Gene annotation
Transcriptome id Sobic.006G256600.1
Synonym PGL34, Sb06g032010
Functional annotation expressed protein
UniProt C5YA00
Pfam PF04755
Panther DB PTHR31906 PTHR31906:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58010 : plastoglobulin 34kD
RAP-DB (Rice) LOC_Os04g57020.1 : expressed protein
MaizeGDB (Corn) Zm00025a009397 , Zm00025a057311
Brachypodium KQJ85170
Barley HORVU2Hr1G108990.2 , HORVU2Hr1G108990.1
Wheat TraesCS2B02G515500 , TraesCS2A02G487900 , TraesCS2D02G488200 , TraesCS2A02G487900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
2 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
3 Sobic.001G291900 expressed protein -
4 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
5 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
7 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
8 Sobic.001G309300 expressed protein -
9 Sobic.004G065300 CR084 protein, putative, expressed -
10 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
11 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
12 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
13 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
14 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
15 Sobic.001G447700 expressed protein -
16 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
17 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
18 Sobic.003G162900 expressed protein -
19 Sobic.001G283700 acyltransferase, putative, expressed K00630: glycerol-3-phosphate O-acyltransferase
20 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -


Gene co-expression network
sample Sobic006G256600 Sobic006G256600 Sobic010G255100 Sobic010G255100 Sobic006G256600--Sobic010G255100 Sobic003G085000 Sobic003G085000 Sobic006G256600--Sobic003G085000 Sobic001G291900 Sobic001G291900 Sobic006G256600--Sobic001G291900 Sobic006G210400 Sobic006G210400 Sobic006G256600--Sobic006G210400 Sobic002G297400 Sobic002G297400 Sobic006G256600--Sobic002G297400 Sobic006G055800 Sobic006G055800 Sobic006G256600--Sobic006G055800 Sobic005G002900 Sobic005G002900 Sobic006G256600--Sobic005G002900 Sobic001G309300 Sobic001G309300 Sobic006G256600--Sobic001G309300 Sobic004G065300 Sobic004G065300 Sobic006G256600--Sobic004G065300 Sobic010G255100--Sobic006G256600 Sobic010G255100--Sobic003G085000 Sobic001G382800 Sobic001G382800 Sobic010G255100--Sobic001G382800 Sobic010G255100--Sobic006G055800 Sobic005G014700 Sobic005G014700 Sobic010G255100--Sobic005G014700 Sobic003G128400 Sobic003G128400 Sobic010G255100--Sobic003G128400 Sobic010G255100--Sobic006G210400 Sobic001G308200 Sobic001G308200 Sobic010G255100--Sobic001G308200 Sobic001G102500 Sobic001G102500 Sobic010G255100--Sobic001G102500 Sobic003G085000--Sobic006G256600 Sobic003G085000--Sobic001G291900 Sobic003G085000--Sobic006G055800 Sobic003G085000--Sobic010G255100 Sobic004G336000 Sobic004G336000 Sobic003G085000--Sobic004G336000 Sobic001G531400 Sobic001G531400 Sobic003G085000--Sobic001G531400 Sobic003G085000--Sobic005G002900 Sobic001G104800 Sobic001G104800 Sobic003G085000--Sobic001G104800 Sobic003G085000--Sobic004G065300 Sobic001G368500 Sobic001G368500 Sobic001G291900--Sobic001G368500 Sobic001G291900--Sobic001G104800 Sobic001G291900--Sobic003G085000 Sobic001G291900--Sobic004G336000 Sobic001G291900--Sobic005G002900 Sobic009G059300 Sobic009G059300 Sobic001G291900--Sobic009G059300 Sobic001G291900--Sobic001G309300 Sobic001G291900--Sobic006G055800 Sobic006G106400 Sobic006G106400 Sobic001G291900--Sobic006G106400 Sobic006G010900 Sobic006G010900 Sobic006G210400--Sobic006G010900 Sobic007G085800 Sobic007G085800 Sobic006G210400--Sobic007G085800 Sobic006G210400--Sobic006G256600 Sobic003G141100 Sobic003G141100 Sobic006G210400--Sobic003G141100 Sobic006G210400--Sobic002G297400 Sobic003G387100 Sobic003G387100 Sobic006G210400--Sobic003G387100 Sobic006G210400--Sobic001G309300 Sobic006G210400--Sobic010G255100 Sobic001G124800 Sobic001G124800 Sobic006G210400--Sobic001G124800 Sobic004G179200 Sobic004G179200 Sobic002G297400--Sobic004G179200 Sobic002G297400--Sobic006G055800 Sobic001G469933 Sobic001G469933 Sobic002G297400--Sobic001G469933 Sobic002G297400--Sobic006G256600 Sobic001G122400 Sobic001G122400 Sobic002G297400--Sobic001G122400 Sobic005G184300 Sobic005G184300 Sobic002G297400--Sobic005G184300 Sobic003G324700 Sobic003G324700 Sobic002G297400--Sobic003G324700 Sobic003G439000 Sobic003G439000 Sobic002G297400--Sobic003G439000 Sobic006G107600 Sobic006G107600 Sobic002G297400--Sobic006G107600 Sobic003G432500 Sobic003G432500 Sobic006G055800--Sobic003G432500 Sobic006G055800--Sobic003G324700 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic006G055800--Sobic001G368500 Sobic009G148500 Sobic009G148500 Sobic006G055800--Sobic009G148500 Sobic002G152800 Sobic002G152800 Sobic006G055800--Sobic002G152800 Sobic001G083100 Sobic001G083100 Sobic006G055800--Sobic001G083100 Sobic005G110400 Sobic005G110400 Sobic006G055800--Sobic005G110400 Sobic005G002900--Sobic001G083100 Sobic005G002900--Sobic006G055800 Sobic005G002900--Sobic009G148500 Sobic005G002900--Sobic001G469933 Sobic005G002900--Sobic001G291900 Sobic005G002900--Sobic006G106400 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic002G131700 Sobic002G131700 Sobic005G002900--Sobic002G131700 Sobic008G073100 Sobic008G073100 Sobic001G309300--Sobic008G073100 Sobic001G309300--Sobic004G336000 Sobic001G309300--Sobic009G059300 Sobic001G309300--Sobic003G387100 Sobic001G309300--Sobic005G110400 Sobic004G331700 Sobic004G331700 Sobic001G309300--Sobic004G331700 Sobic001G309300--Sobic001G291900 Sobic004G012900 Sobic004G012900 Sobic001G309300--Sobic004G012900 Sobic001G309300--Sobic001G308200 Sobic004G065300--Sobic001G368500 Sobic004G065300--Sobic006G055800 Sobic004G065300--Sobic003G432500 Sobic004G065300--Sobic005G110400 Sobic004G065300--Sobic003G324700 Sobic004G065300--Sobic006G256600 Sobic004G065300--Sobic005G002900 Sobic004G065300--Sobic001G469933 Sobic004G065300--Sobic002G297400
Octagon: transcription factors


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