Gene annotation
Transcriptome id Sobic.001G308200.1
Synonym LUT1, CYP97C1, Sb01g030050
Functional annotation cytochrome P450 97B2, putative, expressed
UniProt A0A1B6QM31
Pfam PF00067
Panther DB PTHR24291 PTHR24291:SF52
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology K09837; LUT1, carotenoid epsilon hydroxylase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT3G53130 : Cytochrome P450 superfamily protein
RAP-DB (Rice) LOC_Os10g39930.1 : cytochrome P450 97B2, putative, expressed
MaizeGDB (Corn) Zm00025a049382 , Zm00025a003240
Brachypodium KQJ97696 , KQJ97695
Barley HORVU1Hr1G053080.26 , HORVU1Hr1G053080.27 , HORVU1Hr1G053080.24 , HORVU1Hr1G053080.25 , HORVU1Hr1G053080.22 , HORVU1Hr1G053080.23 , HORVU1Hr1G053080.20 , HORVU1Hr1G053080.21 , HORVU1Hr1G053080.28 , HORVU1Hr1G053080.29 , HORVU1Hr1G053080.9 , HORVU1Hr1G053080.8 , HORVU1Hr1G053080.7 , HORVU1Hr1G053080.6 , HORVU1Hr1G053080.5 , HORVU1Hr1G053080.4 , HORVU1Hr1G053080.3 , HORVU1Hr1G053080.2 , HORVU1Hr1G053080.1 , HORVU1Hr1G053080.30 , HORVU1Hr1G053080.34 , HORVU1Hr1G053080.18 , HORVU1Hr1G053080.17 , HORVU1Hr1G053080.16 , HORVU1Hr1G053080.11 , HORVU1Hr1G053080.19 , HORVU1Hr1G053080.15 , HORVU1Hr1G053080.14 , HORVU1Hr1G053080.13 , HORVU1Hr1G053080.12 , HORVU1Hr1G053080.10 , HORVU1Hr1G053080.31 , HORVU1Hr1G053080.33 , HORVU1Hr1G053080.32 , HORVU1Hr1G053080.35 , HORVU1Hr1G053080.36
Wheat TraesCS1B02G220700 , TraesCS1B02G220700 , TraesCS1A02G206900 , TraesCS1A02G206900 , TraesCS1D02G210200
Populus -


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cDNA sequences
Sobic.001G308200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G309300 expressed protein -
2 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
3 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
4 Sobic.006G010900 expressed protein -
5 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
6 Sobic.006G256600 expressed protein -
7 Sobic.001G126300 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
8 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
9 Sobic.004G011300 S1 RNA binding domain containing protein, expressed -
10 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
11 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
12 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
13 Sobic.004G012900 expressed protein -
14 Sobic.001G291900 expressed protein -
15 Sobic.004G094100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@GATA zinc finger domain containing protein, expressed -
16 Sobic.001G516901 - -
17 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
18 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
19 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
20 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase


Gene co-expression network
sample Sobic001G308200 Sobic001G308200 Sobic001G309300 Sobic001G309300 Sobic001G308200--Sobic001G309300 Sobic010G255100 Sobic010G255100 Sobic001G308200--Sobic010G255100 Sobic006G106400 Sobic006G106400 Sobic001G308200--Sobic006G106400 Sobic006G010900 Sobic006G010900 Sobic001G308200--Sobic006G010900 Sobic008G073100 Sobic008G073100 Sobic001G308200--Sobic008G073100 Sobic006G256600 Sobic006G256600 Sobic001G308200--Sobic006G256600 Sobic001G126300 Sobic001G126300 Sobic001G308200--Sobic001G126300 Sobic004G336000 Sobic004G336000 Sobic001G308200--Sobic004G336000 Sobic004G011300 Sobic004G011300 Sobic001G308200--Sobic004G011300 Sobic001G309300--Sobic008G073100 Sobic001G309300--Sobic004G336000 Sobic009G059300 Sobic009G059300 Sobic001G309300--Sobic009G059300 Sobic003G387100 Sobic003G387100 Sobic001G309300--Sobic003G387100 Sobic005G110400 Sobic005G110400 Sobic001G309300--Sobic005G110400 Sobic004G331700 Sobic004G331700 Sobic001G309300--Sobic004G331700 Sobic001G291900 Sobic001G291900 Sobic001G309300--Sobic001G291900 Sobic004G012900 Sobic004G012900 Sobic001G309300--Sobic004G012900 Sobic001G309300--Sobic001G308200 Sobic010G255100--Sobic006G256600 Sobic003G085000 Sobic003G085000 Sobic010G255100--Sobic003G085000 Sobic001G382800 Sobic001G382800 Sobic010G255100--Sobic001G382800 Sobic006G055800 Sobic006G055800 Sobic010G255100--Sobic006G055800 Sobic005G014700 Sobic005G014700 Sobic010G255100--Sobic005G014700 Sobic003G128400 Sobic003G128400 Sobic010G255100--Sobic003G128400 Sobic006G210400 Sobic006G210400 Sobic010G255100--Sobic006G210400 Sobic010G255100--Sobic001G308200 Sobic001G102500 Sobic001G102500 Sobic010G255100--Sobic001G102500 Sobic006G106400--Sobic004G011300 Sobic006G106400--Sobic008G073100 Sobic008G039600 Sobic008G039600 Sobic006G106400--Sobic008G039600 Sobic001G368500 Sobic001G368500 Sobic006G106400--Sobic001G368500 Sobic005G143500 Sobic005G143500 Sobic006G106400--Sobic005G143500 Sobic002G401800 Sobic002G401800 Sobic006G106400--Sobic002G401800 Sobic001G283700 Sobic001G283700 Sobic006G106400--Sobic001G283700 Sobic009G148500 Sobic009G148500 Sobic006G106400--Sobic009G148500 Sobic002G272100 Sobic002G272100 Sobic006G106400--Sobic002G272100 Sobic001G069000 Sobic001G069000 Sobic006G010900--Sobic001G069000 Sobic006G010900--Sobic003G387100 Sobic006G010900--Sobic006G210400 Sobic003G160800 Sobic003G160800 Sobic006G010900--Sobic003G160800 Sobic007G085800 Sobic007G085800 Sobic006G010900--Sobic007G085800 Sobic006G207800 Sobic006G207800 Sobic006G010900--Sobic006G207800 Sobic008G116300 Sobic008G116300 Sobic006G010900--Sobic008G116300 Sobic003G077400 Sobic003G077400 Sobic006G010900--Sobic003G077400 Sobic003G412900 Sobic003G412900 Sobic006G010900--Sobic003G412900 Sobic008G073100--Sobic005G110400 Sobic008G073100--Sobic001G368500 Sobic008G073100--Sobic002G401800 Sobic008G073100--Sobic003G387100 Sobic004G336200 Sobic004G336200 Sobic008G073100--Sobic004G336200 Sobic008G073100--Sobic001G309300 Sobic008G073100--Sobic003G077400 Sobic008G073100--Sobic002G272100 Sobic008G073100--Sobic006G106400 Sobic006G256600--Sobic010G255100 Sobic006G256600--Sobic003G085000 Sobic006G256600--Sobic001G291900 Sobic006G256600--Sobic006G210400 Sobic002G297400 Sobic002G297400 Sobic006G256600--Sobic002G297400 Sobic006G256600--Sobic006G055800 Sobic005G002900 Sobic005G002900 Sobic006G256600--Sobic005G002900 Sobic006G256600--Sobic001G309300 Sobic004G065300 Sobic004G065300 Sobic006G256600--Sobic004G065300 Sobic001G126300--Sobic005G110400 Sobic001G126300--Sobic008G073100 Sobic001G495200 Sobic001G495200 Sobic001G126300--Sobic001G495200 Sobic001G126300--Sobic003G160800 Sobic001G126300--Sobic009G148500 Sobic001G126300--Sobic003G387100 Sobic009G175500 Sobic009G175500 Sobic001G126300--Sobic009G175500 Sobic001G126300--Sobic004G336200 Sobic003G301300 Sobic003G301300 Sobic001G126300--Sobic003G301300 Sobic004G336000--Sobic001G309300 Sobic004G336000--Sobic001G495200 Sobic004G336000--Sobic008G073100 Sobic004G336000--Sobic001G291900 Sobic003G432500 Sobic003G432500 Sobic004G336000--Sobic003G432500 Sobic004G336000--Sobic006G055800 Sobic004G336000--Sobic004G011300 Sobic004G336000--Sobic003G085000 Sobic004G336000--Sobic003G387100 Sobic004G011300--Sobic006G106400 Sobic004G011300--Sobic009G148500 Sobic004G011300--Sobic001G495200 Sobic004G011300--Sobic004G336000 Sobic002G181000 Sobic002G181000 Sobic004G011300--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic004G011300--Sobic002G043600 Sobic004G011300--Sobic008G039600 Sobic004G011300--Sobic008G073100 Sobic004G011300--Sobic003G301300
Octagon: transcription factors


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