Gene annotation
Transcriptome id Sobic.010G095000.1
Synonym Sb10g008280
Functional annotation kinase, pfkB family, putative, expressed
UniProt C5Z7E8
Pfam PF00294
Panther DB PTHR10584 PTHR10584:SF181
NCBI CDD KOG2855; Ribokinase
KEGG Orthology K00847; E2.7.1.4, fructokinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G66430 : pfkB-like carbohydrate kinase family protein
RAP-DB (Rice) LOC_Os06g12600.1 : kinase, pfkB family, putative, expressed
MaizeGDB (Corn) Zm00025a049450
Brachypodium KQK18835 , PNT76156
Barley HORVU7Hr1G038710.2 , HORVU7Hr1G038710.3 , HORVU7Hr1G038710.1 , HORVU7Hr1G038710.6 , HORVU7Hr1G038710.4 , HORVU7Hr1G038710.5
Wheat TraesCS7A02G190500 , TraesCS7B02G095400 , TraesCS7B02G095400 , TraesCS7D02G191500 , TraesCS7B02G095400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G076900 Uncharacterised protein family (UPF0497)(PubMedID : 26465154)@membrane associated DUF588 domain containing protein, putative, expressed -
2 Sobic.003G234400 CA(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
3 Sobic.006G008700 bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed K13811: 3'-phosphoadenosine 5'-phosphosulfate synthase
4 Sobic.005G056400 Fructose-bisphosphate aldolase(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Fructose-bisphosphate aldolase, putative (Os)"(PubMedID : 27208977)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
5 Sobic.010G153900 Spermidine synthase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@"OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659935)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
6 Sobic.004G305800 expressed protein -
7 Sobic.010G201700 GA16396-PA, putative, expressed -
8 Sobic.004G125700 isochorismatase family protein, putative, expressed -
9 Sobic.005G200200 expressed protein -
10 Sobic.009G104800 AMP deaminase, putative, expressed K01490: AMP deaminase
11 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
12 Sobic.009G043000 thioredoxin, putative, expressed -
13 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
14 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
15 Sobic.003G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyll A-B binding protein, putative, expressed K03542: photosystem II 22kDa protein
16 Sobic.003G303700 Protein thylakoid membrane phosphoprotein 14 kda (Os)(PubMedID : 27208977)@expressed protein -
17 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
18 Sobic.001G020100 expressed protein -
19 Sobic.004G035500 -(PubMedID : 26976818)@Involved in photorespiratory pathway(PubMedID : 12887583)@dicarboxylate transporter 3(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
20 Sobic.002G098800 peroxiredoxin, putative, expressed -


Gene co-expression network
sample Sobic010G095000 Sobic010G095000 Sobic001G076900 Sobic001G076900 Sobic010G095000--Sobic001G076900 Sobic003G234400 Sobic003G234400 Sobic010G095000--Sobic003G234400 Sobic006G008700 Sobic006G008700 Sobic010G095000--Sobic006G008700 Sobic005G056400 Sobic005G056400 Sobic010G095000--Sobic005G056400 Sobic010G153900 Sobic010G153900 Sobic010G095000--Sobic010G153900 Sobic004G305800 Sobic004G305800 Sobic010G095000--Sobic004G305800 Sobic010G201700 Sobic010G201700 Sobic010G095000--Sobic010G201700 Sobic004G125700 Sobic004G125700 Sobic010G095000--Sobic004G125700 Sobic005G200200 Sobic005G200200 Sobic010G095000--Sobic005G200200 Sobic001G076900--Sobic005G056400 Sobic003G370000 Sobic003G370000 Sobic001G076900--Sobic003G370000 Sobic001G076900--Sobic010G095000 Sobic001G020100 Sobic001G020100 Sobic001G076900--Sobic001G020100 Sobic001G076900--Sobic004G305800 Sobic001G076900--Sobic003G234400 Sobic005G202500 Sobic005G202500 Sobic001G076900--Sobic005G202500 Sobic002G370600 Sobic002G370600 Sobic001G076900--Sobic002G370600 Sobic004G283100 Sobic004G283100 Sobic001G076900--Sobic004G283100 Sobic003G234400--Sobic006G008700 Sobic003G234400--Sobic010G095000 Sobic003G303700 Sobic003G303700 Sobic003G234400--Sobic003G303700 Sobic008G021300 Sobic008G021300 Sobic003G234400--Sobic008G021300 Sobic004G353700 Sobic004G353700 Sobic003G234400--Sobic004G353700 Sobic008G061401 Sobic008G061401 Sobic003G234400--Sobic008G061401 Sobic003G234400--Sobic001G076900 Sobic004G026300 Sobic004G026300 Sobic003G234400--Sobic004G026300 Sobic003G234400--Sobic010G201700 Sobic006G008700--Sobic003G234400 Sobic006G008700--Sobic010G095000 Sobic006G008700--Sobic003G303700 Sobic006G008700--Sobic010G201700 Sobic006G008700--Sobic008G021300 Sobic006G008700--Sobic004G125700 Sobic007G140800 Sobic007G140800 Sobic006G008700--Sobic007G140800 Sobic006G008700--Sobic001G076900 Sobic004G035500 Sobic004G035500 Sobic006G008700--Sobic004G035500 Sobic007G161500 Sobic007G161500 Sobic005G056400--Sobic007G161500 Sobic005G056400--Sobic004G305800 Sobic003G127800 Sobic003G127800 Sobic005G056400--Sobic003G127800 Sobic005G056400--Sobic003G370000 Sobic010G188300 Sobic010G188300 Sobic005G056400--Sobic010G188300 Sobic005G056400--Sobic001G076900 Sobic001G491000 Sobic001G491000 Sobic005G056400--Sobic001G491000 Sobic001G329400 Sobic001G329400 Sobic005G056400--Sobic001G329400 Sobic006G057866 Sobic006G057866 Sobic005G056400--Sobic006G057866 Sobic010G153900--Sobic007G140800 Sobic008G188600 Sobic008G188600 Sobic010G153900--Sobic008G188600 Sobic009G043000 Sobic009G043000 Sobic010G153900--Sobic009G043000 Sobic010G153900--Sobic010G201700 Sobic010G153900--Sobic003G303700 Sobic010G153900--Sobic010G095000 Sobic006G207800 Sobic006G207800 Sobic010G153900--Sobic006G207800 Sobic003G241900 Sobic003G241900 Sobic010G153900--Sobic003G241900 Sobic010G153900--Sobic001G020100 Sobic004G305800--Sobic002G370600 Sobic004G305800--Sobic001G491000 Sobic004G305800--Sobic005G056400 Sobic009G129300 Sobic009G129300 Sobic004G305800--Sobic009G129300 Sobic004G268000 Sobic004G268000 Sobic004G305800--Sobic004G268000 Sobic004G305800--Sobic010G201700 Sobic004G305800--Sobic007G161500 Sobic003G431900 Sobic003G431900 Sobic004G305800--Sobic003G431900 Sobic006G238200 Sobic006G238200 Sobic004G305800--Sobic006G238200 Sobic010G201700--Sobic009G043000 Sobic004G272100 Sobic004G272100 Sobic010G201700--Sobic004G272100 Sobic003G002300 Sobic003G002300 Sobic010G201700--Sobic003G002300 Sobic001G102800 Sobic001G102800 Sobic010G201700--Sobic001G102800 Sobic001G519800 Sobic001G519800 Sobic010G201700--Sobic001G519800 Sobic007G225500 Sobic007G225500 Sobic010G201700--Sobic007G225500 Sobic008G102000 Sobic008G102000 Sobic010G201700--Sobic008G102000 Sobic010G201700--Sobic006G207800 Sobic004G308700 Sobic004G308700 Sobic010G201700--Sobic004G308700 Sobic009G104800 Sobic009G104800 Sobic004G125700--Sobic009G104800 Sobic003G024300 Sobic003G024300 Sobic004G125700--Sobic003G024300 Sobic004G125700--Sobic007G140800 Sobic004G125700--Sobic001G329400 Sobic006G077400 Sobic006G077400 Sobic004G125700--Sobic006G077400 Sobic004G125700--Sobic010G201700 Sobic004G125700--Sobic003G431900 Sobic006G244000 Sobic006G244000 Sobic004G125700--Sobic006G244000 Sobic004G125700--Sobic004G272100 Sobic005G200200--Sobic006G077400 Sobic005G200200--Sobic007G225500 Sobic005G200200--Sobic003G370000 Sobic005G200200--Sobic005G056400 Sobic007G173800 Sobic007G173800 Sobic005G200200--Sobic007G173800 Sobic002G277100 Sobic002G277100 Sobic005G200200--Sobic002G277100 Sobic005G200200--Sobic009G043000 Sobic005G200200--Sobic010G095000 Sobic005G200200--Sobic003G002300
Octagon: transcription factors


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