Gene annotation
Transcriptome id Sobic.006G210400.1,Sobic.006G210400.3,Sobic.006G210400.5,Sobic.006G210400.4,Sobic.006G210400.6,Sobic.006G210400.2
Synonym MAP1C, MAP1B, Sb06g028100
Functional annotation peptidase, M24 family protein, putative, expressed
UniProt C5YFM5 , A0A1Z5RG12 , A0A1Z5RFT6 , A0A1Z5REY1 , A0A1Z5RF22
Pfam PF00557
Panther DB PTHR10804 PTHR10804:SF68 PTHR10804:SF68 PTHR10804
NCBI CDD KOG2738; Putative methionine aminopeptidase
KEGG Orthology K01265; methionyl aminopeptidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13270 : methionine aminopeptidase 1B
RAP-DB (Rice) LOC_Os04g52100.1 : peptidase, M24 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a009841
Brachypodium KQJ84498
Barley HORVU2Hr1G099850.20 , HORVU2Hr1G099850.21 , HORVU2Hr1G099850.1 , HORVU2Hr1G099850.3 , HORVU2Hr1G099850.2 , HORVU2Hr1G099850.5 , HORVU2Hr1G099850.4 , HORVU2Hr1G099850.7 , HORVU2Hr1G099850.6 , HORVU2Hr1G099850.9 , HORVU2Hr1G099850.15 , HORVU2Hr1G099850.14 , HORVU2Hr1G099850.17 , HORVU2Hr1G099850.16 , HORVU2Hr1G099850.11 , HORVU2Hr1G099850.10 , HORVU2Hr1G099850.13 , HORVU2Hr1G099850.12 , HORVU2Hr1G099850.19 , HORVU2Hr1G099850.18
Wheat TraesCS2B02G448000 , TraesCS2B02G448000 , TraesCS2D02G425600 , TraesCS2D02G425600 , TraesCS2A02G427600 , TraesCS2A02G427600
Populus -


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cDNA sequences
Sobic.006G210400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G010900 expressed protein -
2 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
3 Sobic.006G256600 expressed protein -
4 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
5 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
7 Sobic.001G309300 expressed protein -
8 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
9 Sobic.001G124800 expressed protein -
10 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
11 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
12 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
13 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
14 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
15 Sobic.003G343400 sufB/sufD domain containing protein, putative, expressed -
16 Sobic.004G357300 uncharacterized ACR, COG1399 family protein, expressed -
17 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
18 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
19 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
20 Sobic.001G186200 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic006G210400 Sobic006G210400 Sobic006G010900 Sobic006G010900 Sobic006G210400--Sobic006G010900 Sobic007G085800 Sobic007G085800 Sobic006G210400--Sobic007G085800 Sobic006G256600 Sobic006G256600 Sobic006G210400--Sobic006G256600 Sobic003G141100 Sobic003G141100 Sobic006G210400--Sobic003G141100 Sobic002G297400 Sobic002G297400 Sobic006G210400--Sobic002G297400 Sobic003G387100 Sobic003G387100 Sobic006G210400--Sobic003G387100 Sobic001G309300 Sobic001G309300 Sobic006G210400--Sobic001G309300 Sobic010G255100 Sobic010G255100 Sobic006G210400--Sobic010G255100 Sobic001G124800 Sobic001G124800 Sobic006G210400--Sobic001G124800 Sobic001G069000 Sobic001G069000 Sobic006G010900--Sobic001G069000 Sobic006G010900--Sobic003G387100 Sobic006G010900--Sobic006G210400 Sobic003G160800 Sobic003G160800 Sobic006G010900--Sobic003G160800 Sobic006G010900--Sobic007G085800 Sobic006G207800 Sobic006G207800 Sobic006G010900--Sobic006G207800 Sobic008G116300 Sobic008G116300 Sobic006G010900--Sobic008G116300 Sobic003G077400 Sobic003G077400 Sobic006G010900--Sobic003G077400 Sobic003G412900 Sobic003G412900 Sobic006G010900--Sobic003G412900 Sobic007G085800--Sobic006G210400 Sobic007G085800--Sobic006G010900 Sobic007G085800--Sobic003G412900 Sobic007G085800--Sobic008G116300 Sobic007G085800--Sobic001G069000 Sobic007G085800--Sobic003G387100 Sobic010G214100 Sobic010G214100 Sobic007G085800--Sobic010G214100 Sobic001G168800 Sobic001G168800 Sobic007G085800--Sobic001G168800 Sobic001G186200 Sobic001G186200 Sobic007G085800--Sobic001G186200 Sobic006G256600--Sobic010G255100 Sobic003G085000 Sobic003G085000 Sobic006G256600--Sobic003G085000 Sobic001G291900 Sobic001G291900 Sobic006G256600--Sobic001G291900 Sobic006G256600--Sobic006G210400 Sobic006G256600--Sobic002G297400 Sobic006G055800 Sobic006G055800 Sobic006G256600--Sobic006G055800 Sobic005G002900 Sobic005G002900 Sobic006G256600--Sobic005G002900 Sobic006G256600--Sobic001G309300 Sobic004G065300 Sobic004G065300 Sobic006G256600--Sobic004G065300 Sobic001G500600 Sobic001G500600 Sobic003G141100--Sobic001G500600 Sobic004G328400 Sobic004G328400 Sobic003G141100--Sobic004G328400 Sobic004G336200 Sobic004G336200 Sobic003G141100--Sobic004G336200 Sobic003G232700 Sobic003G232700 Sobic003G141100--Sobic003G232700 Sobic003G372900 Sobic003G372900 Sobic003G141100--Sobic003G372900 Sobic001G054100 Sobic001G054100 Sobic003G141100--Sobic001G054100 Sobic009G148500 Sobic009G148500 Sobic003G141100--Sobic009G148500 Sobic003G141100--Sobic003G160800 Sobic003G141100--Sobic005G002900 Sobic004G179200 Sobic004G179200 Sobic002G297400--Sobic004G179200 Sobic002G297400--Sobic006G055800 Sobic001G469933 Sobic001G469933 Sobic002G297400--Sobic001G469933 Sobic002G297400--Sobic006G256600 Sobic001G122400 Sobic001G122400 Sobic002G297400--Sobic001G122400 Sobic005G184300 Sobic005G184300 Sobic002G297400--Sobic005G184300 Sobic003G324700 Sobic003G324700 Sobic002G297400--Sobic003G324700 Sobic003G439000 Sobic003G439000 Sobic002G297400--Sobic003G439000 Sobic006G107600 Sobic006G107600 Sobic002G297400--Sobic006G107600 Sobic009G059300 Sobic009G059300 Sobic003G387100--Sobic009G059300 Sobic003G387100--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic003G387100--Sobic008G073100 Sobic003G387100--Sobic006G207800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G387100--Sobic004G012900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic001G309300--Sobic008G073100 Sobic004G336000 Sobic004G336000 Sobic001G309300--Sobic004G336000 Sobic001G309300--Sobic009G059300 Sobic001G309300--Sobic003G387100 Sobic001G309300--Sobic005G110400 Sobic004G331700 Sobic004G331700 Sobic001G309300--Sobic004G331700 Sobic001G309300--Sobic001G291900 Sobic001G309300--Sobic004G012900 Sobic001G308200 Sobic001G308200 Sobic001G309300--Sobic001G308200 Sobic010G255100--Sobic006G256600 Sobic010G255100--Sobic003G085000 Sobic001G382800 Sobic001G382800 Sobic010G255100--Sobic001G382800 Sobic010G255100--Sobic006G055800 Sobic005G014700 Sobic005G014700 Sobic010G255100--Sobic005G014700 Sobic003G128400 Sobic003G128400 Sobic010G255100--Sobic003G128400 Sobic010G255100--Sobic006G210400 Sobic010G255100--Sobic001G308200 Sobic001G102500 Sobic001G102500 Sobic010G255100--Sobic001G102500 Sobic001G124800--Sobic003G387100 Sobic002G102200 Sobic002G102200 Sobic001G124800--Sobic002G102200 Sobic006G101500 Sobic006G101500 Sobic001G124800--Sobic006G101500 Sobic004G054400 Sobic004G054400 Sobic001G124800--Sobic004G054400 Sobic001G124800--Sobic003G160800 Sobic001G124800--Sobic001G309300 Sobic002G112400 Sobic002G112400 Sobic001G124800--Sobic002G112400 Sobic010G058200 Sobic010G058200 Sobic001G124800--Sobic010G058200 Sobic001G124800--Sobic004G336200
Octagon: transcription factors


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