Gene annotation
Transcriptome id Sobic.007G004850.1
Synonym -
Functional annotation -
UniProt A0A1Z5R854
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G231800 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
2 Sobic.009G244300 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
3 Sobic.004G267000 RAD-like 6(PubMedID : 26465154)@MYB family transcription factor, putative, expressed -
4 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
5 Sobic.008G104601 - -
6 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
7 Sobic.009G244600 MYB family transcription factor, putative, expressed -
8 Sobic.007G214300 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.003G241900 expressed protein -
11 Sobic.004G035700 - -
12 Sobic.010G095000 kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
13 Sobic.006G006700 - -
14 Sobic.003G199800 expressed protein -
15 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.007G034300 expressed protein -
17 Sobic.001G520800 expressed protein -
18 Sobic.003G036100 - -
19 Sobic.001G076900 Uncharacterised protein family (UPF0497)(PubMedID : 26465154)@membrane associated DUF588 domain containing protein, putative, expressed -
20 Sobic.003G235500 expressed protein -


Gene co-expression network
sample Sobic007G004850 Sobic007G004850 Sobic003G231800 Sobic003G231800 Sobic007G004850--Sobic003G231800 Sobic009G244300 Sobic009G244300 Sobic007G004850--Sobic009G244300 Sobic004G267000 Sobic004G267000 Sobic007G004850--Sobic004G267000 Sobic010G183100 Sobic010G183100 Sobic007G004850--Sobic010G183100 Sobic008G104601 Sobic008G104601 Sobic007G004850--Sobic008G104601 Sobic008G081200 Sobic008G081200 Sobic007G004850--Sobic008G081200 Sobic009G244600 Sobic009G244600 Sobic007G004850--Sobic009G244600 Sobic007G214300 Sobic007G214300 Sobic007G004850--Sobic007G214300 Sobic009G254600 Sobic009G254600 Sobic007G004850--Sobic009G254600 Sobic003G231800--Sobic009G244300 Sobic003G231800--Sobic009G244600 Sobic003G231800--Sobic004G267000 Sobic003G231800--Sobic010G183100 Sobic007G034300 Sobic007G034300 Sobic003G231800--Sobic007G034300 Sobic001G520800 Sobic001G520800 Sobic003G231800--Sobic001G520800 Sobic006G006700 Sobic006G006700 Sobic003G231800--Sobic006G006700 Sobic003G231800--Sobic009G254600 Sobic003G235500 Sobic003G235500 Sobic003G231800--Sobic003G235500 Sobic009G244300--Sobic003G231800 Sobic009G244300--Sobic004G267000 Sobic009G244300--Sobic009G244600 Sobic009G244300--Sobic007G034300 Sobic003G241900 Sobic003G241900 Sobic009G244300--Sobic003G241900 Sobic009G244300--Sobic001G520800 Sobic004G305800 Sobic004G305800 Sobic009G244300--Sobic004G305800 Sobic009G244300--Sobic008G104601 Sobic003G199800 Sobic003G199800 Sobic009G244300--Sobic003G199800 Sobic004G267000--Sobic009G244300 Sobic004G267000--Sobic009G244600 Sobic004G267000--Sobic003G231800 Sobic004G267000--Sobic003G241900 Sobic001G076900 Sobic001G076900 Sobic004G267000--Sobic001G076900 Sobic005G056400 Sobic005G056400 Sobic004G267000--Sobic005G056400 Sobic002G116000 Sobic002G116000 Sobic004G267000--Sobic002G116000 Sobic004G267000--Sobic004G305800 Sobic004G267000--Sobic007G004850 Sobic004G035700 Sobic004G035700 Sobic010G183100--Sobic004G035700 Sobic007G189700 Sobic007G189700 Sobic010G183100--Sobic007G189700 Sobic010G183100--Sobic008G081200 Sobic001G068400 Sobic001G068400 Sobic010G183100--Sobic001G068400 Sobic010G183100--Sobic003G199800 Sobic010G038500 Sobic010G038500 Sobic010G183100--Sobic010G038500 Sobic002G040100 Sobic002G040100 Sobic010G183100--Sobic002G040100 Sobic010G183100--Sobic009G254600 Sobic009G222200 Sobic009G222200 Sobic010G183100--Sobic009G222200 Sobic006G244000 Sobic006G244000 Sobic008G104601--Sobic006G244000 Sobic008G104601--Sobic007G034300 Sobic008G104601--Sobic001G520800 Sobic001G329400 Sobic001G329400 Sobic008G104601--Sobic001G329400 Sobic003G431900 Sobic003G431900 Sobic008G104601--Sobic003G431900 Sobic003G256700 Sobic003G256700 Sobic008G104601--Sobic003G256700 Sobic004G125700 Sobic004G125700 Sobic008G104601--Sobic004G125700 Sobic006G051300 Sobic006G051300 Sobic008G104601--Sobic006G051300 Sobic009G104800 Sobic009G104800 Sobic008G104601--Sobic009G104800 Sobic008G081200--Sobic010G038500 Sobic008G081200--Sobic010G183100 Sobic008G081200--Sobic009G254600 Sobic008G081200--Sobic001G068400 Sobic008G081200--Sobic002G040100 Sobic008G081200--Sobic004G035700 Sobic008G081200--Sobic003G199800 Sobic008G081200--Sobic007G189700 Sobic010G276400 Sobic010G276400 Sobic008G081200--Sobic010G276400 Sobic009G244600--Sobic003G231800 Sobic009G244600--Sobic009G244300 Sobic009G244600--Sobic004G267000 Sobic009G244600--Sobic006G006700 Sobic009G244600--Sobic003G241900 Sobic003G237600 Sobic003G237600 Sobic009G244600--Sobic003G237600 Sobic009G244600--Sobic003G199800 Sobic009G244600--Sobic001G068400 Sobic001G189100 Sobic001G189100 Sobic009G244600--Sobic001G189100 Sobic002G195200 Sobic002G195200 Sobic007G214300--Sobic002G195200 Sobic004G245300 Sobic004G245300 Sobic007G214300--Sobic004G245300 Sobic005G065500 Sobic005G065500 Sobic007G214300--Sobic005G065500 Sobic007G214300--Sobic006G006700 Sobic002G195100 Sobic002G195100 Sobic007G214300--Sobic002G195100 Sobic004G223500 Sobic004G223500 Sobic007G214300--Sobic004G223500 Sobic002G195300 Sobic002G195300 Sobic007G214300--Sobic002G195300 Sobic007G214300--Sobic003G231800 Sobic007G214300--Sobic007G004850 Sobic009G254600--Sobic010G038500 Sobic009G254600--Sobic008G081200 Sobic009G254600--Sobic001G189100 Sobic009G254600--Sobic004G035700 Sobic009G254600--Sobic003G237600 Sobic009G254600--Sobic010G183100 Sobic009G254600--Sobic001G068400 Sobic009G254600--Sobic007G189700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.