Gene annotation
Transcriptome id Sobic.004G274100.4,Sobic.004G274100.2,Sobic.004G274100.3,Sobic.004G274100.1
Synonym Sb04g031140
Functional annotation expressed protein
UniProt A0A194YRZ2 , A0A194YRV3 , C5Y0Z0
Pfam -
Panther DB PTHR36796
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16810 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g46750.1,LOC_Os02g46750.2 : expressed protein
MaizeGDB (Corn) Zm00025a032380
Brachypodium KQK00857 , PNT69264
Barley HORVU6Hr1G067390.19 , HORVU6Hr1G067390.18 , HORVU6Hr1G067390.17 , HORVU6Hr1G067390.16 , HORVU6Hr1G067390.15 , HORVU6Hr1G067390.14 , HORVU6Hr1G067390.13 , HORVU6Hr1G067390.12 , HORVU6Hr1G067390.11 , HORVU6Hr1G067390.10 , HORVU6Hr1G067390.31 , HORVU6Hr1G067390.30 , HORVU6Hr1G067390.33 , HORVU6Hr1G067390.32 , HORVU6Hr1G067390.35 , HORVU6Hr1G067390.34 , HORVU6Hr1G067390.36 , HORVU6Hr1G067390.26 , HORVU6Hr1G067390.27 , HORVU6Hr1G067390.24 , HORVU6Hr1G067390.25 , HORVU6Hr1G067390.22 , HORVU6Hr1G067390.23 , HORVU6Hr1G067390.20 , HORVU6Hr1G067390.21 , HORVU6Hr1G067390.28 , HORVU6Hr1G067390.29 , HORVU6Hr1G067390.7 , HORVU6Hr1G067390.6 , HORVU6Hr1G067390.5 , HORVU6Hr1G067390.4 , HORVU6Hr1G067390.3 , HORVU6Hr1G067390.2 , HORVU6Hr1G067390.1 , HORVU6Hr1G067390.9 , HORVU6Hr1G067390.8
Wheat TraesCS6D02G249300 , TraesCS6D02G249300 , TraesCS6D02G249300 , TraesCS6A02G265400 , TraesCS6A02G265400 , TraesCS6A02G265400 , TraesCS6B02G292400 , TraesCS6B02G292400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
2 Sobic.003G303700 Protein thylakoid membrane phosphoprotein 14 kda (Os)(PubMedID : 27208977)@expressed protein -
3 Sobic.002G098800 peroxiredoxin, putative, expressed -
4 Sobic.009G113800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os5bglu20 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
5 Sobic.001G102800 expressed protein -
6 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
7 Sobic.010G201700 GA16396-PA, putative, expressed -
8 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
9 Sobic.008G188600 glyoxalase family protein, putative, expressed -
10 Sobic.009G125400 FZL, putative, expressed -
11 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
12 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
13 Sobic.009G043000 thioredoxin, putative, expressed -
14 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
15 Sobic.006G010900 expressed protein -
16 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
17 Sobic.001G314200 expressed protein -
18 Sobic.004G094100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@GATA zinc finger domain containing protein, expressed -
19 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
20 Sobic.002G152700 rhodanese-like, putative, expressed -


Gene co-expression network
sample Sobic004G274100 Sobic004G274100 Sobic007G140800 Sobic007G140800 Sobic004G274100--Sobic007G140800 Sobic003G303700 Sobic003G303700 Sobic004G274100--Sobic003G303700 Sobic002G098800 Sobic002G098800 Sobic004G274100--Sobic002G098800 Sobic009G113800 Sobic009G113800 Sobic004G274100--Sobic009G113800 Sobic001G102800 Sobic001G102800 Sobic004G274100--Sobic001G102800 Sobic008G021300 Sobic008G021300 Sobic004G274100--Sobic008G021300 Sobic010G201700 Sobic010G201700 Sobic004G274100--Sobic010G201700 Sobic001G069000 Sobic001G069000 Sobic004G274100--Sobic001G069000 Sobic008G188600 Sobic008G188600 Sobic004G274100--Sobic008G188600 Sobic006G077400 Sobic006G077400 Sobic007G140800--Sobic006G077400 Sobic007G140800--Sobic003G303700 Sobic007G140800--Sobic010G201700 Sobic003G024300 Sobic003G024300 Sobic007G140800--Sobic003G024300 Sobic010G153900 Sobic010G153900 Sobic007G140800--Sobic010G153900 Sobic001G329400 Sobic001G329400 Sobic007G140800--Sobic001G329400 Sobic007G009200 Sobic007G009200 Sobic007G140800--Sobic007G009200 Sobic004G125700 Sobic004G125700 Sobic007G140800--Sobic004G125700 Sobic009G237100 Sobic009G237100 Sobic007G140800--Sobic009G237100 Sobic003G303700--Sobic008G021300 Sobic003G303700--Sobic010G201700 Sobic003G303700--Sobic007G140800 Sobic002G152700 Sobic002G152700 Sobic003G303700--Sobic002G152700 Sobic009G043000 Sobic009G043000 Sobic003G303700--Sobic009G043000 Sobic003G303700--Sobic001G102800 Sobic004G272100 Sobic004G272100 Sobic003G303700--Sobic004G272100 Sobic003G303700--Sobic004G274100 Sobic003G303700--Sobic010G153900 Sobic002G098800--Sobic001G069000 Sobic004G308700 Sobic004G308700 Sobic002G098800--Sobic004G308700 Sobic002G098800--Sobic008G021300 Sobic002G098800--Sobic004G272100 Sobic008G066100 Sobic008G066100 Sobic002G098800--Sobic008G066100 Sobic004G035500 Sobic004G035500 Sobic002G098800--Sobic004G035500 Sobic002G098800--Sobic010G201700 Sobic002G098800--Sobic003G303700 Sobic002G098800--Sobic004G274100 Sobic006G207800 Sobic006G207800 Sobic009G113800--Sobic006G207800 Sobic009G113800--Sobic007G140800 Sobic009G113800--Sobic001G102800 Sobic009G113800--Sobic004G274100 Sobic002G193800 Sobic002G193800 Sobic009G113800--Sobic002G193800 Sobic004G331700 Sobic004G331700 Sobic009G113800--Sobic004G331700 Sobic009G113800--Sobic003G303700 Sobic009G113800--Sobic009G237100 Sobic009G113800--Sobic007G009200 Sobic001G102800--Sobic006G207800 Sobic001G519800 Sobic001G519800 Sobic001G102800--Sobic001G519800 Sobic003G002300 Sobic003G002300 Sobic001G102800--Sobic003G002300 Sobic001G102800--Sobic010G201700 Sobic001G102800--Sobic009G043000 Sobic001G102800--Sobic004G272100 Sobic001G102800--Sobic007G009200 Sobic007G052400 Sobic007G052400 Sobic001G102800--Sobic007G052400 Sobic003G431700 Sobic003G431700 Sobic001G102800--Sobic003G431700 Sobic008G021300--Sobic003G303700 Sobic008G021300--Sobic002G152700 Sobic007G004800 Sobic007G004800 Sobic008G021300--Sobic007G004800 Sobic006G272900 Sobic006G272900 Sobic008G021300--Sobic006G272900 Sobic008G021300--Sobic004G035500 Sobic008G021300--Sobic010G201700 Sobic008G021300--Sobic001G519800 Sobic008G021300--Sobic001G102800 Sobic008G021300--Sobic009G043000 Sobic010G201700--Sobic009G043000 Sobic010G201700--Sobic004G272100 Sobic010G201700--Sobic003G002300 Sobic010G201700--Sobic001G102800 Sobic010G201700--Sobic001G519800 Sobic007G225500 Sobic007G225500 Sobic010G201700--Sobic007G225500 Sobic008G102000 Sobic008G102000 Sobic010G201700--Sobic008G102000 Sobic010G201700--Sobic006G207800 Sobic010G201700--Sobic004G308700 Sobic003G412900 Sobic003G412900 Sobic001G069000--Sobic003G412900 Sobic009G125400 Sobic009G125400 Sobic001G069000--Sobic009G125400 Sobic001G069000--Sobic002G098800 Sobic006G010900 Sobic006G010900 Sobic001G069000--Sobic006G010900 Sobic001G536800 Sobic001G536800 Sobic001G069000--Sobic001G536800 Sobic001G069000--Sobic004G308700 Sobic003G387100 Sobic003G387100 Sobic001G069000--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic001G069000--Sobic001G314200 Sobic001G069000--Sobic004G272100 Sobic008G188600--Sobic003G387100 Sobic008G188600--Sobic009G043000 Sobic008G188600--Sobic008G102000 Sobic008G188600--Sobic006G207800 Sobic009G059300 Sobic009G059300 Sobic008G188600--Sobic009G059300 Sobic006G067400 Sobic006G067400 Sobic008G188600--Sobic006G067400 Sobic008G188600--Sobic010G201700 Sobic008G188600--Sobic010G153900 Sobic008G188600--Sobic007G225500
Octagon: transcription factors


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