Gene annotation
Transcriptome id Sobic.003G303700.2
Synonym Sb03g035235
Functional annotation Protein thylakoid membrane phosphoprotein 14 kda (Os) (PubMedID : 27208977)
expressed protein
UniProt A0A1W0VZP4
Pfam PF14159
Panther DB PTHR33222 PTHR33222:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G52220 : -
RAP-DB (Rice) LOC_Os01g55570.1 : expressed protein
MaizeGDB (Corn) Zm00025a027487 , Zm00025a039978
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G303700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
2 Sobic.010G201700 GA16396-PA, putative, expressed -
3 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
4 Sobic.002G152700 rhodanese-like, putative, expressed -
5 Sobic.009G043000 thioredoxin, putative, expressed -
6 Sobic.001G102800 expressed protein -
7 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
8 Sobic.004G274100 expressed protein -
9 Sobic.010G153900 Spermidine synthase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@"OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659935)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
10 Sobic.002G098800 peroxiredoxin, putative, expressed -
11 Sobic.003G234400 CA(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
12 Sobic.006G008700 bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed K13811: 3'-phosphoadenosine 5'-phosphosulfate synthase
13 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
14 Sobic.002G277100 -(PubMedID : 29017446)@triosephosphate isomerase, chloroplast precursor, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
15 Sobic.001G519800 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K05298: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating)
16 Sobic.007G004800 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
17 Sobic.006G272900 peroxidase activity(PubMedID : 29491869)@glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
18 Sobic.009G113800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os5bglu20 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
19 Sobic.004G035500 -(PubMedID : 26976818)@Involved in photorespiratory pathway(PubMedID : 12887583)@dicarboxylate transporter 3(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
20 Sobic.009G125400 FZL, putative, expressed -


Gene co-expression network
sample Sobic003G303700 Sobic003G303700 Sobic008G021300 Sobic008G021300 Sobic003G303700--Sobic008G021300 Sobic010G201700 Sobic010G201700 Sobic003G303700--Sobic010G201700 Sobic007G140800 Sobic007G140800 Sobic003G303700--Sobic007G140800 Sobic002G152700 Sobic002G152700 Sobic003G303700--Sobic002G152700 Sobic009G043000 Sobic009G043000 Sobic003G303700--Sobic009G043000 Sobic001G102800 Sobic001G102800 Sobic003G303700--Sobic001G102800 Sobic004G272100 Sobic004G272100 Sobic003G303700--Sobic004G272100 Sobic004G274100 Sobic004G274100 Sobic003G303700--Sobic004G274100 Sobic010G153900 Sobic010G153900 Sobic003G303700--Sobic010G153900 Sobic008G021300--Sobic003G303700 Sobic008G021300--Sobic002G152700 Sobic007G004800 Sobic007G004800 Sobic008G021300--Sobic007G004800 Sobic006G272900 Sobic006G272900 Sobic008G021300--Sobic006G272900 Sobic004G035500 Sobic004G035500 Sobic008G021300--Sobic004G035500 Sobic008G021300--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic008G021300--Sobic001G519800 Sobic008G021300--Sobic001G102800 Sobic008G021300--Sobic009G043000 Sobic010G201700--Sobic009G043000 Sobic010G201700--Sobic004G272100 Sobic003G002300 Sobic003G002300 Sobic010G201700--Sobic003G002300 Sobic010G201700--Sobic001G102800 Sobic010G201700--Sobic001G519800 Sobic007G225500 Sobic007G225500 Sobic010G201700--Sobic007G225500 Sobic008G102000 Sobic008G102000 Sobic010G201700--Sobic008G102000 Sobic006G207800 Sobic006G207800 Sobic010G201700--Sobic006G207800 Sobic004G308700 Sobic004G308700 Sobic010G201700--Sobic004G308700 Sobic006G077400 Sobic006G077400 Sobic007G140800--Sobic006G077400 Sobic007G140800--Sobic003G303700 Sobic007G140800--Sobic010G201700 Sobic003G024300 Sobic003G024300 Sobic007G140800--Sobic003G024300 Sobic007G140800--Sobic010G153900 Sobic001G329400 Sobic001G329400 Sobic007G140800--Sobic001G329400 Sobic007G009200 Sobic007G009200 Sobic007G140800--Sobic007G009200 Sobic004G125700 Sobic004G125700 Sobic007G140800--Sobic004G125700 Sobic009G237100 Sobic009G237100 Sobic007G140800--Sobic009G237100 Sobic002G152700--Sobic008G021300 Sobic001G527000 Sobic001G527000 Sobic002G152700--Sobic001G527000 Sobic002G033800 Sobic002G033800 Sobic002G152700--Sobic002G033800 Sobic002G152700--Sobic003G303700 Sobic010G005500 Sobic010G005500 Sobic002G152700--Sobic010G005500 Sobic002G152700--Sobic006G272900 Sobic004G343300 Sobic004G343300 Sobic002G152700--Sobic004G343300 Sobic009G030900 Sobic009G030900 Sobic002G152700--Sobic009G030900 Sobic003G132100 Sobic003G132100 Sobic002G152700--Sobic003G132100 Sobic009G043000--Sobic010G201700 Sobic009G043000--Sobic003G002300 Sobic009G043000--Sobic008G102000 Sobic009G043000--Sobic001G102800 Sobic009G043000--Sobic007G225500 Sobic009G043000--Sobic004G272100 Sobic009G043000--Sobic006G207800 Sobic009G140600 Sobic009G140600 Sobic009G043000--Sobic009G140600 Sobic009G043000--Sobic001G519800 Sobic001G102800--Sobic006G207800 Sobic001G102800--Sobic001G519800 Sobic001G102800--Sobic003G002300 Sobic001G102800--Sobic010G201700 Sobic001G102800--Sobic009G043000 Sobic001G102800--Sobic004G272100 Sobic001G102800--Sobic007G009200 Sobic007G052400 Sobic007G052400 Sobic001G102800--Sobic007G052400 Sobic003G431700 Sobic003G431700 Sobic001G102800--Sobic003G431700 Sobic004G272100--Sobic004G308700 Sobic004G272100--Sobic010G201700 Sobic004G272100--Sobic001G519800 Sobic002G051100 Sobic002G051100 Sobic004G272100--Sobic002G051100 Sobic004G272100--Sobic003G002300 Sobic004G272100--Sobic008G102000 Sobic004G272100--Sobic009G043000 Sobic004G272100--Sobic001G102800 Sobic008G066100 Sobic008G066100 Sobic004G272100--Sobic008G066100 Sobic004G274100--Sobic007G140800 Sobic004G274100--Sobic003G303700 Sobic002G098800 Sobic002G098800 Sobic004G274100--Sobic002G098800 Sobic009G113800 Sobic009G113800 Sobic004G274100--Sobic009G113800 Sobic004G274100--Sobic001G102800 Sobic004G274100--Sobic008G021300 Sobic004G274100--Sobic010G201700 Sobic001G069000 Sobic001G069000 Sobic004G274100--Sobic001G069000 Sobic008G188600 Sobic008G188600 Sobic004G274100--Sobic008G188600 Sobic010G153900--Sobic007G140800 Sobic010G153900--Sobic008G188600 Sobic010G153900--Sobic009G043000 Sobic010G153900--Sobic010G201700 Sobic010G153900--Sobic003G303700 Sobic010G095000 Sobic010G095000 Sobic010G153900--Sobic010G095000 Sobic010G153900--Sobic006G207800 Sobic003G241900 Sobic003G241900 Sobic010G153900--Sobic003G241900 Sobic001G020100 Sobic001G020100 Sobic010G153900--Sobic001G020100
Octagon: transcription factors


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