Gene annotation
Transcriptome id Sobic.006G055800.1
Synonym Sb06g014410, HCF106
Functional annotation mttA/Hcf106 family protein, putative, expressed
UniProt C5YEW9
Pfam PF02416
Panther DB PTHR33162 PTHR33162:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0015031; protein transport GO:0008565obsolete protein transporter activity


Orthologs (automatic annotation)
TAIR AT5G52440 : Bacterial sec-independent translocation protein mttA/Hcf106
RAP-DB (Rice) LOC_Os11g37130.1 : mttA/Hcf106 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011701 , Zm00025a055935
Brachypodium KQK18242 , KQK18243 , KQK18241
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
2 Sobic.003G324700 expressed protein -
3 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
4 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
5 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
6 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
7 Sobic.002G152800 RNA recognition motif containing protein, putative, expressed -
8 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
9 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
10 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -
11 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
12 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
13 Sobic.001G291900 expressed protein -
14 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
15 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
16 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
17 Sobic.002G109000 tetratricopeptide repeat containing protein, putative, expressed -
18 Sobic.003G271900 expressed protein -
19 Sobic.006G256600 expressed protein -
20 Sobic.004G065300 CR084 protein, putative, expressed -


Gene co-expression network
sample Sobic006G055800 Sobic006G055800 Sobic003G432500 Sobic003G432500 Sobic006G055800--Sobic003G432500 Sobic003G324700 Sobic003G324700 Sobic006G055800--Sobic003G324700 Sobic005G002900 Sobic005G002900 Sobic006G055800--Sobic005G002900 Sobic001G469933 Sobic001G469933 Sobic006G055800--Sobic001G469933 Sobic001G368500 Sobic001G368500 Sobic006G055800--Sobic001G368500 Sobic009G148500 Sobic009G148500 Sobic006G055800--Sobic009G148500 Sobic002G152800 Sobic002G152800 Sobic006G055800--Sobic002G152800 Sobic001G083100 Sobic001G083100 Sobic006G055800--Sobic001G083100 Sobic005G110400 Sobic005G110400 Sobic006G055800--Sobic005G110400 Sobic003G432500--Sobic001G368500 Sobic003G432500--Sobic006G055800 Sobic003G432500--Sobic001G469933 Sobic003G271900 Sobic003G271900 Sobic003G432500--Sobic003G271900 Sobic003G432500--Sobic005G110400 Sobic003G432500--Sobic003G324700 Sobic008G073100 Sobic008G073100 Sobic003G432500--Sobic008G073100 Sobic004G336000 Sobic004G336000 Sobic003G432500--Sobic004G336000 Sobic003G432500--Sobic002G152800 Sobic001G122400 Sobic001G122400 Sobic003G324700--Sobic001G122400 Sobic003G324700--Sobic001G368500 Sobic003G324700--Sobic001G469933 Sobic004G335800 Sobic004G335800 Sobic003G324700--Sobic004G335800 Sobic003G324700--Sobic006G055800 Sobic003G324700--Sobic002G152800 Sobic003G386300 Sobic003G386300 Sobic003G324700--Sobic003G386300 Sobic003G324700--Sobic003G432500 Sobic001G527100 Sobic001G527100 Sobic003G324700--Sobic001G527100 Sobic005G002900--Sobic001G083100 Sobic005G002900--Sobic006G055800 Sobic005G002900--Sobic009G148500 Sobic005G002900--Sobic001G469933 Sobic001G291900 Sobic001G291900 Sobic005G002900--Sobic001G291900 Sobic006G106400 Sobic006G106400 Sobic005G002900--Sobic006G106400 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic002G131700 Sobic002G131700 Sobic005G002900--Sobic002G131700 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic001G469933--Sobic003G324700 Sobic003G077400 Sobic003G077400 Sobic001G469933--Sobic003G077400 Sobic001G469933--Sobic006G055800 Sobic001G469933--Sobic003G432500 Sobic001G469933--Sobic004G335800 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400 Sobic001G368500--Sobic003G324700 Sobic001G368500--Sobic005G110400 Sobic001G368500--Sobic003G432500 Sobic001G368500--Sobic001G469933 Sobic001G368500--Sobic001G122400 Sobic001G368500--Sobic008G073100 Sobic002G401800 Sobic002G401800 Sobic001G368500--Sobic002G401800 Sobic001G368500--Sobic003G271900 Sobic005G143500 Sobic005G143500 Sobic001G368500--Sobic005G143500 Sobic009G148500--Sobic001G083100 Sobic003G151500 Sobic003G151500 Sobic009G148500--Sobic003G151500 Sobic009G148500--Sobic008G073100 Sobic009G148500--Sobic006G055800 Sobic001G126300 Sobic001G126300 Sobic009G148500--Sobic001G126300 Sobic004G011300 Sobic004G011300 Sobic009G148500--Sobic004G011300 Sobic009G148500--Sobic005G002900 Sobic009G148500--Sobic005G110400 Sobic001G500600 Sobic001G500600 Sobic009G148500--Sobic001G500600 Sobic002G152800--Sobic003G324700 Sobic002G152800--Sobic004G335800 Sobic002G152800--Sobic006G055800 Sobic002G152800--Sobic001G469933 Sobic002G152800--Sobic001G368500 Sobic002G152800--Sobic003G432500 Sobic007G090400 Sobic007G090400 Sobic002G152800--Sobic007G090400 Sobic002G214600 Sobic002G214600 Sobic002G152800--Sobic002G214600 Sobic002G152800--Sobic001G122400 Sobic001G083100--Sobic005G002900 Sobic001G083100--Sobic009G148500 Sobic008G039600 Sobic008G039600 Sobic001G083100--Sobic008G039600 Sobic001G083100--Sobic001G469933 Sobic001G083100--Sobic006G055800 Sobic002G272100 Sobic002G272100 Sobic001G083100--Sobic002G272100 Sobic003G372900 Sobic003G372900 Sobic001G083100--Sobic003G372900 Sobic001G054100 Sobic001G054100 Sobic001G083100--Sobic001G054100 Sobic001G083100--Sobic008G073100 Sobic005G110400--Sobic008G073100 Sobic005G110400--Sobic001G368500 Sobic005G110400--Sobic001G126300 Sobic005G110400--Sobic002G401800 Sobic004G336200 Sobic004G336200 Sobic005G110400--Sobic004G336200 Sobic003G387100 Sobic003G387100 Sobic005G110400--Sobic003G387100 Sobic005G110400--Sobic005G143500 Sobic005G110400--Sobic003G077400 Sobic005G110400--Sobic003G432500
Octagon: transcription factors


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