 Sobic009G244300 Sobic001G520800--Sobic009G244300 Sobic007G189700 Sobic007G189700 Sobic001G520800--Sobic007G189700 Sobic003G431900 Sobic003G431900 Sobic001G520800--Sobic003G431900 Sobic007G034300--Sobic001G520800 Sobic005G165500 Sobic005G165500 Sobic007G034300--Sobic005G165500 Sobic007G034300--Sobic009G244300 Sobic008G053200 Sobic008G053200 Sobic007G034300--Sobic008G053200 Sobic004G283100 Sobic004G283100 Sobic007G034300--Sobic004G283100 Sobic007G034300--Sobic008G104601 Sobic007G034300--Sobic002G233300 Sobic007G034300--Sobic003G231800 Sobic004G305800 Sobic004G305800 Sobic007G034300--Sobic004G305800 Sobic005G039600--Sobic001G520800 Sobic005G039600--Sobic007G034300 Sobic005G039600--Sobic003G199800 Sobic003G310400 Sobic003G310400 Sobic005G039600--Sobic003G310400 Sobic005G039600--Sobic003G231800 Sobic005G039600--Sobic003G431900 Sobic005G039600--Sobic009G244300 Sobic004G035500 Sobic004G035500 Sobic005G039600--Sobic004G035500 Sobic005G030500 Sobic005G030500 Sobic005G039600--Sobic005G030500 Sobic002G040100 Sobic002G040100 Sobic003G199800--Sobic002G040100 Sobic010G276400 Sobic010G276400 Sobic003G199800--Sobic010G276400 Sobic002G000500 Sobic002G000500 Sobic003G199800--Sobic002G000500 Sobic010G183100 Sobic010G183100 Sobic003G199800--Sobic010G183100 Sobic003G199800--Sobic004G035500 Sobic008G038300 Sobic008G038300 Sobic003G199800--Sobic008G038300 Sobic010G109500 Sobic010G109500 Sobic003G199800--Sobic010G109500 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300 Sobic006G244000 Sobic006G244000 Sobic008G104601--Sobic006G244000 Sobic008G104601--Sobic007G034300 Sobic008G104601--Sobic001G520800 Sobic001G329400 Sobic001G329400 Sobic008G104601--Sobic001G329400 Sobic008G104601--Sobic003G431900 Sobic003G256700 Sobic003G256700 Sobic008G104601--Sobic003G256700 Sobic004G125700 Sobic004G125700 Sobic008G104601--Sobic004G125700 Sobic006G051300 Sobic006G051300 Sobic008G104601--Sobic006G051300 Sobic009G104800 Sobic009G104800 Sobic008G104601--Sobic009G104800 Sobic003G231800--Sobic009G244300 Sobic009G244600 Sobic009G244600 Sobic003G231800--Sobic009G244600 Sobic004G267000 Sobic004G267000 Sobic003G231800--Sobic004G267000 Sobic003G231800--Sobic010G183100 Sobic003G231800--Sobic007G034300 Sobic003G231800--Sobic001G520800 Sobic006G006700 Sobic006G006700 Sobic003G231800--Sobic006G006700 Sobic009G254600 Sobic009G254600 Sobic003G231800--Sobic009G254600 Sobic003G235500 Sobic003G235500 Sobic003G231800--Sobic003G235500 Sobic010G038500 Sobic010G038500 Sobic002G233300--Sobic010G038500 Sobic002G233300--Sobic003G199800 Sobic002G233300--Sobic002G040100 Sobic001G344600 Sobic001G344600 Sobic002G233300--Sobic001G344600 Sobic002G233300--Sobic009G191300 Sobic002G233300--Sobic007G034300 Sobic001G338700 Sobic001G338700 Sobic002G233300--Sobic001G338700 Sobic002G233300--Sobic001G520800 Sobic002G233300--Sobic008G038300 Sobic009G244300--Sobic003G231800 Sobic009G244300--Sobic004G267000 Sobic009G244300--Sobic009G244600 Sobic009G244300--Sobic007G034300 Sobic003G241900 Sobic003G241900 Sobic009G244300--Sobic003G241900 Sobic009G244300--Sobic001G520800 Sobic009G244300--Sobic004G305800 Sobic009G244300--Sobic008G104601 Sobic009G244300--Sobic003G199800 Sobic007G189700--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic007G189700--Sobic004G035700 Sobic010G030800 Sobic010G030800 Sobic007G189700--Sobic010G030800 Sobic007G189700--Sobic003G199800 Sobic008G081200 Sobic008G081200 Sobic007G189700--Sobic008G081200 Sobic009G222200 Sobic009G222200 Sobic007G189700--Sobic009G222200 Sobic007G189700--Sobic009G254600 Sobic007G189700--Sobic002G040100 Sobic001G406000 Sobic001G406000 Sobic007G189700--Sobic001G406000 Sobic003G431900--Sobic008G053200 Sobic003G234200 Sobic003G234200 Sobic003G431900--Sobic003G234200 Sobic003G431900--Sobic004G305800 Sobic003G431900--Sobic003G256700 Sobic001G519800 Sobic001G519800 Sobic003G431900--Sobic001G519800 Sobic003G431900--Sobic005G165500 Sobic002G324500 Sobic002G324500 Sobic003G431900--Sobic002G324500 Sobic004G308700 Sobic004G308700 Sobic003G431900--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431900--Sobic004G272100
Octagon: transcription factors


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