Gene annotation
Transcriptome id Sobic.009G244300.3,Sobic.009G244300.2
Synonym Sb09g029560, ATRL6, RSM3, RL6
Functional annotation down-regulated TF in developmental senescence (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt C5YWE6
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF177
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75250 : RAD-like 6
RAP-DB (Rice) LOC_Os05g50340.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a044693
Brachypodium -
Barley HORVU6Hr1G061660.1 , HORVU6Hr1G061660.2 , HORVU1Hr1G091540.1 , HORVU1Hr1G091540.2 , HORVU1Hr1G091540.3 , HORVU1Hr1G091530.4 , HORVU1Hr1G091530.1 , HORVU1Hr1G091530.3 , HORVU1Hr1G091530.2
Wheat TraesCS1B02G449400 , TraesCS1B02G449100 , TraesCS1B02G449300 , TraesCS1D02G427000 , TraesCS1D02G426700 , TraesCS1D02G426900
Populus -


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cDNA sequences
Sobic.009G244300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G231800 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
2 Sobic.004G267000 RAD-like 6(PubMedID : 26465154)@MYB family transcription factor, putative, expressed -
3 Sobic.009G244600 MYB family transcription factor, putative, expressed -
4 Sobic.007G034300 expressed protein -
5 Sobic.003G241900 expressed protein -
6 Sobic.001G520800 expressed protein -
7 Sobic.004G305800 expressed protein -
8 Sobic.008G104601 - -
9 Sobic.003G199800 expressed protein -
10 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.005G039600 -(PubMedID : 26465154)@expressed protein -
12 Sobic.007G004850 - -
13 Sobic.006G006700 - -
14 Sobic.005G165500 OsSub17 - Putative Subtilisin homologue, expressed -
15 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
16 Sobic.006G147300 -(PubMedID : 26465154)@expressed protein -
17 Sobic.001G076900 Uncharacterised protein family (UPF0497)(PubMedID : 26465154)@membrane associated DUF588 domain containing protein, putative, expressed -
18 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
19 Sobic.010G095000 kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
20 Sobic.002G421300 stress responsive protein, putative, expressed -


Gene co-expression network
sample Sobic009G244300 Sobic009G244300 Sobic003G231800 Sobic003G231800 Sobic009G244300--Sobic003G231800 Sobic004G267000 Sobic004G267000 Sobic009G244300--Sobic004G267000 Sobic009G244600 Sobic009G244600 Sobic009G244300--Sobic009G244600 Sobic007G034300 Sobic007G034300 Sobic009G244300--Sobic007G034300 Sobic003G241900 Sobic003G241900 Sobic009G244300--Sobic003G241900 Sobic001G520800 Sobic001G520800 Sobic009G244300--Sobic001G520800 Sobic004G305800 Sobic004G305800 Sobic009G244300--Sobic004G305800 Sobic008G104601 Sobic008G104601 Sobic009G244300--Sobic008G104601 Sobic003G199800 Sobic003G199800 Sobic009G244300--Sobic003G199800 Sobic003G231800--Sobic009G244300 Sobic003G231800--Sobic009G244600 Sobic003G231800--Sobic004G267000 Sobic010G183100 Sobic010G183100 Sobic003G231800--Sobic010G183100 Sobic003G231800--Sobic007G034300 Sobic003G231800--Sobic001G520800 Sobic006G006700 Sobic006G006700 Sobic003G231800--Sobic006G006700 Sobic009G254600 Sobic009G254600 Sobic003G231800--Sobic009G254600 Sobic003G235500 Sobic003G235500 Sobic003G231800--Sobic003G235500 Sobic004G267000--Sobic009G244300 Sobic004G267000--Sobic009G244600 Sobic004G267000--Sobic003G231800 Sobic004G267000--Sobic003G241900 Sobic001G076900 Sobic001G076900 Sobic004G267000--Sobic001G076900 Sobic005G056400 Sobic005G056400 Sobic004G267000--Sobic005G056400 Sobic002G116000 Sobic002G116000 Sobic004G267000--Sobic002G116000 Sobic004G267000--Sobic004G305800 Sobic007G004850 Sobic007G004850 Sobic004G267000--Sobic007G004850 Sobic009G244600--Sobic003G231800 Sobic009G244600--Sobic009G244300 Sobic009G244600--Sobic004G267000 Sobic009G244600--Sobic006G006700 Sobic009G244600--Sobic003G241900 Sobic003G237600 Sobic003G237600 Sobic009G244600--Sobic003G237600 Sobic009G244600--Sobic003G199800 Sobic001G068400 Sobic001G068400 Sobic009G244600--Sobic001G068400 Sobic001G189100 Sobic001G189100 Sobic009G244600--Sobic001G189100 Sobic007G034300--Sobic001G520800 Sobic005G165500 Sobic005G165500 Sobic007G034300--Sobic005G165500 Sobic007G034300--Sobic009G244300 Sobic008G053200 Sobic008G053200 Sobic007G034300--Sobic008G053200 Sobic004G283100 Sobic004G283100 Sobic007G034300--Sobic004G283100 Sobic007G034300--Sobic008G104601 Sobic002G233300 Sobic002G233300 Sobic007G034300--Sobic002G233300 Sobic007G034300--Sobic003G231800 Sobic007G034300--Sobic004G305800 Sobic003G241900--Sobic009G244300 Sobic010G153900 Sobic010G153900 Sobic003G241900--Sobic010G153900 Sobic002G421300 Sobic002G421300 Sobic003G241900--Sobic002G421300 Sobic003G241900--Sobic004G267000 Sobic003G241900--Sobic003G231800 Sobic003G241900--Sobic007G034300 Sobic003G241900--Sobic004G305800 Sobic003G241900--Sobic001G076900 Sobic010G201700 Sobic010G201700 Sobic003G241900--Sobic010G201700 Sobic001G520800--Sobic007G034300 Sobic005G039600 Sobic005G039600 Sobic001G520800--Sobic005G039600 Sobic001G520800--Sobic003G199800 Sobic001G520800--Sobic008G104601 Sobic001G520800--Sobic003G231800 Sobic001G520800--Sobic002G233300 Sobic001G520800--Sobic009G244300 Sobic007G189700 Sobic007G189700 Sobic001G520800--Sobic007G189700 Sobic003G431900 Sobic003G431900 Sobic001G520800--Sobic003G431900 Sobic002G370600 Sobic002G370600 Sobic004G305800--Sobic002G370600 Sobic001G491000 Sobic001G491000 Sobic004G305800--Sobic001G491000 Sobic004G305800--Sobic005G056400 Sobic009G129300 Sobic009G129300 Sobic004G305800--Sobic009G129300 Sobic004G268000 Sobic004G268000 Sobic004G305800--Sobic004G268000 Sobic004G305800--Sobic010G201700 Sobic007G161500 Sobic007G161500 Sobic004G305800--Sobic007G161500 Sobic004G305800--Sobic003G431900 Sobic006G238200 Sobic006G238200 Sobic004G305800--Sobic006G238200 Sobic006G244000 Sobic006G244000 Sobic008G104601--Sobic006G244000 Sobic008G104601--Sobic007G034300 Sobic008G104601--Sobic001G520800 Sobic001G329400 Sobic001G329400 Sobic008G104601--Sobic001G329400 Sobic008G104601--Sobic003G431900 Sobic003G256700 Sobic003G256700 Sobic008G104601--Sobic003G256700 Sobic004G125700 Sobic004G125700 Sobic008G104601--Sobic004G125700 Sobic006G051300 Sobic006G051300 Sobic008G104601--Sobic006G051300 Sobic009G104800 Sobic009G104800 Sobic008G104601--Sobic009G104800 Sobic002G040100 Sobic002G040100 Sobic003G199800--Sobic002G040100 Sobic010G276400 Sobic010G276400 Sobic003G199800--Sobic010G276400 Sobic002G000500 Sobic002G000500 Sobic003G199800--Sobic002G000500 Sobic003G199800--Sobic010G183100 Sobic004G035500 Sobic004G035500 Sobic003G199800--Sobic004G035500 Sobic008G038300 Sobic008G038300 Sobic003G199800--Sobic008G038300 Sobic010G109500 Sobic010G109500 Sobic003G199800--Sobic010G109500 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300
Octagon: transcription factors


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