Gene annotation
Transcriptome id Sobic.006G010900.1
Synonym Sb06g001090, HCF101
Functional annotation expressed protein
UniProt C5YBS0
Pfam PF06155 PF01883 PF01656
Panther DB PTHR23264 PTHR23264:SF29
NCBI CDD KOG3022; Predicted ATPase, nucleotide-binding
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24430 : ATP binding
RAP-DB (Rice) LOC_Os01g52170.1 : expressed protein
MaizeGDB (Corn) Zm00025a012249
Brachypodium KQK09506
Barley HORVU3Hr1G068300.8 , HORVU3Hr1G068300.9 , HORVU3Hr1G068300.1 , HORVU3Hr1G068300.2 , HORVU3Hr1G068300.3 , HORVU3Hr1G068300.4 , HORVU3Hr1G068300.5 , HORVU3Hr1G068300.6 , HORVU3Hr1G068300.7 , HORVU3Hr1G068300.29 , HORVU3Hr1G068300.28 , HORVU3Hr1G068300.23 , HORVU3Hr1G068300.22 , HORVU3Hr1G068300.21 , HORVU3Hr1G068300.20 , HORVU3Hr1G068300.27 , HORVU3Hr1G068300.26 , HORVU3Hr1G068300.25 , HORVU3Hr1G068300.24 , HORVU3Hr1G068300.38 , HORVU3Hr1G068300.39 , HORVU3Hr1G068300.32 , HORVU3Hr1G068300.12 , HORVU3Hr1G068300.13 , HORVU3Hr1G068300.10 , HORVU3Hr1G068300.11 , HORVU3Hr1G068300.16 , HORVU3Hr1G068300.17 , HORVU3Hr1G068300.14 , HORVU3Hr1G068300.15 , HORVU3Hr1G068300.18 , HORVU3Hr1G068300.19 , HORVU3Hr1G068300.30 , HORVU3Hr1G068300.31 , HORVU3Hr1G068300.33 , HORVU3Hr1G068300.34 , HORVU3Hr1G068300.35 , HORVU3Hr1G068300.36 , HORVU3Hr1G068300.37 , HORVU3Hr1G068300.40
Wheat TraesCS3D02G288000 , TraesCS3B02G322800 , TraesCS3B02G322800 , TraesCS3B02G322800 , TraesCS3B02G322800 , TraesCS3A02G288200 , TraesCS3A02G288200 , TraesCS3A02G288200 , TraesCS3A02G288200 , TraesCS3A02G288200 , TraesCS3A02G288200 , TraesCS3A02G288200 , TraesCS3D02G288000 , TraesCS3D02G288000 , TraesCS3D02G288000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
2 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
3 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
4 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
5 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
6 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
7 Sobic.008G116300 expressed protein -
8 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
9 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
10 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
11 Sobic.001G308200 cytochrome P450 97B2, putative, expressed K09837: LUT1, carotenoid epsilon hydroxylase
12 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
13 Sobic.010G214100 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed K00058: serA, D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase
14 Sobic.006G101500 expressed protein -
15 Sobic.001G124800 expressed protein -
16 Sobic.001G126300 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
17 Sobic.001G102800 expressed protein -
18 Sobic.001G309300 expressed protein -
19 Sobic.004G274100 expressed protein -
20 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -


Gene co-expression network
sample Sobic006G010900 Sobic006G010900 Sobic001G069000 Sobic001G069000 Sobic006G010900--Sobic001G069000 Sobic003G387100 Sobic003G387100 Sobic006G010900--Sobic003G387100 Sobic006G210400 Sobic006G210400 Sobic006G010900--Sobic006G210400 Sobic003G160800 Sobic003G160800 Sobic006G010900--Sobic003G160800 Sobic007G085800 Sobic007G085800 Sobic006G010900--Sobic007G085800 Sobic006G207800 Sobic006G207800 Sobic006G010900--Sobic006G207800 Sobic008G116300 Sobic008G116300 Sobic006G010900--Sobic008G116300 Sobic003G077400 Sobic003G077400 Sobic006G010900--Sobic003G077400 Sobic003G412900 Sobic003G412900 Sobic006G010900--Sobic003G412900 Sobic001G069000--Sobic003G412900 Sobic009G125400 Sobic009G125400 Sobic001G069000--Sobic009G125400 Sobic002G098800 Sobic002G098800 Sobic001G069000--Sobic002G098800 Sobic001G069000--Sobic006G010900 Sobic001G536800 Sobic001G536800 Sobic001G069000--Sobic001G536800 Sobic004G308700 Sobic004G308700 Sobic001G069000--Sobic004G308700 Sobic001G069000--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic001G069000--Sobic001G314200 Sobic004G272100 Sobic004G272100 Sobic001G069000--Sobic004G272100 Sobic009G059300 Sobic009G059300 Sobic003G387100--Sobic009G059300 Sobic004G336200 Sobic004G336200 Sobic003G387100--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic003G387100--Sobic008G073100 Sobic003G387100--Sobic006G207800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G387100--Sobic004G012900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic006G210400--Sobic006G010900 Sobic006G210400--Sobic007G085800 Sobic006G256600 Sobic006G256600 Sobic006G210400--Sobic006G256600 Sobic003G141100 Sobic003G141100 Sobic006G210400--Sobic003G141100 Sobic002G297400 Sobic002G297400 Sobic006G210400--Sobic002G297400 Sobic006G210400--Sobic003G387100 Sobic001G309300 Sobic001G309300 Sobic006G210400--Sobic001G309300 Sobic010G255100 Sobic010G255100 Sobic006G210400--Sobic010G255100 Sobic001G124800 Sobic001G124800 Sobic006G210400--Sobic001G124800 Sobic003G160800--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic003G160800--Sobic005G100300 Sobic003G160800--Sobic010G035400 Sobic003G160800--Sobic003G387100 Sobic007G103400 Sobic007G103400 Sobic003G160800--Sobic007G103400 Sobic002G112400 Sobic002G112400 Sobic003G160800--Sobic002G112400 Sobic003G233700 Sobic003G233700 Sobic003G160800--Sobic003G233700 Sobic001G134700 Sobic001G134700 Sobic003G160800--Sobic001G134700 Sobic009G175500 Sobic009G175500 Sobic003G160800--Sobic009G175500 Sobic007G085800--Sobic006G210400 Sobic007G085800--Sobic006G010900 Sobic007G085800--Sobic003G412900 Sobic007G085800--Sobic008G116300 Sobic007G085800--Sobic001G069000 Sobic007G085800--Sobic003G387100 Sobic010G214100 Sobic010G214100 Sobic007G085800--Sobic010G214100 Sobic001G168800 Sobic001G168800 Sobic007G085800--Sobic001G168800 Sobic001G186200 Sobic001G186200 Sobic007G085800--Sobic001G186200 Sobic001G102800 Sobic001G102800 Sobic006G207800--Sobic001G102800 Sobic009G237100 Sobic009G237100 Sobic006G207800--Sobic009G237100 Sobic007G009200 Sobic007G009200 Sobic006G207800--Sobic007G009200 Sobic006G207800--Sobic003G387100 Sobic009G043000 Sobic009G043000 Sobic006G207800--Sobic009G043000 Sobic006G207800--Sobic010G035400 Sobic003G431700 Sobic003G431700 Sobic006G207800--Sobic003G431700 Sobic010G201700 Sobic010G201700 Sobic006G207800--Sobic010G201700 Sobic006G238200 Sobic006G238200 Sobic006G207800--Sobic006G238200 Sobic008G116300--Sobic003G387100 Sobic008G116300--Sobic007G085800 Sobic006G101500 Sobic006G101500 Sobic008G116300--Sobic006G101500 Sobic002G036000 Sobic002G036000 Sobic008G116300--Sobic002G036000 Sobic008G116300--Sobic003G412900 Sobic008G116300--Sobic001G069000 Sobic008G116300--Sobic010G214100 Sobic008G116300--Sobic006G010900 Sobic008G116300--Sobic003G077400 Sobic001G469933 Sobic001G469933 Sobic003G077400--Sobic001G469933 Sobic003G077400--Sobic008G073100 Sobic003G077400--Sobic005G110400 Sobic003G077400--Sobic004G012900 Sobic001G368500 Sobic001G368500 Sobic003G077400--Sobic001G368500 Sobic002G401800 Sobic002G401800 Sobic003G077400--Sobic002G401800 Sobic003G077400--Sobic003G387100 Sobic003G077400--Sobic003G160800 Sobic003G077400--Sobic004G336200 Sobic003G412900--Sobic001G069000 Sobic003G412900--Sobic003G387100 Sobic003G412900--Sobic001G314200 Sobic008G102000 Sobic008G102000 Sobic003G412900--Sobic008G102000 Sobic006G093900 Sobic006G093900 Sobic003G412900--Sobic006G093900 Sobic003G412900--Sobic009G059300 Sobic003G412900--Sobic001G168800 Sobic003G412900--Sobic006G101500 Sobic009G030900 Sobic009G030900 Sobic003G412900--Sobic009G030900
Octagon: transcription factors


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